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View Structure Prediction Details

Protein: CAN2_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAN2_ARATH.

Description E-value Query
Range
Subject
Range
Y38K_CAPSE - Uncharacterized 38.1 kDa protein OS=Capnoides sempervirens PE=2 SV=1
406.0 [0..1] [331..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNALTFLYG KCCKPTTTDD SLGPHGVSAA TVGVSALAHD LFNFEITSQV PEGLGRYVQS  60
   61 SRKAQANWYR KILEAWKQAK PPPQTAEEAS RLVTDILKRN QKADVEGLLS FYGLPLSHTL 120
  121 VEVTVEAPVS LPEGILFEFQ TLPVDPKAVA DGDTITVYVS TSEPVVSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVPREVNLAA VQRAKAREKR NYPKADELHQ KIIDSGYRVL NIENEEVLAR KFRIRLRGID  60
   61 APESQMPFGK EAQEGLLKIV GRKSLKVLVY GEDQYGRCVG DLYCNGIFVQ EAMLKKGLAW 120
  121 HYLAYDKRPV LAKWEKEARQ KRIGLWASSN PEKPWDWRKN NRRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2f0uA
Description: No description for 2f0uA was found.

YRC Informatics Platform - Version 3.0
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