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View Structure Prediction Details

Protein: gi|42571237, gi|...
Organism: Arabidopsis thaliana
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571237, gi|....

Description E-value Query
Range
Subject
Range
CDS4_ARATH - Phosphatidate cytidylyltransferase 4, chloroplastic OS=Arabidopsis thaliana GN=CDS4 PE=1 SV=1
300.0 [0..1] [382..1]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFAELVLS TSRCTCPCRS FTRKPLIRPP LSGLRLPGDT KPLFRSGLGR ISVSRRFLTA  60
   61 VARAESDQLG DDDHSKNVED KQKKASQLKK RVIFGIGIGL PVGCVVLAGG WVFTVALASS 120
  121 VFIGSREYFE LVRSRGIAKG MTPPPRYVSR VCSVICALMP ILTLYFGNID ILVTSAAFVV 180
  181 AIALLVQRGS PRFAQLSSTM FGLFYCGYLP SFWVKLRCGL AAPALNTGIG RTWPILLGG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [240-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAHWTVGLVA TLISFSGVIA TDTFAFLGGK TFGRTPLTSI SPKKTWEGTI VGLVGCIAIT  60
   61 ILLSKYLSWP QSLFSSVAFG FLNFFGSVFG DLTESMIKRD AGVKDSGSLI PGHGGILDRV 120
  121 DSYIFTGALA YSFIKTSLKL YGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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