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View Structure Prediction Details

Protein: gln-3
Organism: Caenorhabditis elegans
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gln-3.

Description E-value Query
Range
Subject
Range
gi|157754601 - gi|157754601|ref|XP_001669644.1| Hypothetical protein CBG13820 [Caenorhabditis briggsae AF16]
gi|187028436, gi... - gi|39588238|emb|CAE68163.1| Hypothetical protein CBG13820 [Caenorhabditis briggsae], gi|187028436|em...
408.0 [0..1] [385..1]

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Predicted Domain #1
Region A:
Residues: [1-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSLRSQFA TDKQVLQKFL NLDQKGMYQA LYIWIDGSGE NIRAKTRTFD FEPTDPEKLP  60
   61 IWNFDGSSTG QAEGADSDVY LKPVAIYPDP FRQGKNKLVM CETYDNKKKP TATNYRQRCK 120
  121 EVMEKAADQH PWFGMEQEYT LLDIDGHPFG WPKNGFPGPQ GPYYCGVGAN KVYGRDIVEA 180
  181 HYRACLYAGI QISGTNAEVM PGQWEFQVGP CEGIQMGDQL WVARYLLQRV AEEFGVIASF 240
  241 DCKPIKGDWN GAGCHTNFST DKMRNPGGID EIMSAINKLS LVHPQHIAYY DPHGGKDNER 300
  301 RLTGLHETAS IDKFSYGVAS RASSIRIPRS TDDDGYGYFE DRRPSSNCDP YTVTGALVRT 360
  361 VCLEGAERKL SMMYVPSQAP NITKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2uu7A
Description: No description for 2uu7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle