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View Structure Prediction Details

Protein: MAP1C_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAP1C_ARATH.

Description E-value Query
Range
Subject
Range
gi|11320958 - gi|11320958|gb|AAG33976.1|AF250962_1 methionine aminopeptidase-like protein [Arabidopsis thaliana]
299.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQKISQSIS LCNGDQFKPL IYLAGAPTNF ISSPLSGKKK SSSLRIKRIQ QLQSTLEDRI  60
   61 NPPLVCGTVS PRLSVPDHIL KPLYVESSKV PEISSELQIP DSIGIVKMKK ACELAARVLD 120
  121 YAGTLVRPFV TTDEIDKAVH QMVIEFGAYP SPLGYGGFPK SVCTSVNECM FHGIPDSRPL 180
  181 QNGDIINIDV AVYLDGYHGD TSKTFLCGDV NGSLKQLVKV TEECLEKGIS VCKDGASFKQ 240
  241 IGKIISEHAA KYGYNMERFI GHGVGTVLHS EPLIYLHSNY DYELEYMIEG QTFTLEPILT 300
  301 IGTTEFVTWP DKWTIVTADG GPAAQFEHTI LITTTGAEIL TISS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 2g6pA
Description: No description for 2g6pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle