YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RH41_ARATH
Organism: Arabidopsis thaliana
Length: 505 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH41_ARATH.

Description E-value Query
Range
Subject
Range
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
338.0 [0..56] [493..114]

Back

Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEEGCVPHN SDVVKQKSID QRAPLSGEPK CVICSRYGEY ICDETNDDVC SLECKQALLR  60
   61 RVDSA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.39
Match: 2yqpA
Description: No description for 2yqpA was found.

Predicted Domain #2
Region A:
Residues: [66-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVFPATDECF YVRDPGSSSH DAQLLRRKLD IHVQGQGSAV PPPVLTFTSC GLPPKLLLNL  60
   61 ETAGYDFPTP IQMQAIPAAL TGKSLLASAD TGSGKTASFL VPIISRCTTY HSEHPSDQRR 120
  121 NPLAMVLAPT RELCVQVEDQ AKMLGKGLPF KTALVVGGDP MSGQLYRIQQ GVELIIGTPG 180
  181 RVVDLLSKHT IELDNIMTFV LDEVDCMLQR GFRDQVMQIF QALSQPQVLL FSATISREVE 240
  241 KVGGSLAKEI ILVSIGNPNK PNKAVNQLAI WVDAKQKKQK LFDILRSQNH FKPPAVVYVS 300
  301 SRVGADLLAN AITVVTGVKA LSIHGEKPMK ERRDVMGSFL GGEVPVLVST GVLGRGVDLL 360
  361 VVRQVIVFDM PSTIKEYIHV IGRASRMGEK GTAIVFVNED DRNLFPDLVA ALKSSGAAIP 420
  421 KELINLTSRE MHNKKRRVGY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.09691
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle