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View Structure Prediction Details

Protein: gi|30680514
Organism: Arabidopsis thaliana
Length: 601 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30680514.

Description E-value Query
Range
Subject
Range
gi|13487070, gi|... - gi|20197042|gb|AAM14891.1| F-box protein LKP2/ADO2, AtFBX2c [Arabidopsis thaliana], gi|13487070|gb|A...
354.0 [0..5] [601..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNQMEWDSD SDLSGGDEVA EDGWFGGDNG AIPFPVGSLP GTAPCGFVVS DALEPDNPII  60
   61 YVNTVFEIVT GYRAEEVIGP FTKRRHPMVD STIVAKMRQC LENGIEFQGE LLNFRKDGSP 120
  121 LMNKLRLVPI R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.154902
Match: 2pr5A
Description: No description for 2pr5A was found.

Predicted Domain #2
Region A:
Residues: [132-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEDEITHFIG VLLFTDAKID LGPSPDLSAK EIPRISRSFT SALPIGERNV SRGLCGIFEL  60
   61 SDEVIAIKIL SQLTPGDIAS VGCVCRRLNE LTKNDDVWRM VCQNTWGTEA TRVLESVPGA 120
  121 KRIGWVRLAR EFTTH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.88
Match: 2e31A
Description: No description for 2e31A was found.

Predicted Domain #3
Region A:
Residues: [267-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EATAWRKFSV GGTVEPSRCN FSACAVGNRI VIFGGEGVNM QPMNDTFVLD LGSSSPEWKS  60
   61 VLVSSPPPGR WGHTLSCVNG SRLVVFGGYG SHGLLNDVFL LDLDADPPSW REVSGLAPPI 120
  121 PRSWHSSCTL DGTKLIVSGG CADSGALLSD TFLLDLSMDI PAWREIPVPW TPPSRLGHTL 180
  181 TVYGDRKILM FGGLAKNGTL RFRSNDVYTM DLSEDEPSWR PVIGYGSSLP GGMAAPPPRL 240
  241 DHVAISLPGG RILIFGGSVA GLDSASQLYL LDPNEEKPAW RILNVQGGPP RFAWGHTTCV 300
  301 VGGTRLVVLG GQTGEEWMLN EAHELLLATS TTAST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1u6dX
Description: Crystal structure of the Kelch domain of human Keap1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle