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View Structure Prediction Details

Protein: FTSI2_ARATH
Organism: Arabidopsis thaliana
Length: 876 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FTSI2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACRFPLHSS SPSQFLSPEN RQRLPRNYPS ISCQNNSATN VVHEDGDDND KAKTNQVNLL  60
   61 AIPITLTIIS ASLAKPSFAA AKVTERKRTQ KKPQEALTLE QLKAWSKDLP VVSNRIPYTD 120
  121 ILSLKAEGKL KHVIKPPNLS LRQKAEPVLV VLEDSRVLRT VLPSLEGNKR FWEQWDELGI 180
  181 DVQCVNAYTP PVKRPPVPSP YLGFLWKVPA YMLTWVKPKK ESKRAAELKR MREDFKRQRK 240
  241 EEIETMKEER VMMEKTMKAQ KKQQERKKRK AVRKKKYEES LREARKNYRD MADMWARLAQ 300
  301 DPNVATALGL VFFYIFYRVV VLNYRKQKKD YEDRLKIEKA EADERKKMRE LEREMEGIEE 360
  361 EDEEVEEGTG EKNPYLQMAM QFMKSGARVR RASNKRLPEY LERGVDVKFT DVAGLGKIRL 420
  421 ELEEIVKFFT HGEMYRRRGV KIPGGILLCG PPGVGKTLLA KAVAGEAGVN FFSISASQFV 480
  481 EIYVGVGASR VRALYQEARE NAPSVVFIDE LDAVGRERGL IKGSGGQERD ATLNQLLVSL 540
  541 DGFEGRGEVI TIASTNRPDI LDPALVRPGR FDRKIFIPKP GLIGRMEILQ VHARKKPMAE 600
  601 DLDYMAVASM TDGMVGAELA NIVEIAAINM MRDGRTELTT DDLLQAAQIE ERGMLDRKDR 660
  661 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [661-876]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLETWRQVAI NEAAMAVVAV NFPDMKNIEF LTINPRAGRE LGYVRVKMDH IKFKEGMLSR  60
   61 QSILDHITVQ LAPRAADELW YGEDQLSTIW AETSDNARSA ARSLVLGGLS DKHHGLNNFW 120
  121 VADRINDIDV EALRILNMCY ERAKEILGRN RTLMDEVVEK LVQKKSLTKQ EFFTLVELYG 180
  181 SSKPMPPSIL ELRKIKRLEL EEMVLKLDMT TARNSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle