YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30679432, gi|...
Organism: Arabidopsis thaliana
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30679432, gi|....

Description E-value Query
Range
Subject
Range
gi|91083753 - gi|91083753|ref|XP_971465.1| PREDICTED: similar to Tubulin tyrosine ligase-like protein 2 (Testis-sp...
399.0 [0..33] [573..316]

Back

Predicted Domain #1
Region A:
Residues: [1-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL  60
   61 VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM GGNNKPKGGK ESNQVKGKAG 120
  121 GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE 180
  181 DDEFSEDDYD DEDFSEDDYD DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM 240
  241 PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK 300
  301 KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN 360
  361 KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK HSKGGGGGGN KGNHNHSAKG 420
  421 IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM 480
  481 SGGGGYYPGP PQASQQMNQQ QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA 540
  541 RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle