YRC Public Data Repository

Run Information:

Bait Protein:	MLP2
Organism:	Saccharomyces cerevisiae
Publication:	Keck JM, Jones MH, Wong CC, Binkley J, Chen D, Jaspersen SL, Holinger EP, Xu T, Niepel M, Rout MP, Vogel J, Sidow A, Yates JR, Winey M., A Cell Cycle Phosphoproteome of the Yeast Centrosome, Science 24 June 2011: 1557-1561.
Comments:	#32 Asynchronous Prep-No Phosphopeptide enrichment
Raw Data:	Download DTASelect Filter text

UNFILTERED Run Results: [filter] [View our MS interpretation guidelines.]
	Hit Protein	Protein Desc	Sequence Count	Spectrum Count	Sequence Coverage	NSAF	Mol. Wt.
[View Peptides]	MLP2	Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the...	188	401	49.8%	0.0271	195140
[View Peptides]	SPC110	Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nu...	131	350	55.5%	0.042	111782
[View Peptides]	NUD1	Component of the spindle pole body outer plaque, required for exit from mitosis	95	261	34.3%	0.0347	94104
[View Peptides]	CNM67	Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclea...	68	111	53.2%	0.0216	67400
[View Peptides]	SPC42	Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate att...	59	87	74.9%	0.0271	42271
[View Peptides]	TDH3	Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tet...	35	54	34.0%	0.0184	35747
[View Peptides]	PMA1	Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plas...	35	58	23.5%	0.00716	99619
[View Peptides]	BFA1	Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pa...	32	64	35.4%	0.0126	66087
[View Peptides]	CDC14	Protein phosphatase required for mitotic exit; located in the nucleolus until liberated by the FEAR ...	31	62	32.1%	0.0127	61907
[View Peptides]	CDC31	Calcium-binding component of the spindle pole body (SPB) half-bridge, required for SPB duplication i...	29	41	72.0%	0.0288	18751
[View Peptides]	SPC29	Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inn...	29	50	60.1%	0.0224	29280
[View Peptides]	TDH2	Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tet...	26	40	32.8%	0.0136	35847
[View Peptides]	PDC1	Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates...	26	40	25.9%	0.00805	61495
[View Peptides]	BUB2	Mitotic exit network regulator, forms GTPase-activating Bfa1p-Bub2p complex that binds Tem1p and spi...	23	51	38.6%	0.0189	35028
[View Peptides]	YIL002W-A	Putative protein of unknown function; identified by expression profiling and mass spectrometry	21	37	53.6%	0.0607	7729
[View Peptides]	CDC19	Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat...	21	44	30.0%	0.00997	54545
[View Peptides]	NOP1	Nucleolar protein, component of the small subunit processome complex, which is required for processi...	19	38	24.8%	0.0132	34465
[View Peptides]	YGR027W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	18	20	10.8%	0.00129	198656
[View Peptides]	TEF1, TEF2	Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ...	17	23	22.3%	0.00569	50033
[View Peptides]	YEF3	Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes b...	16	20	12.0%	0.00217	115945
[View Peptides]	RPP0	Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphoryl...	15	35	26.9%	0.0127	33717
[View Peptides]	TUB4	Gamma-tubulin, involved in nucleating microtubules from both the cytoplasmic and nuclear faces of th...	15	25	25.2%	0.00599	52628
[View Peptides]	HSL7	Protein arginine N-methyltransferase that exhibits septin and Hsl1p-dependent bud neck localization ...	15	19	16.8%	0.0026	95153
[View Peptides]	YER160C	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	15	17	7.6%	0.0011	198568
[View Peptides]	EFT2, EFT1	Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein s...	14	16	12.5%	0.00215	93289
[View Peptides]	CMD1	Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act...	13	17	40.8%	0.0131	16135
[View Peptides]	NOP58	Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the ...	13	16	13.3%	0.00355	56956
[View Peptides]	SSB1	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, functions with J-protein partn...	12	14	20.2%	0.00259	66602
[View Peptides]	ENO2	Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosp...	12	16	19.0%	0.00415	46914
[View Peptides]	MPS2	Essential membrane protein localized at the nuclear envelope and spindle pole body (SPB), required f...	12	22	17.8%	0.00644	44585
[View Peptides]	GAR1	Protein component of the H/ACA snoRNP pseudouridylase complex, involved in the modification and clea...	12	23	8.3%	0.0127	21480
[View Peptides]	SSA2	ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shoc...	11	12	15.5%	0.00213	69470
[View Peptides]	NDC1	Nuclear envelope protein with multiple putative transmembrane domains, required for nuclear pore com...	11	12	11.0%	0.00208	74134
[View Peptides]	YBR012W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	11	12	7.0%	7.74E-4	198868
[View Peptides]	BBP1	Protein required for the spindle pole body (SPB) duplication, localized at the central plaque periph...	10	11	22.1%	0.00324	45384
[View Peptides]	MRH1	Protein that localizes primarily to the plasma membrane, also found at the nuclear envelope; the aut...	10	12	18.1%	0.00425	36191
[View Peptides]	MLP1	Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the...	10	11	4.2%	6.65E-4	218454
[View Peptides]	GPM1	Tetrameric phosphoglycerate mutase, mediates the conversion of 3-phosphoglycerate to 2-phosphoglycer...	9	11	27.5%	0.00504	27609
[View Peptides]	NOP56	Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that ...	9	14	16.3%	0.00315	56864
[View Peptides]	SPC72	Component of the cytoplasmic Tub4p (gamma-tubulin) complex, binds spindle pole bodies and links them...	9	9	12.7%	0.00164	72105
[View Peptides]	SFI1	Centrin (Cdc31p)-binding protein required for spindle pole body (SPB) duplication, localizes to the ...	9	13	8.9%	0.00156	112978
[View Peptides]	RPL5	Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 rib...	8	10	19.2%	0.00381	33715
[View Peptides]	HXT7	High-affinity glucose transporter of the major facilitator superfamily, nearly identical to Hxt6p, e...	8	8	9.5%	0.00159	62735
[View Peptides]	URA2	Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes t...	8	9	4.4%	4.6E-4	245123
[View Peptides]	NBP1	Spindle pole body (SPB) component, required for the insertion of the duplication plaque into the nuc...	7	8	26.3%	0.00284	37354
[View Peptides]	HTB2	Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly id...	7	12	26.0%	0.0104	14237
[View Peptides]	HTB1	Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly id...	7	12	26.0%	0.0104	14252
[View Peptides]	RPL12B, RPL12A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b d...	7	7	18.8%	0.00481	17823
[View Peptides]	PAB1	Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th...	7	7	12.3%	0.00137	64344
[View Peptides]	TUB2	Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymeriz...	7	7	11.4%	0.00173	50923
[View Peptides]	RPL4A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	7	7	7.7%	0.00219	39092
[View Peptides]	RPL4B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarit...	7	7	7.7%	0.00219	39062
[View Peptides]	SPC98	Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the...	7	15	5.0%	0.00201	98227
[View Peptides]	RPL10	Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subu...	6	9	23.1%	0.00461	25361
[View Peptides]	RPS0A	Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp; required for mat...	6	6	22.6%	0.0027	28024
[View Peptides]	RPS0B	Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Ap; required for mat...	6	6	22.6%	0.0027	27962
[View Peptides]	PSA1	GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from ...	6	7	17.5%	0.0022	39566
[View Peptides]	SAM2	S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom ...	6	7	16.9%	0.00206	42256
[View Peptides]	ASC1	G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p; ortholog of RACK1 th...	6	6	16.6%	0.00213	34805
[View Peptides]	SAM1	S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom ...	6	7	13.6%	0.00208	41818
[View Peptides]	FPR3	Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase); FK506 binding protein; phosphorylated by cas...	6	7	12.9%	0.00193	46553
[View Peptides]	DBP3	Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis	6	9	11.9%	0.00195	58827
[View Peptides]	YRO2	Putative protein of unknown function; the authentic, non-tagged protein is detected in a phosphoryla...	6	8	10.5%	0.00263	38720
[View Peptides]	SPC97	Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the...	6	6	5.8%	8.26E-4	96825
[View Peptides]	ACC1	Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to f...	6	6	3.1%	3.04E-4	250351
[View Peptides]	FAS1	Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a...	6	6	2.9%	3.31E-4	228689
[View Peptides]	TSA1	Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant; self-as...	5	5	24.0%	0.00289	21590
[View Peptides]	YRA1	RNA binding protein required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA e...	5	8	16.8%	0.00401	24956
[View Peptides]	KAR1	Essential protein involved in karyogamy during mating and in spindle pole body duplication during mi...	5	6	14.3%	0.00157	50653
[View Peptides]	VMA2	Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a...	5	5	13.0%	0.0011	57749
[View Peptides]	RPS2	Protein component of the small (40S) subunit, essential for control of translational accuracy; phosp...	5	5	12.6%	0.00223	27450
[View Peptides]	ALD6	Cytosolic aldehyde dehydrogenase, activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; re...	5	5	12.2%	0.00113	54414
[View Peptides]	PGK1	3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phospha...	5	5	11.3%	0.00136	44738
[View Peptides]	GAL2	Galactose permease, required for utilization of galactose; also able to transport glucose	5	5	6.6%	9.87E-4	63626
[View Peptides]	HXT1	Low-affinity glucose transporter of the major facilitator superfamily, expression is induced by Hxk2...	5	5	5.6%	9.94E-4	63261
[View Peptides]	HXT3	Low affinity glucose transporter of the major facilitator superfamily, expression is induced in low ...	5	5	5.6%	9.99E-4	62558
[View Peptides]	YLR227W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	5	6	4.1%	3.87E-4	198404
[View Peptides]	TKL1	Transketolase, similar to Tkl2p; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate...	5	5	4.0%	8.33E-4	73806
[View Peptides]	RRP5	RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both ...	5	6	3.1%	3.93E-4	193133
[View Peptides]	TRA1	Subunit of SAGA and NuA4 histone acetyltransferase complexes; interacts with acidic activators (e.g....	5	5	1.8%	1.51E-4	433182
[View Peptides]	RPP2A	Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction...	4	4	32.1%	0.00427	10746
[View Peptides]	RPP1B	Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of tra...	4	4	28.3%	0.00427	10668
[View Peptides]	RPL27B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Ap and has similari...	4	7	22.8%	0.00583	15505
[View Peptides]	RPL27A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Bp and has similari...	4	7	22.8%	0.00583	15531
[View Peptides]	RPS11A, RPS11B	Protein component of the small (40S) ribosomal subunit; identical to Rps11Bp and has similarity to E...	4	4	20.5%	0.0029	17749
[View Peptides]	RPS18B, RPS18A	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similari...	4	4	20.5%	0.0031	17038
[View Peptides]	RPL7A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarit...	4	8	17.6%	0.00371	27638
[View Peptides]	HTA1	Histone H2A, core histone protein required for chromatin assembly and chromosome function; one of tw...	4	4	15.2%	0.00343	13989
[View Peptides]	HTA2	Histone H2A, core histone protein required for chromatin assembly and chromosome function; one of tw...	4	4	15.2%	0.00343	13989
[View Peptides]	RPL2A, RPL2B	Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E....	4	4	15.0%	0.00178	27408
[View Peptides]	RPS10B	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps10Ap and has similari...	4	5	14.3%	0.00539	12738
[View Peptides]	RPS10A	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps10Bp and has similari...	4	5	14.3%	0.00539	12739
[View Peptides]	ADH1	Alcohol dehydrogenase, fermentative isozyme active as homo- or heterotetramers; required for the red...	4	4	12.6%	0.0013	36849
[View Peptides]	NSR1	Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ri...	4	4	12.1%	0.00109	44535
[View Peptides]	PRS5	5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot...	4	6	11.9%	0.00137	53505
[View Peptides]	CYS3	Cystathionine gamma-lyase, catalyzes one of the two reactions involved in the transsulfuration pathw...	4	5	10.4%	0.00144	42542
[View Peptides]	RPL3	Protein component of the large (60S) ribosomal subunit, has similarity to E. coli L3 and rat L3 ribo...	4	4	9.0%	0.00117	43758
[View Peptides]	RPL13B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential f...	4	7	9.0%	0.00398	22525
[View Peptides]	ILV5	Acetohydroxyacid reductoisomerase, mitochondrial protein involved in branched-chain amino acid biosy...	4	4	8.6%	0.00115	44368
[View Peptides]	SUP35	Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a domi...	4	4	7.9%	6.61E-4	76551
[View Peptides]	ACT1	Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio...	4	6	7.7%	0.00181	41690
[View Peptides]	HOM3	Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in ...	4	6	6.5%	0.00129	58110
[View Peptides]	CDC5	Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p; found at bud neck, nucleus and ...	4	5	6.2%	8.03E-4	81031
[View Peptides]	MET6	Cobalamin-independent methionine synthase, involved in methionine biosynthesis and regeneration; req...	4	5	5.9%	7.38E-4	85860
[View Peptides]	HSC82	Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, a...	4	4	5.7%	6.43E-4	80900
[View Peptides]	FAS2	Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ...	4	4	2.7%	2.4E-4	206945
[View Peptides]	YFL002W-A, YGR161W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	4	4	2.5%	2.56E-4	202038
[View Peptides]	YCL019W	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	4	4	2.5%	2.56E-4	202095
[View Peptides]	FKS1	Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic sub...	4	4	2.1%	2.42E-4	214849
[View Peptides]	MMS1	Subunit of an E3 ubiquitin ligase complex involved in resolving replication intermediates or prevent...	4	5	2.1%	4.03E-4	161237
[View Peptides]	IST2	Plasma membrane protein that may be involved in osmotolerance, localizes to the mother cell in small...	4	4	1.9%	4.79E-4	105854
[View Peptides]	RPS25B	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps25Ap and has similari...	3	5	29.6%	0.00524	12009
[View Peptides]	RPS25A	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps25Bp and has similari...	3	5	29.6%	0.00524	12039
[View Peptides]	RPL26A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Bp and has similari...	3	3	22.0%	0.00268	14234
[View Peptides]	RPL26B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similari...	3	3	21.7%	0.00263	14609
[View Peptides]	RPS9B	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps9Ap and has similarit...	3	3	17.9%	0.00174	22299
[View Peptides]	RPS9A	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps9Bp and has similarit...	3	3	17.8%	0.00172	22443
[View Peptides]	RPS13	Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S15 and rat S13 ri...	3	4	17.2%	0.003	17029
[View Peptides]	RPL19B, RPL19A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Ap and has similari...	3	3	16.9%	0.0018	21704
[View Peptides]	RPS3	Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease ...	3	3	15.0%	0.00142	26503
[View Peptides]	RPL9A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Bp and has similarit...	3	3	13.1%	0.00178	21569
[View Peptides]	RPL9B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap and has similarit...	3	3	13.1%	0.00178	21657
[View Peptides]	RPL20B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similari...	3	4	12.6%	0.0026	20713
[View Peptides]	RPL20A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similari...	3	4	12.4%	0.00255	21236
[View Peptides]	RPL8B	Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has simila...	3	3	11.7%	0.00133	28112
[View Peptides]	RPS1B	Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Ap and has similarit...	3	5	11.0%	0.00222	28812
[View Peptides]	GSP1	Ran GTPase, GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear orga...	3	5	11.0%	0.00259	24810
[View Peptides]	GSP2	GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RN...	3	5	10.9%	0.00257	24991
[View Peptides]	CBR1	Microsomal cytochrome b reductase, not essential for viability; also detected in mitochondria; mutat...	3	4	10.9%	0.00141	36199
[View Peptides]	YDJ1	Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein trans...	3	3	9.8%	8.31E-4	44671
[View Peptides]	RPL18A, RPL18B	Protein component of the large (60S) ribosomal subunit, identical to Rpl18Bp and has similarity to r...	3	4	9.1%	0.00244	20563
[View Peptides]	HOM2	Aspartic beta semi-aldehyde dehydrogenase, catalyzes the second step in the common pathway for methi...	3	3	8.5%	9.31E-4	39544
[View Peptides]	PGI1	Glycolytic enzyme phosphoglucose isomerase, catalyzes the interconversion of glucose-6-phosphate and...	3	4	8.1%	8.18E-4	61299
[View Peptides]	RPS24A, RPS24B	Protein component of the small (40S) ribosomal subunit; identical to Rps24Bp and has similarity to r...	3	4	8.1%	0.00336	15329
[View Peptides]	SRO9	Cytoplasmic RNA-binding protein that associates with translating ribosomes; involved in heme regulat...	3	3	7.8%	7.83E-4	48060
[View Peptides]	FBA1	Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversio...	3	4	6.1%	0.00126	39621
[View Peptides]	YHR020W	Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ...	3	3	5.2%	4.94E-4	77386
[View Peptides]	PRP43	RNA helicase in the DEAH-box family, functions in both RNA polymerase I and polymerase II transcript...	3	3	4.7%	4.43E-4	87562
[View Peptides]	ROK1	ATP-dependent RNA helicase of the DEAD box family; required for 18S rRNA synthesis	3	3	4.6%	6.03E-4	63653
[View Peptides]	DBP2	Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated m...	3	3	4.6%	6.22E-4	60999
[View Peptides]	HSP60	Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides...	3	3	4.4%	5.94E-4	60752
[View Peptides]	PYC1	Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly simi...	3	3	4.2%	2.88E-4	130099
[View Peptides]	SAC1	Phosphatidylinositol phosphate (PtdInsP) phosphatase involved in hydrolysis of PtdIns[4]P; transmemb...	3	3	4.0%	5.45E-4	71125
[View Peptides]	DED1	ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye...	3	3	3.8%	5.63E-4	65553
[View Peptides]	PFK1	Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaer...	3	3	3.7%	3.44E-4	107970
[View Peptides]	ALA1	Cytoplasmic and mitochondrial alanyl-tRNA synthetase, required for protein synthesis; point mutation...	3	3	3.7%	3.55E-4	107277
[View Peptides]	SSE1	ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded protein...	3	3	3.6%	4.9E-4	77367
[View Peptides]	SEC61	Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p); forms a channel for SRP-dependent pro...	3	3	3.5%	7.08E-4	52937
[View Peptides]	MIR1	Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria; functionally redunda...	3	3	3.5%	0.00109	32812
[View Peptides]	YOR142W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	3	3.4%	1.94E-4	198535
[View Peptides]	CRT10	Protein involved in transcriptional regulation of RNR2 and RNR3; expression of the gene is induced b...	3	3	3.1%	3.55E-4	109715
[View Peptides]	MET5	Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth...	3	3	2.7%	2.36E-4	161218
[View Peptides]	POM152	Nuclear pore membrane glycoprotein; may be involved in duplication of nuclear pores and nuclear pore...	3	3	2.5%	2.54E-4	151652
[View Peptides]	STU2	Microtubule-associated protein (MAP) of the XMAP215/Dis1 family; regulates microtubule dynamics duri...	3	3	2.5%	3.83E-4	100918
[View Peptides]	NUP170	Subunit of the nuclear pore complex (NPC), required for NPC localization of specific nucleoporins; i...	3	3	2.2%	2.26E-4	169474
[View Peptides]	GLT1	NAD(+)-dependent glutamate synthase (GOGAT), synthesizes glutamate from glutamine and alpha-ketoglut...	3	3	2.1%	1.58E-4	238100
[View Peptides]	URB1	Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs, associated with the 27...	3	3	2.0%	1.93E-4	203286
[View Peptides]	YBL100W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	3	1.8%	1.92E-4	202214
[View Peptides]	Reverse_YPL058C	PDR12 SGDID:S000005979, Chr XVI from 450374-445839, reverse complement, Verified ORF, "Plasma membra...	3	3	1.8%	2.25E-4	171064
[View Peptides]	TFP1	Subunit A of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase; protein prec...	3	3	1.7%	3.17E-4	118637
[View Peptides]	GSC2	Catalytic subunit of 1,3-beta-glucan synthase, involved in formation of the inner layer of the spore...	3	3	1.6%	1.79E-4	216988
[View Peptides]	NOP10	Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs, which are ...	2	2	36.2%	0.00391	6636
[View Peptides]	RPP1A	Ribosomal stalk protein P1 alpha, involved in the interaction between translational elongation facto...	2	2	22.6%	0.00214	10908
[View Peptides]	EGD1	Subunit beta1 of the nascent polypeptide-associated complex (NAC) involved in protein targeting, ass...	2	2	18.5%	0.00144	17020
[View Peptides]	RPS16B, RPS16A	Protein component of the small (40S) ribosomal subunit; identical to Rps16Ap and has similarity to E...	2	2	16.1%	0.00158	15847
[View Peptides]	RPS17B	Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Ap and has similari...	2	2	15.4%	0.00167	15803
[View Peptides]	RPS17A	Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Bp and has similari...	2	2	15.4%	0.00167	15788
[View Peptides]	RPS12	Protein component of the small (40S) ribosomal subunit; has similarity to rat ribosomal protein S12	2	2	15.4%	0.00158	15472
[View Peptides]	RPS22B	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps22Ap and has similari...	2	2	14.6%	0.00174	14626
[View Peptides]	RPS22A	Protein component of the small (40S) ribosomal subunit; nearly identical to Rps22Bp and has similari...	2	2	14.6%	0.00174	14626
[View Peptides]	RHO1	GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol...	2	2	14.4%	0.00108	23152
[View Peptides]	HSP26	Small heat shock protein (sHSP) with chaperone activity; forms hollow, sphere-shaped oligomers that ...	2	2	14.0%	0.00106	23880
[View Peptides]	APT1	Adenine phosphoribosyltransferase, catalyzes the formation of AMP from adenine and 5-phosphoribosylp...	2	3	13.4%	0.00182	20587
[View Peptides]	RPL21A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similari...	2	2	12.5%	0.00142	18242
[View Peptides]	RPL21B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Ap and has similari...	2	2	12.5%	0.00142	18274
[View Peptides]	RPS7A	Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Bp; interacts with K...	2	3	12.1%	0.00179	21622
[View Peptides]	RPL23B, RPL23A	Protein component of the large (60S) ribosomal subunit, identical to Rpl23Ap and has similarity to E...	2	2	11.7%	0.00165	14473
[View Peptides]	RPB5	RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra...	2	2	11.2%	0.00105	25079
[View Peptides]	RPS14B	Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processin...	2	2	10.9%	0.00164	14650
[View Peptides]	RPS14A	Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processin...	2	2	10.9%	0.00165	14537
[View Peptides]	RPL24B	Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Ap and has simi...	2	2	10.3%	0.00146	17547
[View Peptides]	RPL24A	Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Bp and has simi...	2	2	10.3%	0.00146	17614
[View Peptides]	RPS5	Protein component of the small (40S) ribosomal subunit, the least basic of the non-acidic ribosomal ...	2	2	10.2%	0.00101	25039
[View Peptides]	WWM1	WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that re...	2	2	10.0%	0.00107	22655
[View Peptides]	BUD21	Component of small ribosomal subunit (SSU) processosome that contains U3 snoRNA; originally isolated...	2	3	9.8%	0.00159	24385
[View Peptides]	RPA34	RNA polymerase I subunit A34.5	2	2	9.4%	9.72E-4	26875
[View Peptides]	Reverse_YLR243W	YLR243W SGDID:S000004233, Chr XII from 624205-625023, Uncharacterized ORF, "Protein required for cel...	2	2	9.2%	8.3E-4	30653
[View Peptides]	CCW14	Covalently linked cell wall glycoprotein, present in the inner layer of the cell wall	2	2	9.2%	9.52E-4	23268
[View Peptides]	RPS6A, RPS6B	Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to ra...	2	2	8.9%	9.6E-4	26996
[View Peptides]	ARF2	ADP-ribosylation factor, GTPase of the Ras superfamily involved in regulation of coated formation ve...	2	3	8.3%	0.00188	20658
[View Peptides]	ARF1	ADP-ribosylation factor, GTPase of the Ras superfamily involved in regulation of coated vesicle form...	2	3	8.3%	0.00188	20529
[View Peptides]	RBG1	Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts w...	2	2	8.1%	6.14E-4	40701
[View Peptides]	POR1	Mitochondrial porin (voltage-dependent anion channel), outer membrane protein required for the maint...	2	2	8.1%	8.0E-4	30428
[View Peptides]	RPS4B, RPS4A	Protein component of the small (40S) ribosomal subunit; identical to Rps4Ap and has similarity to ra...	2	2	7.7%	8.68E-4	29410
[View Peptides]	SBP1	Putative RNA binding protein; involved in translational repression and found in cytoplasmic P bodies...	2	2	7.5%	7.71E-4	32990
[View Peptides]	RPL25	Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarit...	2	2	7.0%	0.0016	15758
[View Peptides]	TIF1, TIF2	Translation initiation factor eIF4A, identical to Tif2p; DEA(D/H)-box RNA helicase that couples ATPa...	2	3	6.3%	8.6E-4	44697
[View Peptides]	NOP2	Probable RNA m(5)C methyltransferase, essential for processing and maturation of 27S pre-rRNA and la...	2	4	6.1%	7.33E-4	69812
[View Peptides]	Reverse_YDR145W	TAF12 SGDID:S000002552, Chr IV from 746733-748352, Verified ORF, "Subunit (61/68 kDa) of TFIID and S...	2	2	6.1%	4.2E-4	61073
[View Peptides]	FCY22	Putative purine-cytosine permease, very similar to Fcy2p but cannot substitute for its function	2	3	6.0%	6.41E-4	57327
[View Peptides]	FCY2	Purine-cytosine permease, mediates purine (adenine, guanine, and hypoxanthine) and cytosine accumula...	2	3	6.0%	6.38E-4	58201
[View Peptides]	RPL28	Ribosomal protein of the large (60S) ribosomal subunit, has similarity to E. coli L15 and rat L27a r...	2	2	6.0%	0.00152	16722
[View Peptides]	CKA2	Alpha' catalytic subunit of casein kinase 2, a Ser/Thr protein kinase with roles in cell growth and ...	2	2	5.9%	6.68E-4	39404
[View Peptides]	KES1	Member of the oxysterol binding protein family, which includes seven yeast homologs; involved in neg...	2	2	5.8%	5.22E-4	49492
[View Peptides]	CUP5	Proteolipid subunit of the vacuolar H(+)-ATPase V0 sector (subunit c; dicyclohexylcarbodiimide bindi...	2	2	5.6%	0.00142	16351
[View Peptides]	HRR25	Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an...	2	3	5.5%	6.88E-4	57340
[View Peptides]	RPT1	One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation ...	2	2	5.4%	4.85E-4	51983
[View Peptides]	NAP1	Protein that interacts with mitotic cyclin Clb2p; required for the regulation of microtubule dynamic...	2	3	5.3%	8.15E-4	47885
[View Peptides]	IPP1	Cytoplasmic inorganic pyrophosphatase (PPase), homodimer that catalyzes the rapid exchange of oxygen...	2	5	4.9%	0.00197	32300
[View Peptides]	CYS4	Cystathionine beta-synthase, catalyzes synthesis of cystathionine from serine and homocysteine, the ...	2	2	4.7%	4.47E-4	56022
[View Peptides]	HER2	Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; ...	2	2	4.7%	4.88E-4	50919
[View Peptides]	Reverse_YBR078W	ECM33 SGDID:S000000282, Chr II from 393118-393175,393506-394854, Verified ORF, "GPI-anchored protein...	2	2	4.7%	4.83E-4	48237
[View Peptides]	GUS1	Glutamyl-tRNA synthetase (GluRS), forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; ...	2	3	4.5%	4.8E-4	80843
[View Peptides]	ERG11	Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol to form 4,4''-dimeth...	2	2	4.5%	4.27E-4	60720
[View Peptides]	IMD2	Inosine monophosphate dehydrogenase, catalyzes the rate-limiting step in GTP biosynthesis, expressio...	2	2	4.4%	4.33E-4	56530
[View Peptides]	DDI1	DNA damage-inducible v-SNARE binding protein, contains a ubiquitin-associated (UBA) domain, may act ...	2	2	4.4%	5.29E-4	47354
[View Peptides]	ARO8	Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis	2	3	4.2%	6.8E-4	56178
[View Peptides]	DBF4	Regulatory subunit of Cdc7p-Dbf4p kinase complex, required for Cdc7p kinase activity and initiation ...	2	2	4.1%	3.22E-4	80690
[View Peptides]	DBP9	ATP-dependent RNA helicase of the DEAD-box family involved in biogenesis of the 60S ribosomal subuni...	2	2	4.0%	3.81E-4	68060
[View Peptides]	Reverse_YPL179W	PPQ1 SGDID:S000006100, Chr XVI from 208156-209805, Verified ORF, "Putative protein serine/threonine ...	2	2	4.0%	4.12E-4	61421
[View Peptides]	TYR1	Prephenate dehydrogenase involved in tyrosine biosynthesis, expression is dependent on phenylalanine...	2	2	4.0%	5.01E-4	50923
[View Peptides]	YDR186C	Putative protein of unknown function; may interact with ribosomes, based on co-purification experime...	2	2	3.9%	2.58E-4	98331
[View Peptides]	UTP13	Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ...	2	3	3.8%	4.16E-4	91032
[View Peptides]	URA7	Major CTP synthase isozyme (see also URA8), catalyzes the ATP-dependent transfer of the amide nitrog...	2	3	3.8%	5.87E-4	64710
[View Peptides]	SHM2	Cytosolic serine hydroxymethyltransferase, converts serine to glycine plus 5,10 methylenetetrahydrof...	2	2	3.8%	4.83E-4	52219
[View Peptides]	YIL108W	Putative metalloprotease	2	2	3.7%	3.25E-4	77414
[View Peptides]	UME1	Negative regulator of meiosis, required for repression of a subset of meiotic genes during vegetativ...	2	2	3.7%	4.92E-4	51022
[View Peptides]	TEF4	Translation elongation factor EF-1 gamma	2	3	3.6%	8.25E-4	46520
[View Peptides]	Reverse_YML031W	NDC1 SGDID:S000004493, Chr XIII from 214189-216156, Verified ORF, "Nuclear envelope protein with mul...	2	2	3.5%	3.45E-4	74134
[View Peptides]	PRT1	eIF3b subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati...	2	2	3.4%	2.97E-4	88130
[View Peptides]	DPS1	Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspa...	2	3	3.4%	6.1E-4	63516
[View Peptides]	GFA1	Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glut...	2	2	3.3%	3.16E-4	80047
[View Peptides]	Reverse_YPL112C	PEX25 SGDID:S000006033, Chr XVI from 338619-337435, reverse complement, Verified ORF, "Peripheral pe...	2	2	3.3%	5.74E-4	44911
[View Peptides]	Reverse_YGR014W	MSB2 SGDID:S000003246, Chr VII from 516947-520867, Verified ORF, "Mucin family member at the head of...	2	2	3.2%	1.73E-4	133114
[View Peptides]	CTR1	High-affinity copper transporter of the plasma membrane, mediates nearly all copper uptake under low...	2	2	3.2%	5.58E-4	44442
[View Peptides]	CDC48	ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p a...	2	2	3.0%	2.71E-4	91996
[View Peptides]	PAT1	Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithfu...	2	2	3.0%	2.85E-4	88495
[View Peptides]	MID2	O-glycosylated plasma membrane protein that acts as a sensor for cell wall integrity signaling and a...	2	2	2.9%	6.03E-4	39146
[View Peptides]	FUN12	GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes a...	2	2	2.8%	2.26E-4	112268
[View Peptides]	UTP21	Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in pr...	2	2	2.8%	2.41E-4	104791
[View Peptides]	FRA1	Protein involved in negative regulation of transcription of iron regulon; forms an iron independent ...	2	2	2.8%	3.02E-4	84924
[View Peptides]	MES1	Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p, which in...	2	2	2.7%	3.02E-4	85678
[View Peptides]	UTP8	Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subu...	2	2	2.7%	3.18E-4	80191
[View Peptides]	UBP3	Ubiquitin-specific protease that interacts with Bre5p to co-regulate anterograde and retrograde tran...	2	2	2.5%	2.48E-4	101917
[View Peptides]	ASN2	Asparagine synthetase, isozyme of Asn1p; catalyzes the synthesis of L-asparagine from L-aspartate in...	2	2	2.4%	3.96E-4	64593
[View Peptides]	PUF3	Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anter...	2	2	2.3%	2.58E-4	98068
[View Peptides]	EAF1	Component of the NuA4 histone acetyltransferase complex; acts as a platform for assembly of NuA4 sub...	2	2	2.2%	2.31E-4	112502
[View Peptides]	Reverse_YNR047W	YNR047W SGDID:S000005330, Chr XIV from 708525-711206, Uncharacterized ORF, "Putative protein kinase ...	2	2	2.2%	2.53E-4	100546
[View Peptides]	Reverse_YPR030W	CSR2 SGDID:S000006234, Chr XVI from 627877-631242, Verified ORF, "Nuclear protein with a potential r...	2	2	2.1%	2.02E-4	124848
[View Peptides]	CAF120	Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in control...	2	2	2.1%	2.14E-4	118280
[View Peptides]	Reverse_YMR019W	STB4 SGDID:S000004621, Chr XIII from 312155-315004, Verified ORF, "Protein that binds Sin3p in a two...	2	2	1.9%	2.38E-4	109825
[View Peptides]	KEM1	Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies involved i...	2	2	1.8%	1.48E-4	175459
[View Peptides]	RIA1	Cytoplasmic GTPase involved in biogenesis of the 60S ribosome; has similarity to translation elongat...	2	2	1.8%	2.04E-4	124464
[View Peptides]	MSS116	DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns; non-polar ...	2	2	1.8%	3.41E-4	76269
[View Peptides]	YLR413W	Putative protein of unknown function; YLR413W is not an essential gene	2	2	1.8%	3.36E-4	72698
[View Peptides]	RPA190	RNA polymerase I largest subunit A190	2	2	1.4%	1.36E-4	186431
[View Peptides]	Reverse_YOL081W	IRA2 SGDID:S000005441, Chr XV from 171069-180308, Verified ORF, "GTPase-activating protein that nega...	2	2	1.2%	7.36E-5	351669
[View Peptides]	NUP192	Essential structural subunit of the nuclear pore complex (NPC), localizes to the nuclear periphery o...	2	2	1.2%	1.35E-4	191534
[View Peptides]	YDR524W-C	Putative protein of unknown function; small ORF identified by SAGE; deletion strains are moderately ...	1	1	27.6%	0.00391	3534
[View Peptides]	EFG1	Essential protein required for maturation of 18S rRNA; null mutant is sensitive to hydroxyurea and i...	1	1	23.8%	0.0018	7099
[View Peptides]	UBC7	Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway; requires Cu...	1	1	15.2%	6.86E-4	18520
[View Peptides]	YDR246W-A	Putative protein of unknown function; identified by fungal homology and RT-PCR	1	1	15.2%	0.00172	7667
[View Peptides]	FPR1	Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin; also binds to ...	1	1	14.9%	9.94E-4	12158
[View Peptides]	YLR146W-A	Putative protein of unknown function	1	1	14.5%	0.00183	7078
[View Peptides]	Reverse_YBR282W	MRPL27 SGDID:S000000486, Chr II from 768236-768676, Verified ORF, "Mitochondrial ribosomal protein o...	1	1	14.4%	7.71E-4	16492
[View Peptides]	RPB11	RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit	1	1	14.2%	9.44E-4	13616
[View Peptides]	Reverse_YPR182W	SMX3 SGDID:S000006386, Chr XVI from 900190-900450, Verified ORF, "Core Sm protein Sm F; part of hete...	1	1	14.0%	0.0013	9660
[View Peptides]	YPL119C-A	Putative protein of unknown function; identified by expression profiling and mass spectrometry	1	1	12.6%	0.0013	10112
[View Peptides]	Reverse_YLR099W-A	YLR099W-A SGDID:S000007618, Chr XII from 341326-341589, Uncharacterized ORF, "Hypothetical protein i...	1	1	12.6%	0.00129	9985
[View Peptides]	RPL40B, RPL40A	Fusion protein, identical to Rpl40Ap, that is cleaved to yield ubiquitin and a ribosomal protein of ...	1	1	12.5%	8.85E-4	14554
[View Peptides]	RPL34B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Ap and has similari...	1	1	10.7%	9.36E-4	13641
[View Peptides]	RPL34A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp and has similari...	1	1	10.7%	9.36E-4	13639
[View Peptides]	RPS31	Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin...	1	1	10.5%	7.45E-4	17216
[View Peptides]	Reverse_YDR115W	YDR115W SGDID:S000002522, Chr IV from 682170-682487, Verified ORF, "Putative mitochondrial ribosomal...	1	1	10.5%	0.00107	12030
[View Peptides]	SOD1	Cytosolic copper-zinc superoxide dismutase; some mutations are analogous to those that cause ALS (am...	1	1	10.4%	7.36E-4	15855
[View Peptides]	Reverse_YDR367W	YDR367W SGDID:S000002775, Chr IV from 1212838-1212867,1212969-1213604, Uncharacterized ORF, "Protein...	1	1	10.0%	5.1E-4	25484
[View Peptides]	YGL194C-A	Putative protein of unknown function, identified based on comparisons of the genome sequences of six...	1	1	10.0%	0.00142	9624
[View Peptides]	RPS15	Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S19 and rat S15 ri...	1	1	9.9%	7.98E-4	16002
[View Peptides]	Reverse_YPR062W	FCY1 SGDID:S000006266, Chr XVI from 677162-677638, Verified ORF, "Cytosine deaminase, zinc metalloen...	1	1	9.5%	7.12E-4	17507
[View Peptides]	Reverse_YNR040W	YNR040W SGDID:S000005323, Chr XIV from 699692-700462, Uncharacterized ORF, "Hypothetical protein"	1	1	9.4%	4.41E-4	28636
[View Peptides]	RPL35A, RPL35B	Protein component of the large (60S) ribosomal subunit, identical to Rpl35Bp and has similarity to r...	1	1	9.2%	9.44E-4	13910
[View Peptides]	YNL050C	Putative protein of unknown function; YNL050c is not an essential gene	1	1	8.9%	4.2E-4	31437
[View Peptides]	Reverse_YPR143W	RRP15 SGDID:S000006347, Chr XVI from 818319-819071, Verified ORF, "Nucleolar protein, constituent of...	1	1	8.8%	4.51E-4	28212
[View Peptides]	RPA14	RNA polymerase I subunit A14	1	1	8.8%	8.27E-4	14585
[View Peptides]	CBS1	Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translat...	1	1	8.7%	4.95E-4	26586
[View Peptides]	MRPL50	Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation	1	1	8.6%	8.15E-4	16283
[View Peptides]	Reverse_YER063W	THO1 SGDID:S000000865, Chr V from 281708-282364, Verified ORF, "Protein of unknown function; overpro...	1	1	8.3%	5.17E-4	24138
[View Peptides]	Reverse_Sbay_549...	RPB7 SGDID:S000002812, Chr IV from 1277159-1276644, reverse complement, Verified ORF, "RNA polymeras...	1	1	8.2%	6.59E-4	19058
[View Peptides]	Reverse_YHR126C	YHR126C SGDID:S000001168, Chr VIII from 360184-359705, reverse complement, Uncharacterized ORF, "Hyp...	1	1	8.2%	7.08E-4	16635
[View Peptides]	RPL6A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, has similarity to Rp...	1	1	8.0%	6.44E-4	19961
[View Peptides]	RPL31B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Ap and has similari...	1	2	8.0%	0.002	12967
[View Peptides]	RPL31A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Bp and has similari...	1	2	8.0%	0.002	12953
[View Peptides]	YNR061C	Putative protein of unknown function	1	1	7.8%	5.17E-4	24317
[View Peptides]	RPL32	Protein component of the large (60S) ribosomal subunit, has similarity to rat L32 ribosomal protein;...	1	1	7.7%	8.71E-4	14771
[View Peptides]	Reverse_YDL129W	YDL129W SGDID:S000002287, Chr IV from 231024-231899, Uncharacterized ORF, "Hypothetical protein"	1	1	7.6%	3.88E-4	32916
[View Peptides]	YAF9	Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex, may function to ...	1	1	7.5%	5.01E-4	25981
[View Peptides]	Reverse_YDL226C	GCS1 SGDID:S000002385, Chr IV from 52174-51116, reverse complement, Verified ORF, "ADP-ribosylation ...	1	1	7.4%	3.21E-4	39296
[View Peptides]	RPL22A	Protein component of the large (60S) ribosomal subunit, has similarity to Rpl22Bp and to rat L22 rib...	1	1	7.4%	9.36E-4	13693
[View Peptides]	RRT14	Putative protein of unknown function; identified in a screen for mutants with decreased levels of rD...	1	1	7.3%	5.5E-4	23845
[View Peptides]	Reverse_YNL281W	HCH1 SGDID:S000005225, Chr XIV from 108467-108928, Verified ORF, "Heat shock protein regulator that ...	1	1	7.2%	7.36E-4	17246
[View Peptides]	AAC1	Mitochondrial inner membrane ADP/ATP translocator, exchanges cytosolic ADP for mitochondrially synth...	1	1	7.1%	3.67E-4	34121
[View Peptides]	Reverse_YHL043W	ECM34 SGDID:S000001035, Chr VIII from 14899-15411, Verified ORF, "Non-essential protein of unknown f...	1	1	7.1%	6.62E-4	19812
[View Peptides]	Reverse_YDR308C	SRB7 SGDID:S000002716, Chr IV from 1078443-1078021, reverse complement, Verified ORF, "Subunit of th...	1	1	7.1%	8.03E-4	16071
[View Peptides]	SNU13	RNA binding protein, part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP invol...	1	1	7.1%	8.99E-4	13569
[View Peptides]	Reverse_YMR311C	GLC8 SGDID:S000004928, Chr XIII from 897602-896913, reverse complement, Verified ORF, "Regulatory su...	1	1	7.0%	4.92E-4	26649
[View Peptides]	CPR1	Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization...	1	1	6.8%	6.99E-4	17391
[View Peptides]	SHR3	Endoplasmic reticulum packaging chaperone, required for incorporation of amino acid permeases into C...	1	1	6.7%	5.39E-4	23512
[View Peptides]	YBR062C	Hypothetical protein	1	1	6.7%	6.29E-4	20596
[View Peptides]	ASG7	Protein that regulates signaling from a G protein beta subunit Ste4p and its relocalization within t...	1	1	6.6%	6.19E-4	21995
[View Peptides]	YMR244W	Putative protein of unknown function	1	1	6.5%	3.19E-4	37383
[View Peptides]	Reverse_YGR262C	BUD32 SGDID:S000003494, Chr VII from 1017765-1016980, reverse complement, Verified ORF, "Protein inv...	1	1	6.5%	4.32E-4	29936
[View Peptides]	NGL3	Putative endonuclease, has a domain similar to a magnesium-dependent endonuclease motif in mRNA dead...	1	1	6.3%	2.24E-4	57742
[View Peptides]	UTP23	Essential nucleolar protein that is a component of the SSU (small subunit) processome involved in 40...	1	1	6.3%	4.46E-4	28801
[View Peptides]	Reverse_YGL258W	YGL258W SGDID:S000003227, Chr VII from 11110-11730, Uncharacterized ORF, "Hypothetical protein"	1	1	6.3%	5.47E-4	22152
[View Peptides]	Reverse_YOR387C	YOR387C SGDID:S000005914, Chr XV from 1070237-1069617, reverse complement, Uncharacterized ORF, "Hyp...	1	1	6.3%	5.47E-4	22140
[View Peptides]	CGI121	Protein involved in telomere uncapping and elongation as component of the KEOPS protein complex with...	1	1	6.3%	5.99E-4	21771
[View Peptides]	FES1	Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchan...	1	1	6.2%	3.91E-4	32604
[View Peptides]	SKP1	Evolutionarily conserved kinetochore protein that is part of multiple protein complexes, including t...	1	1	6.2%	5.84E-4	22330
[View Peptides]	AHP1	Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage; function i...	1	1	6.2%	6.44E-4	19115
[View Peptides]	Reverse_YLR042C	YLR042C SGDID:S000004032, Chr XII from 230452-229967, reverse complement, Uncharacterized ORF, "Hypo...	1	1	6.2%	6.99E-4	16950
[View Peptides]	Reverse_YLR367W	RPS22B SGDID:S000004359, Chr XII from 856441-856573,857057-857316, Verified ORF, "Protein component ...	1	1	6.2%	8.65E-4	14626
[View Peptides]	Reverse_YJL190C,...	RPS22A SGDID:S000003726, Chr X from 75301-74909, reverse complement, Verified ORF, "Protein componen...	1	1	6.2%	8.65E-4	14626
[View Peptides]	PDX3	Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus; transcr...	1	1	6.1%	4.97E-4	26908
[View Peptides]	YPT32	Rab family GTPase, very similar to Ypt31p; involved in the exocytic pathway; mediates intra-Golgi tr...	1	1	5.9%	5.1E-4	24520
[View Peptides]	YNL010W	Putative protein of unknown function with similarity to phosphoserine phosphatases; green fluorescen...	1	1	5.8%	4.7E-4	27481
[View Peptides]	YPT31	Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediates intra-Golgi tr...	1	1	5.8%	5.08E-4	24469
[View Peptides]	Reverse_YDL111C	RRP42 SGDID:S000002269, Chr IV from 264110-263313, reverse complement, Verified ORF, "Protein involv...	1	1	5.7%	4.26E-4	29055
[View Peptides]	RIB7	Diaminohydroxyphoshoribosylaminopyrimidine deaminase; catalyzes the second step of the riboflavin bi...	1	1	5.7%	4.64E-4	27116
[View Peptides]	YCP4	Protein of unknown function, has sequence and structural similarity to flavodoxins; predicted to be ...	1	1	5.7%	4.59E-4	26350
[View Peptides]	CIS3	Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with inter...	1	1	5.7%	4.99E-4	23242
[View Peptides]	Reverse_YOR312C	RPL20B SGDID:S000005839, Chr XV from 901176-901170,900762-900245, reverse complement, Verified ORF, ...	1	1	5.7%	6.47E-4	20713
[View Peptides]	EMG1	Member of the alpha/beta knot fold methyltransferase superfamily; required for maturation of 18S rRN...	1	1	5.6%	4.49E-4	27895
[View Peptides]	Reverse_YMR242C	RPL20A SGDID:S000004855, Chr XIII from 754196-754178,753741-753224, reverse complement, Verified ORF...	1	1	5.6%	6.33E-4	21236
[View Peptides]	HSP33	Possible chaperone and cysteine protease with similarity to E. coli Hsp31 and S. cerevisiae Hsp31p, ...	1	1	5.5%	4.78E-4	25926
[View Peptides]	HSP32	Possible chaperone and cysteine protease with similarity to E. coli Hsp31 and S. cerevisiae Hsp31p, ...	1	1	5.5%	4.78E-4	25940
[View Peptides]	SNO4	Possible chaperone and cysteine protease, similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and H...	1	1	5.5%	4.78E-4	26040
[View Peptides]	Reverse_YOR274W	MOD5 SGDID:S000005800, Chr XV from 837671-838957, Verified ORF, "Delta 2-isopentenyl pyrophosphate:t...	1	1	5.4%	2.64E-4	50237
[View Peptides]	Reverse_YPR174C	YPR174C SGDID:S000006378, Chr XVI from 888704-888039, reverse complement, Uncharacterized ORF, "Prot...	1	1	5.4%	5.1E-4	25411
[View Peptides]	RPL17B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similari...	1	1	5.4%	6.16E-4	20551
[View Peptides]	RPL17A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similari...	1	1	5.4%	6.16E-4	20549
[View Peptides]	CDS1	Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); an enzyme that catalyzes that conve...	1	1	5.3%	2.48E-4	51823
[View Peptides]	SEC14	Phosphatidylinositol/phosphatidylcholine transfer protein; involved in regulating PtdIns, PtdCho, an...	1	1	5.3%	3.73E-4	34901
[View Peptides]	Reverse_YMR084W	YMR084W SGDID:S000004689, Chr XIII from 436627-437415, Uncharacterized ORF, "Hypothetical protein"	1	1	5.3%	4.31E-4	29272
[View Peptides]	Reverse_YPR103W	PRE2 SGDID:S000006307, Chr XVI from 732347-733210, Verified ORF, "20S proteasome beta-type subunit, ...	1	1	5.2%	3.93E-4	31637
[View Peptides]	COX2	Subunit II of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane...	1	1	5.2%	4.51E-4	28567
[View Peptides]	Reverse_YER062C	HOR2 SGDID:S000000864, Chr V from 280680-279928, reverse complement, Verified ORF, "One of two redun...	1	1	5.2%	4.51E-4	27814
[View Peptides]	Reverse_YBR223C	TDP1 SGDID:S000000427, Chr II from 670292-668658, reverse complement, Verified ORF, "Tyrosyl-DNA Pho...	1	1	5.1%	2.08E-4	62333
[View Peptides]	YMR099C	Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase), likely involved in carbohydrate met...	1	1	5.1%	3.81E-4	33956
[View Peptides]	YIP4	Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of...	1	1	5.1%	4.82E-4	25995
[View Peptides]	Reverse_YDR177W	UBC1 SGDID:S000002584, Chr IV from 816873-817520, Verified ORF, "Ubiquitin-conjugating enzyme that m...	1	1	5.1%	5.24E-4	24178
[View Peptides]	Reverse_YEL024W	RIP1 SGDID:S000000750, Chr V from 107260-107907, Verified ORF, "Ubiquinol-cytochrome-c reductase, a ...	1	1	5.1%	5.24E-4	23365
[View Peptides]	Reverse_YDR066C	YDR066C SGDID:S000002473, Chr IV from 582495-581905, reverse complement, Uncharacterized ORF, "Hypot...	1	1	5.1%	5.75E-4	22541
[View Peptides]	RPL16B	N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA;...	1	1	5.1%	5.72E-4	22249
[View Peptides]	OSH7	Member of an oxysterol-binding protein family with seven members in S. cerevisiae; family members ha...	1	1	5.0%	2.59E-4	49805
[View Peptides]	RPN8	Essential, non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 prot...	1	1	5.0%	3.35E-4	38313
[View Peptides]	Reverse_YMR193W	MRPL24 SGDID:S000004806, Chr XIII from 650035-650811, Verified ORF, "Mitochondrial ribosomal protein...	1	1	5.0%	4.37E-4	30049
[View Peptides]	Reverse_YFL060C	SNO3 SGDID:S000001834, Chr VI from 10969-10301, reverse complement, Verified ORF, "Protein of unknow...	1	1	5.0%	5.08E-4	25132
[View Peptides]	RPL16A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA;...	1	1	5.0%	5.69E-4	22201
[View Peptides]	ANS1	Putative protein of unknown function; transcription dependent upon Azf1p	1	1	5.0%	7.12E-4	16635
[View Peptides]	Reverse_YJR067C	YAE1 SGDID:S000003828, Chr X from 567358-566933, reverse complement, Verified ORF, "Essential protei...	1	1	5.0%	7.98E-4	16076
[View Peptides]	Reverse_YMR113W	FOL3 SGDID:S000004719, Chr XIII from 494998-496281, Verified ORF, "Dihydrofolate synthetase, involve...	1	1	4.9%	2.65E-4	47851
[View Peptides]	MRPS5	Mitochondrial ribosomal protein of the small subunit	1	1	4.9%	3.69E-4	34883
[View Peptides]	PRE10	Alpha 7 subunit of the 20S proteasome	1	1	4.9%	3.93E-4	31536
[View Peptides]	Reverse_YFR007W	YFR007W SGDID:S000001903, Chr VI from 159293-160354, Uncharacterized ORF, "Hypothetical protein"	1	1	4.8%	3.2E-4	39885
[View Peptides]	MAF1	Negative regulator of RNA polymerase III; component of several signaling pathways that repress polym...	1	2	4.6%	5.74E-4	44733
[View Peptides]	SUR7	Plasma membrane protein that localizes to furrow-like invaginations (MCC patches); component of eiso...	1	1	4.6%	3.75E-4	33830
[View Peptides]	YJL160C	Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of c...	1	1	4.5%	3.95E-4	30215
[View Peptides]	MOB1	Component of the mitotic exit network; associates with and is required for the activation and Cdc15p...	1	2	4.5%	7.21E-4	35882
[View Peptides]	YNL200C	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...	1	1	4.5%	4.6E-4	27521
[View Peptides]	Reverse_YLR180W	SAM1 SGDID:S000004170, Chr XII from 515264-516412, Verified ORF, "S-adenosylmethionine synthetase, c...	1	1	4.5%	2.96E-4	41818
[View Peptides]	Reverse_YDR502C	SAM2 SGDID:S000002910, Chr IV from 1454454-1453300, reverse complement, Verified ORF, "S-adenosylmet...	1	1	4.4%	2.94E-4	42256
[View Peptides]	Reverse_YDL099W	BUG1 SGDID:S000002257, Chr IV from 283419-284444, Uncharacterized ORF, "Protein of unknown function;...	1	1	4.4%	3.31E-4	38295
[View Peptides]	CDC28	Catalytic subunit of the main cell cycle cyclin-dependent kinase (CDK); alternately associates with ...	1	1	4.4%	3.8E-4	34061
[View Peptides]	AYR1	NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase found in lipid particles, ER, and mitoch...	1	1	4.4%	3.81E-4	32814
[View Peptides]	STM1	Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with r...	1	1	4.4%	4.15E-4	29995
[View Peptides]	ULA1	Protein that acts together with Uba3p to activate Rub1p before its conjugation to proteins (neddylat...	1	1	4.3%	2.45E-4	52853
[View Peptides]	SER33	3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis; isozy...	1	1	4.3%	2.42E-4	51188
[View Peptides]	SER3	3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis; isozy...	1	1	4.3%	2.42E-4	51193
[View Peptides]	YLR312C	Putative protein of unknown function	1	1	4.3%	2.85E-4	46628
[View Peptides]	Reverse_YJR107W	YJR107W SGDID:S000003868, Chr X from 627254-628240, Uncharacterized ORF, "Putative protein of unknow...	1	1	4.3%	3.44E-4	37261
[View Peptides]	Reverse_YLR146C	SPE4 SGDID:S000004136, Chr XII from 433726-432824, reverse complement, Verified ORF, "Spermine synth...	1	1	4.3%	3.76E-4	34091
[View Peptides]	SEC53	Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose; required fo...	1	2	4.3%	8.92E-4	29063
[View Peptides]	Reverse_YMR255W	GFD1 SGDID:S000004868, Chr XIII from 778000-778566, Verified ORF, "Coiled-coiled protein of unknown ...	1	1	4.3%	5.99E-4	21571
[View Peptides]	UBI4	Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-...	1	5	4.2%	0.00149	42826
[View Peptides]	OYE3	Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN), homologous to Oye2p with slig...	1	1	4.2%	2.83E-4	44921
[View Peptides]	Reverse_YHR075C	PPE1 SGDID:S000001117, Chr VIII from 249643-248441, reverse complement, Verified ORF, "Protein with ...	1	1	4.2%	2.82E-4	44888
[View Peptides]	ADH6	NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity; member of the c...	1	1	4.2%	3.15E-4	39618
[View Peptides]	ERG25	C-4 methyl sterol oxidase, catalyzes the first of three steps required to remove two C-4 methyl grou...	1	1	4.2%	3.67E-4	36479
[View Peptides]	Reverse_YDL236W	PHO13 SGDID:S000002395, Chr IV from 32296-33234, Verified ORF, "Alkaline phosphatase specific for p-...	1	1	4.2%	3.62E-4	34625
[View Peptides]	ASI2	Integral inner nuclear membrane protein that acts with Asi1p and Asi3p to ensure the fidelity of SPS...	1	1	4.2%	3.92E-4	32986
[View Peptides]	STE14	Farnesyl cysteine-carboxyl methyltransferase, mediates the carboxyl methylation step during C-termin...	1	1	4.2%	4.74E-4	27888
[View Peptides]	IMP1	Catalytic subunit of the mitochondrial inner membrane peptidase complex, required for maturation of ...	1	1	4.2%	5.96E-4	21433
[View Peptides]	Reverse_YGL053W	PRM8 SGDID:S000003021, Chr VII from 402592-403305, Verified ORF, "Pheromone-regulated protein with 2...	1	1	4.2%	4.76E-4	27250
[View Peptides]	MET17	Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase), required for s...	1	1	4.1%	2.55E-4	48672
[View Peptides]	CTL1	RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm	1	1	4.1%	3.54E-4	36974
[View Peptides]	Reverse_YOR358W	HAP5 SGDID:S000005885, Chr XV from 1010157-1010885, Verified ORF, "Subunit of the heme-activated, gl...	1	1	4.1%	4.66E-4	27676
[View Peptides]	Reverse_YFR008W	FAR7 SGDID:S000001904, Chr VI from 160529-161194, Verified ORF, "Protein involved in G1 cell cycle a...	1	1	4.1%	5.1E-4	25915
[View Peptides]	PIR3	O-glycosylated covalently-bound cell wall protein required for cell wall stability; expression is ce...	1	1	4.0%	3.49E-4	33004
[View Peptides]	Reverse_YGR143W	SKN1 SGDID:S000003375, Chr VII from 775198-777513, Verified ORF, "Protein involved in sphingolipid b...	1	1	4.0%	1.47E-4	86241
[View Peptides]	WBP1	Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex; required for N-linked gly...	1	1	4.0%	2.63E-4	49392
[View Peptides]	Reverse_YBL069W	AST1 SGDID:S000000165, Chr II from 90739-92028, Verified ORF, "Peripheral membrane protein that inte...	1	1	4.0%	2.63E-4	48349
[View Peptides]	PMI40	Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P; requir...	1	1	4.0%	2.64E-4	48189
[View Peptides]	HAT2	Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of ...	1	1	4.0%	2.82E-4	45060
[View Peptides]	RNQ1	[PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate	1	1	4.0%	2.8E-4	42580
[View Peptides]	SFG1	Nuclear protein, putative transcription factor required for growth of superficial pseudohyphae (whic...	1	1	4.0%	3.27E-4	39021
[View Peptides]	SIS1	Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; not functionally redundant w...	1	1	4.0%	3.22E-4	37590
[View Peptides]	SGT2	Glutamine-rich cytoplasmic protein of unknown function; contains tetratricopeptide (TPR) repeats, wh...	1	1	4.0%	3.27E-4	37218
[View Peptides]	Reverse_YNL284C	MRPL10 SGDID:S000005228, Chr XIV from 104102-103134, reverse complement, Verified ORF, "Mitochondria...	1	1	4.0%	3.51E-4	36347
[View Peptides]	OAC1	Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, thiosulfate, and isoprop...	1	1	4.0%	3.5E-4	35153
[View Peptides]	RRP1	Essential evolutionarily conserved nucleolar protein necessary for biogenesis of 60S ribosomal subun...	1	1	4.0%	4.07E-4	33203
[View Peptides]	Reverse_YML115C	VAN1 SGDID:S000004583, Chr XIII from 41794-40187, reverse complement, Verified ORF, "Component of th...	1	1	3.9%	2.11E-4	61092
[View Peptides]	Reverse_YBR029C	CDS1 SGDID:S000000233, Chr II from 297742-296369, reverse complement, Verified ORF, "Phosphatidate c...	1	1	3.9%	2.47E-4	51823
[View Peptides]	RFM1	DNA-binding protein required for vegetative repression of middle sporulation genes; specificity fact...	1	1	3.9%	3.65E-4	35195
[View Peptides]	PIR1	O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-gluc...	1	1	3.8%	3.32E-4	34622
[View Peptides]	Reverse_YER086W	ILV1 SGDID:S000000888, Chr V from 328473-330203, Verified ORF, "Threonine deaminase, catalyzes the f...	1	1	3.8%	1.96E-4	63831
[View Peptides]	Reverse_YOR197W	MCA1 SGDID:S000005723, Chr XV from 717023-718384, Verified ORF, "Putative cysteine protease similar ...	1	1	3.8%	2.49E-4	50648
[View Peptides]	PDS1	Securin, inhibits anaphase by binding separin Esp1p; blocks cyclin destruction and mitotic exit, ess...	1	1	3.8%	3.04E-4	41838
[View Peptides]	ATP2	Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily c...	1	1	3.7%	2.22E-4	54794
[View Peptides]	Reverse_YBR287W	YBR287W SGDID:S000000491, Chr II from 776567-777850, Uncharacterized ORF, "Protein of unknown functi...	1	1	3.7%	2.65E-4	47506
[View Peptides]	TSR4	Cytoplasmic protein required for correct processing of the 20S pre-rRNA at site D to generate mature...	1	1	3.7%	2.78E-4	45994
[View Peptides]	SRP40	Nucleolar, serine-rich protein with a role in preribosome assembly or transport; may function as a c...	1	1	3.7%	2.79E-4	41015
[View Peptides]	Reverse_YHR143W	DSE2 SGDID:S000001186, Chr VIII from 385513-386490, Verified ORF, "Daughter cell-specific secreted p...	1	1	3.7%	3.47E-4	33417
[View Peptides]	Reverse_YGR280C	PXR1 SGDID:S000003512, Chr VII from 1051731-1050916, reverse complement, Verified ORF, "Essential pr...	1	1	3.7%	4.16E-4	31312
[View Peptides]	FUR1	Uracil phosphoribosyltransferase, synthesizes UMP from uracil; involved in the pyrimidine salvage pa...	1	1	3.7%	5.24E-4	24594
[View Peptides]	SET4	Protein of unknown function, contains a SET domain	1	1	3.6%	2.02E-4	63856
[View Peptides]	OCA4	Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae, which is a mode...	1	1	3.6%	3.13E-4	41647
[View Peptides]	PDB1	E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved mu...	1	1	3.6%	3.09E-4	40054
[View Peptides]	Reverse_YFR025C	HIS2 SGDID:S000001921, Chr VI from 204738-203731, reverse complement, Verified ORF, "Histidinolphosp...	1	1	3.6%	3.37E-4	38582
[View Peptides]	Reverse_YJL213W	YJL213W SGDID:S000003749, Chr X from 32163-33158, Uncharacterized ORF, "Hypothetical protein"	1	1	3.6%	3.41E-4	35905
[View Peptides]	Reverse_YDR123C	INO2 SGDID:S000002530, Chr IV from 699463-698549, reverse complement, Verified ORF, "Component of th...	1	1	3.6%	3.71E-4	34234
[View Peptides]	Reverse_YER116C	SLX8 SGDID:S000000918, Chr V from 396168-395344, reverse complement, Verified ORF, "Protein containi...	1	1	3.6%	4.12E-4	30764
[View Peptides]	TPI1	Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availabi...	1	1	3.6%	4.57E-4	26795
[View Peptides]	PDR1	Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins t...	1	1	3.5%	1.06E-4	121793
[View Peptides]	PGM3	Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate; transcr...	1	1	3.5%	1.82E-4	71069
[View Peptides]	CCT8	Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of...	1	1	3.5%	1.99E-4	61662
[View Peptides]	Reverse_YOR231W	MKK1 SGDID:S000005757, Chr XV from 772601-774127, Verified ORF, "Mitogen-activated kinase kinase inv...	1	1	3.5%	2.23E-4	56720
[View Peptides]	SPS22	Protein of unknown function, redundant with Sps2p for the organization of the beta-glucan layer of t...	1	1	3.5%	2.45E-4	52008
[View Peptides]	Reverse_YOR266W	PNT1 SGDID:S000005792, Chr XV from 821020-822291, Verified ORF, "Mitochondrial inner membrane protei...	1	1	3.5%	2.67E-4	48934
[View Peptides]	Reverse_YOR009W	TIR4 SGDID:S000005535, Chr XV from 344334-345797, Verified ORF, "Cell wall mannoprotein of the Srp1p...	1	3	3.5%	6.96E-4	47849
[View Peptides]	Reverse_YGL196W	YGL196W SGDID:S000003164, Chr VII from 129888-131174, Uncharacterized ORF, "Putative protein of unkn...	1	1	3.5%	2.64E-4	47828
[View Peptides]	PRS1	5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot...	1	1	3.5%	2.65E-4	47048
[View Peptides]	CIC1	Essential protein that interacts with proteasome components and has a potential role in proteasome s...	1	1	3.5%	3.01E-4	42530
[View Peptides]	Reverse_YGL040C	HEM2 SGDID:S000003008, Chr VII from 420561-419533, reverse complement, Verified ORF, "Delta-aminolev...	1	1	3.5%	3.3E-4	37740
[View Peptides]	Reverse_YKL019W	RAM2 SGDID:S000001502, Chr XI from 402211-403161, Verified ORF, "Alpha subunit of both the farnesylt...	1	1	3.5%	3.57E-4	37508
[View Peptides]	YMR206W	Putative protein of unknown function; YMR206W is not an essential gene	1	1	3.5%	3.62E-4	35018
[View Peptides]	PET9	Major ADP/ATP carrier of the mitochondrial inner membrane, exchanges cytosolic ADP for mitochondrial...	1	1	3.5%	3.56E-4	34426
[View Peptides]	PEP12	Target membrane receptor (t-SNARE) for vesicular intermediates traveling between the Golgi apparatus...	1	1	3.5%	3.93E-4	33006
[View Peptides]	Reverse_YEL005C	VAB2 SGDID:S000000731, Chr V from 146754-145906, reverse complement, Verified ORF, "Protein with a p...	1	1	3.5%	4.0E-4	31365
[View Peptides]	VMA8	Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a...	1	1	3.5%	4.42E-4	29194
[View Peptides]	HSP150	O-mannosylated heat shock protein that is secreted and covalently attached to the cell wall via beta...	1	1	3.4%	2.93E-4	38619
[View Peptides]	YGL176C	Putative protein of unknown function; deletion mutant is viable and has no detectable phenotype	1	1	3.4%	2.04E-4	63276
[View Peptides]	UGA2	Succinate semialdehyde dehydrogenase involved in the utilization of gamma-aminobutyrate (GABA) as a ...	1	1	3.4%	2.28E-4	54189
[View Peptides]	ERG24	C-14 sterol reductase, acts in ergosterol biosynthesis; mutants accumulate the abnormal sterol ignos...	1	1	3.4%	2.59E-4	50616
[View Peptides]	Reverse_YPR106W	ISR1 SGDID:S000006310, Chr XVI from 740059-741390, Verified ORF, "Predicted protein kinase, overexpr...	1	1	3.4%	2.55E-4	49736
[View Peptides]	GCD14	Subunit of tRNA (1-methyladenosine) methyltransferase, with Gcd10p, required for the modification of...	1	1	3.4%	2.96E-4	43920
[View Peptides]	MIG2	Protein containing zinc fingers, involved in repression, along with Mig1p, of SUC2 (invertase) expre...	1	1	3.4%	2.97E-4	42048
[View Peptides]	Reverse_YKR092C	SRP40 SGDID:S000001800, Chr XI from 613527-612307, reverse complement, Verified ORF, "Nucleolar, ser...	1	1	3.4%	2.78E-4	41015
[View Peptides]	RPA43	RNA polymerase I subunit A43	1	1	3.4%	3.47E-4	36224
[View Peptides]	Reverse_YBR265W	TSC10 SGDID:S000000469, Chr II from 738577-739539, Verified ORF, "3-ketosphinganine reductase, catal...	1	1	3.4%	3.53E-4	35987
[View Peptides]	Reverse_YAR031W	PRM9 SGDID:S000000078, Chr I from 186830-187726, Verified ORF, "Pheromone-regulated protein with 3 p...	1	1	3.4%	3.79E-4	35073
[View Peptides]	BRX1	Nucleolar protein, constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA pr...	1	1	3.4%	3.89E-4	33577
[View Peptides]	TRS33	One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates...	1	1	3.4%	4.23E-4	30749
[View Peptides]	Reverse_YBR169C	SSE2 SGDID:S000000373, Chr II from 575991-573910, reverse complement, Verified ORF, "Member of the h...	1	1	3.3%	1.63E-4	77621
[View Peptides]	RVS167	Actin-associated protein, interacts with Rvs161p to regulate actin cytoskeleton, endocytosis, and vi...	1	1	3.3%	2.35E-4	52774
[View Peptides]	HSE1	Subunit of the endosomal Vps27p-Hse1p complex required for sorting of ubiquitinated membrane protein...	1	1	3.3%	2.51E-4	51161
[View Peptides]	Reverse_YBR118W,...	TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified ORF, "Translational elongation factor EF-...	1	1	3.3%	2.47E-4	50033
[View Peptides]	MCR1	Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis	1	1	3.3%	3.75E-4	34138
[View Peptides]	Reverse_YEL038W	UTR4 SGDID:S000000764, Chr V from 80420-81145, Verified ORF, "Protein of unknown function, found in ...	1	1	3.3%	4.68E-4	26735
[View Peptides]	FAA4	Long chain fatty acyl-CoA synthetase, activates imported fatty acids with a preference for C12:0-C16...	1	1	3.2%	1.63E-4	77267
[View Peptides]	Reverse_YKR058W	GLG1 SGDID:S000001766, Chr XI from 552412-554262, Verified ORF, "Self-glucosylating initiator of gly...	1	1	3.2%	1.84E-4	69724
[View Peptides]	YHR202W	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...	1	1	3.2%	1.88E-4	68998
[View Peptides]	Reverse_YJL016W	YJL016W SGDID:S000003553, Chr X from 405504-407189, Uncharacterized ORF, "Cytoplasmic protein of unk...	1	1	3.2%	2.02E-4	63207
[View Peptides]	NUP60	Subunit of the nuclear pore complex (NPC), functions to anchor Nup2p to the NPC in a process control...	1	1	3.2%	2.1E-4	59039
[View Peptides]	Reverse_YLR116W	MSL5 SGDID:S000004106, Chr XII from 380823-382253, Verified ORF, "Component of the commitment comple...	1	1	3.2%	2.37E-4	53034
[View Peptides]	MCK1	Protein serine/threonine/tyrosine (dual-specificity) kinase involved in control of chromosome segreg...	1	1	3.2%	3.02E-4	43136
[View Peptides]	Reverse_YEL004W	YEA4 SGDID:S000000730, Chr V from 146950-147978, Verified ORF, "Uridine diphosphate-N-acetylglucosam...	1	1	3.2%	3.3E-4	39266
[View Peptides]	Reverse_YMR315W	YMR315W SGDID:S000004932, Chr XIII from 902799-903848, Uncharacterized ORF, "Hypothetical protein"	1	1	3.2%	3.24E-4	38216
[View Peptides]	RFC3	Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase t...	1	2	3.2%	6.66E-4	38204
[View Peptides]	GLC7	Type 1 serine/threonine protein phosphatase catalytic subunit, involved in many processes (eg: glyco...	1	1	3.2%	3.63E-4	35907
[View Peptides]	AIM33	Putative protein of unknown function, highly conserved across species and orthologous to human CYB5R...	1	1	3.2%	3.63E-4	35764
[View Peptides]	Reverse_YHR142W	CHS7 SGDID:S000001184, Chr VIII from 383541-384491, Verified ORF, "Protein of unknown function, invo...	1	1	3.2%	3.57E-4	34898
[View Peptides]	Reverse_YDL222C	FMP45 SGDID:S000002381, Chr IV from 61802-60873, reverse complement, Uncharacterized ORF, "The authe...	1	1	3.2%	3.65E-4	34135
[View Peptides]	PNP1	Purine nucleoside phosphorylase, specifically metabolizes inosine and guanosine nucleosides; involve...	1	1	3.2%	3.64E-4	33755
[View Peptides]	ALP1	Arginine transporter; expression is normally very low and it is unclear what conditions would induce...	1	1	3.1%	1.98E-4	64014
[View Peptides]	ILV1	Threonine deaminase, catalyzes the first step in isoleucine biosynthesis; expression is under genera...	1	1	3.1%	1.97E-4	63831
[View Peptides]	PEX29	Peroxisomal integral membrane peroxin, involved in the regulation of peroxisomal size, number and di...	1	1	3.1%	2.04E-4	63543
[View Peptides]	Reverse_YPL258C	THI21 SGDID:S000006179, Chr XVI from 55153-53498, reverse complement, Verified ORF, "Hydroxymethylpy...	1	1	3.1%	2.05E-4	61334
[View Peptides]	Reverse_YJR015W	YJR015W SGDID:S000003776, Chr X from 462635-464167, Uncharacterized ORF, "Hypothetical protein"	1	1	3.1%	2.22E-4	58117
[View Peptides]	Reverse_YGL097W	SRM1 SGDID:S000003065, Chr VII from 321785-323233, Verified ORF, "Nucleotide exchange factor for Gsp...	1	1	3.1%	2.35E-4	53014
[View Peptides]	BNA5	Kynureninase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expressio...	1	1	3.1%	2.5E-4	51032
[View Peptides]	YBR271W	Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green flu...	1	1	3.1%	2.7E-4	47977
[View Peptides]	Reverse_YOR196C	LIP5 SGDID:S000005722, Chr XV from 716837-715593, reverse complement, Verified ORF, "Protein involve...	1	1	3.1%	2.73E-4	46247
[View Peptides]	SUR1	Probable catalytic subunit of a mannosylinositol phosphorylceramide (MIPC) synthase, forms a complex...	1	1	3.1%	2.97E-4	44808
[View Peptides]	Reverse_YAL060W	BDH1 SGDID:S000000056, Chr I from 35156-36304, Verified ORF, "NAD-dependent (2R,3R)-2,3-butanediol d...	1	1	3.1%	2.96E-4	41538
[View Peptides]	DCS1	Non-essential hydrolase involved in mRNA decapping, may function in a feedback mechanism to regulate...	1	1	3.1%	3.24E-4	40770
[View Peptides]	IDH1	Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of...	1	1	3.1%	3.15E-4	39324
[View Peptides]	MET22	Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis; dephosphorylates...	1	1	3.1%	3.17E-4	39149
[View Peptides]	IES2	Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions; essen...	1	1	3.1%	3.54E-4	36154
[View Peptides]	YJR011C	Putative protein of unknown function; GFP-fusion protein expression is induced in response to the DN...	1	1	3.1%	4.34E-4	30473
[View Peptides]	Reverse_YPL277C	YPL277C SGDID:S000006198, Chr XVI from 16868-15405, reverse complement, Uncharacterized ORF, "Hypoth...	1	1	3.1%	2.32E-4	54538
[View Peptides]	PSP2	Asn rich cytoplasmic protein that contains RGG motifs; high-copy suppressor of group II intron-splic...	1	1	3.0%	1.91E-4	65584
[View Peptides]	Reverse_YBR180W	DTR1 SGDID:S000000384, Chr II from 589736-591454, Verified ORF, "Multidrug resistance dityrosine tra...	1	1	3.0%	1.98E-4	63407
[View Peptides]	Reverse_YER014W	HEM14 SGDID:S000000816, Chr V from 182599-184218, Verified ORF, "Protoporphyrinogen oxidase, a mitoc...	1	1	3.0%	2.1E-4	59703
[View Peptides]	Reverse_YOR032C	HMS1 SGDID:S000005558, Chr XV from 391074-389770, reverse complement, Verified ORF, "Basic helix-loo...	1	1	3.0%	2.6E-4	48871
[View Peptides]	Reverse_YOR393W,...	ERR1 SGDID:S000005920, Chr XV from 1080272-1081585, Verified ORF, "Protein of unknown function, has ...	1	1	3.0%	2.59E-4	47328
[View Peptides]	Reverse_YMR323W	ERR3 SGDID:S000004942, Chr XIII from 920086-921399, Verified ORF, "Protein of unknown function, has ...	1	1	3.0%	2.59E-4	47313
[View Peptides]	Reverse_YMR173W	DDR48 SGDID:S000004784, Chr XIII from 608688-609980, Verified ORF, "DNA damage-responsive protein, e...	1	2	3.0%	5.26E-4	46233
[View Peptides]	Reverse_YOL018C	TLG2 SGDID:S000005378, Chr XV from 292074-290881, reverse complement, Verified ORF, "Syntaxin-like t...	1	1	3.0%	2.85E-4	45875
[View Peptides]	OYE2	Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN), homologous to Oye3p wi...	1	1	3.0%	2.83E-4	45011
[View Peptides]	Reverse_YNL042W	BOP3 SGDID:S000004987, Chr XIV from 548101-549291, Verified ORF, "Protein of unknown function, poten...	1	1	3.0%	2.85E-4	43749
[View Peptides]	YIL096C	Putative protein of unknown function; associates with precursors of the 60S ribosomal subunit; predi...	1	1	3.0%	3.37E-4	39402
[View Peptides]	YBR141C	Putative S-adenosylmethionine-dependent methyltransferase; green fluorescent protein (GFP)-fusion pr...	1	1	3.0%	3.36E-4	38540
[View Peptides]	Reverse_YPL132W	COX11 SGDID:S000006053, Chr XVI from 301715-302617, Verified ORF, "Mitochondrial inner membrane prot...	1	1	3.0%	3.76E-4	34044
[View Peptides]	DIC1	Mitochondrial dicarboxylate carrier, integral membrane protein, catalyzes a dicarboxylate-phosphate ...	1	1	3.0%	3.8E-4	32992
[View Peptides]	TAE1	AdoMet-dependent proline methyltransferase; catalyzes the dimethylation of ribosomal proteins Rpl12 ...	1	1	3.0%	4.88E-4	26068
[View Peptides]	CRN1	Coronin, cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regul...	1	1	2.9%	1.74E-4	72553
[View Peptides]	Reverse_YNL117W	MLS1 SGDID:S000005061, Chr XIV from 406360-408024, Verified ORF, "Malate synthase, enzyme of the gly...	1	1	2.9%	2.04E-4	62791
[View Peptides]	ALD4	Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde ...	1	1	2.9%	2.18E-4	56724
[View Peptides]	Reverse_YER045C	ACA1 SGDID:S000000847, Chr V from 241500-240031, reverse complement, Verified ORF, "Basic leucine zi...	1	1	2.9%	2.31E-4	54592
[View Peptides]	Reverse_YDL161W	ENT1 SGDID:S000002320, Chr IV from 167715-169079, Verified ORF, "Epsin-like protein involved in endo...	1	1	2.9%	2.49E-4	52352
[View Peptides]	GAS5	1,3-beta-glucanosyltransferase, has similarity to Gas1p; localizes to the cell wall	1	1	2.9%	2.34E-4	51870
[View Peptides]	EMP46	Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles, which function i...	1	1	2.9%	2.55E-4	50947
[View Peptides]	MGA1	Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defe...	1	1	2.9%	2.48E-4	50735
[View Peptides]	Reverse_YCL044C	MGR1 SGDID:S000000549, Chr III from 48364-47111, reverse complement, Verified ORF, "Subunit, with Ym...	1	2	2.9%	5.42E-4	47156
[View Peptides]	Reverse_YDL193W	YDL193W SGDID:S000002352, Chr IV from 114673-115800, Uncharacterized ORF, "Prenyltransferase, requir...	1	1	2.9%	3.01E-4	42557
[View Peptides]	Reverse_YPL244C	HUT1 SGDID:S000006165, Chr XVI from 88033-87014, reverse complement, Verified ORF, "Protein with a r...	1	1	2.9%	3.33E-4	38075
[View Peptides]	Reverse_YKL091C	YKL091C SGDID:S000001574, Chr XI from 270294-269362, reverse complement, Verified ORF, "Putative hom...	1	1	2.9%	3.64E-4	36073
[View Peptides]	YPR1	NADPH-dependent aldo-keto reductase, reduces multiple substrates including 2-methylbutyraldehyde and...	1	1	2.9%	3.63E-4	34755
[View Peptides]	YHM2	Carrier protein that exports citrate from and imports oxoglutarate into the mitochondrion, causing n...	1	1	2.9%	3.61E-4	34185
[View Peptides]	MPD2	Member of the protein disulfide isomerase (PDI) family, exhibits chaperone activity; overexpression ...	1	1	2.9%	4.09E-4	32401
[View Peptides]	Reverse_YHR056C	RSC30 SGDID:S000001098, Chr VIII from 217836-215185, reverse complement, Verified ORF, "One of 15 su...	1	1	2.8%	1.28E-4	101335
[View Peptides]	ACS1	Acetyl-coA synthetase isoform which, along with Acs2p, is the nuclear source of acetyl-coA for histo...	1	1	2.8%	1.59E-4	79141
[View Peptides]	PTR2	Integral membrane peptide transporter, mediates transport of di- and tri-peptides; conserved protein...	1	1	2.8%	1.88E-4	68044
[View Peptides]	Reverse_YLR015W	BRE2 SGDID:S000004005, Chr XII from 175226-176743, Verified ORF, "Subunit of the COMPASS (Set1C) com...	1	1	2.8%	2.24E-4	58347
[View Peptides]	NPP2	Nucleotide pyrophosphatase/phosphodiesterase family member; mediates extracellular nucleotide phosph...	1	1	2.8%	2.3E-4	57355
[View Peptides]	Reverse_YKL082C	RRP14 SGDID:S000001565, Chr XI from 281973-280669, reverse complement, Uncharacterized ORF, "Essenti...	1	1	2.8%	2.6E-4	50482
[View Peptides]	EBP2	Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly, locali...	1	1	2.8%	2.65E-4	49734
[View Peptides]	HES1	Protein implicated in the regulation of ergosterol biosynthesis; one of a seven member gene family w...	1	1	2.8%	2.61E-4	49505
[View Peptides]	IDP1	Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate to alpha...	1	1	2.8%	2.65E-4	48190
[View Peptides]	RNR2	Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiti...	1	1	2.8%	2.84E-4	46147
[View Peptides]	POG1	Putative transcriptional activator that promotes recovery from pheromone induced arrest; inhibits bo...	1	1	2.8%	3.23E-4	39498
[View Peptides]	ADH5	Alcohol dehydrogenase isoenzyme V; involved in ethanol production	1	1	2.8%	3.23E-4	37648
[View Peptides]	RLP7	Nucleolar protein with similarity to large ribosomal subunit L7 proteins; constituent of 66S pre-rib...	1	1	2.8%	3.52E-4	36559
[View Peptides]	YPC1	Alkaline ceramidase that also has reverse (CoA-independent) ceramide synthase activity, catalyzes bo...	1	1	2.8%	3.58E-4	36420
[View Peptides]	YGL081W	Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene in...	1	1	2.8%	3.54E-4	36390
[View Peptides]	Reverse_YOR040W	GLO4 SGDID:S000005566, Chr XV from 407063-407920, Verified ORF, "Mitochondrial glyoxalase II, cataly...	1	1	2.8%	3.96E-4	32339
[View Peptides]	Reverse_YIL144W	TID3 SGDID:S000001406, Chr IX from 78074-80149, Verified ORF, "Component of the evolutionarily conse...	1	1	2.7%	1.64E-4	80487
[View Peptides]	Reverse_YKL220C	FRE2 SGDID:S000001703, Chr XI from 11227-9092, reverse complement, Verified ORF, "Ferric reductase a...	1	1	2.7%	1.59E-4	80072
[View Peptides]	RSC8	Component of the RSC chromatin remodeling complex; essential for viability and mitotic growth; homol...	1	1	2.7%	2.03E-4	63168
[View Peptides]	Reverse_YKR072C	SIS2 SGDID:S000001780, Chr XI from 577765-576077, reverse complement, Verified ORF, "Negative regula...	1	1	2.7%	2.01E-4	62478
[View Peptides]	PPQ1	Putative protein serine/threonine phosphatase; null mutation enhances efficiency of translational su...	1	1	2.7%	2.06E-4	61421
[View Peptides]	Reverse_YJL111W	CCT7 SGDID:S000003647, Chr X from 207794-209446, Verified ORF, "Subunit of the cytosolic chaperonin ...	1	1	2.7%	2.06E-4	59736
[View Peptides]	TOD6	PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone dea...	1	1	2.7%	2.16E-4	59226
[View Peptides]	ARP7	Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved...	1	1	2.7%	2.37E-4	53810
[View Peptides]	ERG12	Mevalonate kinase, acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from m...	1	1	2.7%	2.56E-4	48460
[View Peptides]	RPA49	RNA polymerase I subunit A49	1	1	2.7%	2.73E-4	46651
[View Peptides]	Reverse_YGL048C,...	RPT6 SGDID:S000003016, Chr VII from 411289-410072, reverse complement, Verified ORF, "One of six ATP...	1	1	2.7%	2.79E-4	45272
[View Peptides]	Reverse_YOR388C	FDH1 SGDID:S000005915, Chr XV from 1072919-1071789, reverse complement, Verified ORF, "NAD(+)-depend...	1	1	2.7%	3.0E-4	41714
[View Peptides]	RCL1	Subunit of U3-containing 90S preribosome processome complex involved in 18S rRNA biogenesis and smal...	1	1	2.7%	3.09E-4	40171
[View Peptides]	LYS12	Homo-isocitrate dehydrogenase, an NAD-linked mitochondrial enzyme required for the fourth step in th...	1	1	2.7%	3.05E-4	40069
[View Peptides]	JID1	Probable Hsp40p co-chaperone, has a DnaJ-like domain and appears to be involved in ER-associated deg...	1	1	2.7%	3.76E-4	35028
[View Peptides]	Reverse_YML112W	CTK3 SGDID:S000004580, Chr XIII from 45063-45953, Verified ORF, "Gamma subunit of C-terminal domain ...	1	1	2.7%	3.81E-4	34809
[View Peptides]	SPE4	Spermine synthase, required for the biosynthesis of spermine and also involved in biosynthesis of pa...	1	1	2.7%	3.78E-4	34091
[View Peptides]	Reverse_YJL098W	SAP185 SGDID:S000003634, Chr X from 241999-245175, Verified ORF, "Protein that forms a complex with ...	1	1	2.6%	1.07E-4	121402
[View Peptides]	Reverse_YOL063C	YOL063C SGDID:S000005424, Chr XV from 210264-207391, reverse complement, Uncharacterized ORF, "Prote...	1	1	2.6%	1.18E-4	109715
[View Peptides]	TCO89	Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), a complex that regulates growth in response to...	1	1	2.6%	1.42E-4	88845
[View Peptides]	YJL206C	Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] bi...	1	1	2.6%	1.49E-4	86663
[View Peptides]	SEC63	Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61 complex, Kar2p/Bi...	1	1	2.6%	1.71E-4	75345
[View Peptides]	PES4	Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p	1	1	2.6%	1.85E-4	70842
[View Peptides]	MSM1	Mitochondrial methionyl-tRNA synthetase (MetRS), functions as a monomer in mitochondrial protein syn...	1	1	2.6%	1.97E-4	66735
[View Peptides]	MUP1	High affinity methionine permease, integral membrane protein with 13 putative membrane-spanning regi...	1	1	2.6%	1.97E-4	63221
[View Peptides]	Reverse_YMR290C	HAS1 SGDID:S000004903, Chr XIII from 851590-850073, reverse complement, Verified ORF, "ATP-dependent...	1	1	2.6%	2.24E-4	56718
[View Peptides]	Reverse_YCL040W	GLK1 SGDID:S000000545, Chr III from 50838-52340, Verified ORF, "Glucokinase, catalyzes the phosphory...	1	1	2.6%	2.26E-4	55377
[View Peptides]	ERG13	3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co...	1	1	2.6%	2.31E-4	55014
[View Peptides]	Reverse_YPR152C	YPR152C SGDID:S000006356, Chr XVI from 833454-832057, reverse complement, Uncharacterized ORF, "Hypo...	1	1	2.6%	2.43E-4	54139
[View Peptides]	TDA6	Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiatio...	1	1	2.6%	2.43E-4	53809
[View Peptides]	Reverse_YNL016W	PUB1 SGDID:S000004961, Chr XIV from 602908-604269, Verified ORF, "Poly(A)+ RNA-binding protein, abun...	1	1	2.6%	2.49E-4	50763
[View Peptides]	Reverse_YNL230C	ELA1 SGDID:S000005174, Chr XIV from 218663-217524, reverse complement, Verified ORF, "Elongin A, F-b...	1	1	2.6%	2.98E-4	43981
[View Peptides]	DAL2	Allantoicase, converts allantoate to urea and ureidoglycolate in the second step of allantoin degrad...	1	1	2.6%	3.3E-4	38714
[View Peptides]	Reverse_YPR127W	YPR127W SGDID:S000006331, Chr XVI from 790079-791116, Uncharacterized ORF, "Hypothetical protein"	1	1	2.6%	3.27E-4	38601
[View Peptides]	YGR283C	Protein of unknown function; may interact with ribosomes, based on co-purification experiments; pred...	1	1	2.6%	3.32E-4	38546
[View Peptides]	Reverse_YGR104C	SRB5 SGDID:S000003336, Chr VII from 698372-697449, reverse complement, Verified ORF, "Subunit of the...	1	1	2.6%	3.68E-4	34289
[View Peptides]	TOP1	Topoisomerase I, nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the...	1	1	2.5%	1.47E-4	89995
[View Peptides]	LCB5	Minor sphingoid long-chain base kinase, paralog of Lcb4p responsible for few percent of the total ac...	1	1	2.5%	1.65E-4	77566
[View Peptides]	Reverse_YOL148C	SPT20 SGDID:S000005508, Chr XV from 47572-45758, reverse complement, Verified ORF, "Subunit of the S...	1	1	2.5%	1.87E-4	67797
[View Peptides]	CDC3	Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recrui...	1	1	2.5%	2.18E-4	60039
[View Peptides]	Reverse_YCL027W	FUS1 SGDID:S000000532, Chr III from 71803-73341, Verified ORF, "Membrane protein localized to the sh...	1	1	2.5%	2.21E-4	57779
[View Peptides]	VMA13	Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a...	1	1	2.5%	2.37E-4	54416
[View Peptides]	COS9	Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-enc...	1	1	2.5%	2.78E-4	48545
[View Peptides]	Reverse_YBL013W	FMT1 SGDID:S000000109, Chr II from 202059-203264, Verified ORF, "Methionyl-tRNA formyltransferase, c...	1	1	2.5%	2.82E-4	44617
[View Peptides]	AME1	Essential kinetochore protein associated with microtubules and spindle pole bodies; component of the...	1	1	2.5%	3.5E-4	37462
[View Peptides]	PRS3	5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot...	1	1	2.5%	3.54E-4	35124
[View Peptides]	Reverse_YOL095C	HMI1 SGDID:S000005455, Chr XV from 141346-139226, reverse complement, Verified ORF, "Mitochondrial i...	1	1	2.4%	1.6E-4	80576
[View Peptides]	Reverse_YGR178C	PBP1 SGDID:S000003410, Chr VII from 853220-851052, reverse complement, Verified ORF, "Protein intera...	1	1	2.4%	1.57E-4	78781
[View Peptides]	HDA2	Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex conta...	1	1	2.4%	1.68E-4	77059
[View Peptides]	Reverse_YOR389W	YOR389W SGDID:S000005916, Chr XV from 1074209-1076083, Uncharacterized ORF, "Hypothetical protein"	1	1	2.4%	1.81E-4	70221
[View Peptides]	Reverse_YBR200W	BEM1 SGDID:S000000404, Chr II from 620867-622522, Verified ORF, "Protein containing SH3-domains, inv...	1	1	2.4%	2.05E-4	61605
[View Peptides]	FCJ1	Mitochondrial inner membrane protein involved in formation and molecular structure of crista junctio...	1	1	2.4%	2.1E-4	61082
[View Peptides]	PRC1	Vacuolar carboxypeptidase Y (proteinase C; CPY), broad-specificity C-terminal exopeptidase involved ...	1	1	2.4%	2.13E-4	59802
[View Peptides]	ATP1	Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily ...	1	1	2.4%	2.08E-4	58618
[View Peptides]	Reverse_YLR227C	ADY4 SGDID:S000004217, Chr XII from 592045-590564, reverse complement, Verified ORF, "Structural com...	1	1	2.4%	2.29E-4	57833
[View Peptides]	GAT1	Transcriptional activator of genes involved in nitrogen catabolite repression; contains a GATA-1-typ...	1	1	2.4%	2.22E-4	56328
[View Peptides]	YEF1	ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subu...	1	1	2.4%	2.29E-4	55874
[View Peptides]	Reverse_YPR157W	YPR157W SGDID:S000006361, Chr XVI from 841262-842665, Uncharacterized ORF, "Hypothetical protein"	1	1	2.4%	2.42E-4	53809
[View Peptides]	MEP2	Ammonium permease involved in regulation of pseudohyphal growth; belongs to a ubiquitous family of c...	1	1	2.4%	2.27E-4	53401
[View Peptides]	TRM12	S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; required for wybut...	1	1	2.4%	2.45E-4	52727
[View Peptides]	NSA1	Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis	1	1	2.4%	2.45E-4	51907
[View Peptides]	Reverse_YER027C	GAL83 SGDID:S000000829, Chr V from 210231-208978, reverse complement, Verified ORF, "One of three po...	1	1	2.4%	2.71E-4	46648
[View Peptides]	YPR078C	Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; ex...	1	1	2.4%	3.04E-4	42594
[View Peptides]	RBG2	Protein with similarity to mammalian developmentally regulated GTP-binding protein	1	1	2.4%	3.08E-4	41006
[View Peptides]	SEC23	GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p h...	1	1	2.3%	1.47E-4	85385
[View Peptides]	Reverse_YBL060W	YBL060W SGDID:S000000156, Chr II from 107934-109997, Uncharacterized ORF, "Hypothetical protein"	1	1	2.3%	1.65E-4	78768
[View Peptides]	PLB3	Phospholipase B (lysophospholipase) involved in phospholipid metabolism; hydrolyzes phosphatidylinos...	1	1	2.3%	1.65E-4	75077
[View Peptides]	ILV2	Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis and is ...	1	1	2.3%	1.65E-4	74937
[View Peptides]	ARB1	ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis, has sim...	1	1	2.3%	1.86E-4	68377
[View Peptides]	Reverse_YLR055C	SPT8 SGDID:S000004045, Chr XII from 253081-251273, reverse complement, Verified ORF, "Subunit of the...	1	1	2.3%	1.88E-4	66190
[View Peptides]	PAP1	Poly(A) polymerase, one of three factors required for mRNA 3'-end polyadenylation, forms multiprotei...	1	1	2.3%	1.99E-4	64552
[View Peptides]	Reverse_YJL219W	HXT9 SGDID:S000003755, Chr X from 19497-21200, Verified ORF, "Putative hexose transporter that is ne...	1	1	2.3%	1.99E-4	62858
[View Peptides]	Reverse_YOL156W	HXT11 SGDID:S000005516, Chr XV from 25272-26975, Verified ORF, "Putative hexose transporter that is ...	1	1	2.3%	1.99E-4	62733
[View Peptides]	PCM1	Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precur...	1	1	2.3%	2.03E-4	62067
[View Peptides]	Reverse_YHR207C	SET5 SGDID:S000001250, Chr VIII from 516485-514905, reverse complement, Verified ORF, "Zinc-finger p...	1	1	2.3%	2.15E-4	60547
[View Peptides]	Reverse_YBL019W	APN2 SGDID:S000000115, Chr II from 184356-185918, Verified ORF, "Class II abasic (AP) endonuclease i...	1	1	2.3%	2.17E-4	59445
[View Peptides]	CTA1	Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1...	1	1	2.3%	2.2E-4	58555
[View Peptides]	Reverse_YMR217W	GUA1 SGDID:S000004830, Chr XIII from 701789-703366, Verified ORF, "GMP synthase, an enzyme that cata...	1	1	2.3%	2.15E-4	58482
[View Peptides]	Reverse_YER025W	GCD11 SGDID:S000000827, Chr V from 205250-206833, Verified ORF, "Gamma subunit of the translation in...	1	1	2.3%	2.15E-4	57866
[View Peptides]	LAP4	Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often...	1	1	2.3%	2.2E-4	57093
[View Peptides]	RIO1	Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into m...	1	1	2.3%	2.34E-4	56122
[View Peptides]	Reverse_YGL012W	ERG4 SGDID:S000002980, Chr VII from 472860-474281, Verified ORF, "C-24(28) sterol reductase, catalyz...	1	1	2.3%	2.39E-4	56040
[View Peptides]	MDJ1	Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p; involved in protein fol...	1	1	2.3%	2.22E-4	55561
[View Peptides]	Reverse_YGR019W	UGA1 SGDID:S000003251, Chr VII from 525233-526648, Verified ORF, "Gamma-aminobutyrate (GABA) transam...	1	1	2.3%	2.4E-4	52946
[View Peptides]	Reverse_YDR388W	RVS167 SGDID:S000002796, Chr IV from 1250176-1251624, Verified ORF, "Actin-associated protein, subun...	1	1	2.3%	2.35E-4	52774
[View Peptides]	Reverse_YBR003W	COQ1 SGDID:S000000207, Chr II from 242811-244232, Verified ORF, "Hexaprenyl pyrophosphate synthetase...	1	1	2.3%	2.39E-4	52560
[View Peptides]	LAT1	Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes...	1	1	2.3%	2.35E-4	51818
[View Peptides]	ERG9	Farnesyl-diphosphate farnesyl transferase (squalene synthase), joins two farnesyl pyrophosphate moie...	1	2	2.3%	5.1E-4	51720
[View Peptides]	Reverse_YLR360W	VPS38 SGDID:S000004352, Chr XII from 846102-847421, Verified ORF, "Part of a Vps34p phosphatidylinos...	1	1	2.3%	2.57E-4	50860
[View Peptides]	TAF4	TFIID subunit (48 kDa), involved in RNA polymerase II transcription initiation; potential Cdc28p sub...	1	1	2.3%	2.92E-4	42336
[View Peptides]	STB6	Protein that binds Sin3p in a two-hybrid assay	1	1	2.2%	1.48E-4	88836
[View Peptides]	Reverse_YBR015C	MNN2 SGDID:S000000219, Chr II from 269503-267710, reverse complement, Verified ORF, "Alpha-1,2-manno...	1	1	2.2%	1.89E-4	67774
[View Peptides]	SGO1	Component of the spindle checkpoint, involved in sensing lack of tension on mitotic chromosomes; pro...	1	1	2.2%	1.92E-4	66706
[View Peptides]	GLE1	Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import; component...	1	1	2.2%	2.11E-4	62073
[View Peptides]	Reverse_YMR279C	YMR279C SGDID:S000004892, Chr XIII from 826350-824728, reverse complement, Uncharacterized ORF, "Hyp...	1	1	2.2%	2.09E-4	59562
[View Peptides]	FMP42	Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...	1	1	2.2%	2.25E-4	56178
[View Peptides]	Reverse_YBL098W	BNA4 SGDID:S000000194, Chr II from 39142-40524, Verified ORF, "Kynurenine 3-mono oxygenase, required...	1	1	2.2%	2.46E-4	52430
[View Peptides]	RVB1	Essential protein involved in transcription regulation; component of chromatin remodeling complexes;...	1	1	2.2%	2.45E-4	50453
[View Peptides]	GDH3	NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarat...	1	1	2.2%	2.48E-4	49627
[View Peptides]	GDH1	NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarat...	1	1	2.2%	2.49E-4	49570
[View Peptides]	SAH1	S-adenosyl-L-homocysteine hydrolase, catabolizes S-adenosyl-L-homocysteine which is formed after don...	1	1	2.2%	2.52E-4	49126
[View Peptides]	Reverse_YPL060W	LPE10 SGDID:S000005981, Chr XVI from 434520-435761, Verified ORF, "Mitochondrial inner membrane magn...	1	1	2.2%	2.74E-4	47083
[View Peptides]	Reverse_YKR053C	YSR3 SGDID:S000001761, Chr XI from 534923-533709, reverse complement, Verified ORF, "Dihydrosphingos...	1	1	2.2%	2.8E-4	46488
[View Peptides]	DMA1	Protein involved in ubiquitin ligation; plays a role in regulating spindle position and orientation;...	1	1	2.2%	2.72E-4	46098
[View Peptides]	RIM11	Protein kinase required for signal transduction during entry into meiosis; promotes the formation of...	1	1	2.2%	3.06E-4	43005
[View Peptides]	ADH7	NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity; member of the c...	1	1	2.2%	3.14E-4	39349
[View Peptides]	MPS3	Nuclear envelope protein required for SPB duplication and nuclear fusion; localizes to the SPB half ...	1	1	2.1%	1.66E-4	79175
[View Peptides]	GPI10	Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis; putative ...	1	2	2.1%	3.68E-4	72566
[View Peptides]	APM2	Protein of unknown function, homologous to the medium chain of mammalian clathrin-associated protein...	1	2	2.1%	3.74E-4	69990
[View Peptides]	RCK2	Protein kinase involved in the response to oxidative and osmotic stress; identified as suppressor of...	1	1	2.1%	1.86E-4	68062
[View Peptides]	Reverse_YJL105W	SET4 SGDID:S000003641, Chr X from 224972-226654, Verified ORF, "Protein of unknown function, contain...	1	1	2.1%	2.02E-4	63856
[View Peptides]	Reverse_YHR170W	NMD3 SGDID:S000001213, Chr VIII from 443829-445385, Verified ORF, "Protein involved in nuclear expor...	1	1	2.1%	2.18E-4	59095
[View Peptides]	CCT2	Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assemb...	1	1	2.1%	2.15E-4	57203
[View Peptides]	CBF5	Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (s...	1	1	2.1%	2.35E-4	54705
[View Peptides]	TRP3	Bifunctional enzyme exhibiting both indole-3-glycerol-phosphate synthase and anthranilate synthase a...	1	1	2.1%	2.34E-4	53489
[View Peptides]	YNL234W	Protein of unknown function with similarity to globins; has a functional heme-binding domain; transc...	1	1	2.1%	2.66E-4	47823
[View Peptides]	DYS1	Deoxyhypusine synthase, catalyzes formation of deoxyhypusine, the first step in hypusine biosynthesi...	1	1	2.1%	2.93E-4	42892
[View Peptides]	Reverse_YBL031W	SHE1 SGDID:S000000127, Chr II from 161702-162718, Verified ORF, "Cytoskeletal protein of unknown fun...	1	1	2.1%	3.34E-4	38015
[View Peptides]	UBP7	Ubiquitin-specific protease that cleaves ubiquitin-protein fusions	1	1	2.0%	1.06E-4	123134
[View Peptides]	Reverse_YJL157C	FAR1 SGDID:S000003693, Chr X from 126245-123753, reverse complement, Verified ORF, "Cyclin-dependent...	1	1	2.0%	1.36E-4	94572
[View Peptides]	DEF1	RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...	1	1	2.0%	1.53E-4	83973
[View Peptides]	GUT1	Glycerol kinase, converts glycerol to glycerol-3-phosphate; glucose repression of expression is medi...	1	1	2.0%	1.6E-4	79824
[View Peptides]	Reverse_YBR255W	YBR255W SGDID:S000000459, Chr II from 724451-726535, Uncharacterized ORF, "Protein of unknown functi...	1	1	2.0%	1.63E-4	79028
[View Peptides]	NOG1	Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus and is required fo...	1	1	2.0%	1.75E-4	74410
[View Peptides]	GPI16	Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex that adds GPI...	1	1	2.0%	1.86E-4	68771
[View Peptides]	Reverse_YOR154W	YOR154W SGDID:S000005680, Chr XV from 624729-626492, Uncharacterized ORF, "Hypothetical protein"	1	1	2.0%	1.93E-4	67452
[View Peptides]	NRT1	High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; shares ...	1	1	2.0%	1.89E-4	67194
[View Peptides]	NOT5	Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip...	1	1	2.0%	2.02E-4	65855
[View Peptides]	DPL1	Dihydrosphingosine phosphate lyase, regulates intracellular levels of sphingolipid long-chain base p...	1	1	2.0%	1.92E-4	65566
[View Peptides]	NOC4	Nucleolar protein, forms a complex with Nop14p that mediates maturation and nuclear export of 40S ri...	1	1	2.0%	2.05E-4	63637
[View Peptides]	Reverse_YJR131W	MNS1 SGDID:S000003892, Chr X from 667559-669208, Verified ORF, "Alpha-1,2-mannosidase involved in ER...	1	1	2.0%	2.06E-4	63057
[View Peptides]	IZH3	Membrane protein involved in zinc ion homeostasis, member of the four-protein IZH family, expression...	1	1	2.0%	2.09E-4	62571
[View Peptides]	CCT5	Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of...	1	1	2.0%	2.02E-4	61914
[View Peptides]	SRP1	Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p to mediate import of nuclear p...	1	1	2.0%	2.09E-4	60441
[View Peptides]	SKS1	Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucos...	1	1	2.0%	2.26E-4	57844
[View Peptides]	MSY1	Mitochondrial tyrosyl-tRNA synthetase	1	1	2.0%	2.3E-4	55287
[View Peptides]	Reverse_YBL082C	ALG3 SGDID:S000000178, Chr II from 71124-69748, reverse complement, Verified ORF, "Dolichol-P-Man de...	1	1	2.0%	2.47E-4	52861
[View Peptides]	YOR059C	Hypothetical protein	1	1	2.0%	2.52E-4	51106
[View Peptides]	YPR084W	Putative protein of unknown function	1	1	2.0%	2.48E-4	50835
[View Peptides]	PRP46	Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms...	1	1	2.0%	2.51E-4	50700
[View Peptides]	Reverse_YHR004C	NEM1 SGDID:S000001046, Chr VIII from 113089-111749, reverse complement, Verified ORF, "Protein of th...	1	1	2.0%	2.53E-4	50642
[View Peptides]	YMD8	Putative nucleotide sugar transporter, has similarity to Vrg4p	1	1	2.0%	2.56E-4	49615
[View Peptides]	Reverse_YKL046C	DCW1 SGDID:S000001529, Chr XI from 352268-350919, reverse complement, Verified ORF, "Putative mannos...	1	1	2.0%	2.52E-4	49565
[View Peptides]	CEM1	Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis; required for mitoc...	1	1	2.0%	2.56E-4	47640
[View Peptides]	Reverse_YOL052C	SPE2 SGDID:S000005412, Chr XV from 233634-232444, reverse complement, Verified ORF, "S-adenosylmethi...	1	1	2.0%	2.85E-4	46232
[View Peptides]	YHB1	Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role i...	1	1	2.0%	2.84E-4	44646
[View Peptides]	Reverse_YML010W	SPT5 SGDID:S000004470, Chr XIII from 247677-250868, Verified ORF, "Protein that forms a complex with...	1	1	1.9%	1.06E-4	115650
[View Peptides]	YHR131C	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...	1	1	1.9%	1.33E-4	96099
[View Peptides]	NOP14	Nucleolar protein, forms a complex with Noc4p that mediates maturation and nuclear export of 40S rib...	1	1	1.9%	1.4E-4	94302
[View Peptides]	Reverse_YPL180W	TCO89 SGDID:S000006101, Chr XVI from 205247-207646, Verified ORF, "Subunit of TORC1 (Tor1p or Tor2p-...	1	1	1.9%	1.42E-4	88845
[View Peptides]	Reverse_YLL029W	YLL029W SGDID:S000003952, Chr XII from 81460-83709, Uncharacterized ORF, "Hypothetical protein"	1	1	1.9%	1.51E-4	84924
[View Peptides]	SKI7	Coupling protein that mediates interactions between the Ski complex and the cytoplasmic exosome duri...	1	1	1.9%	1.52E-4	84779
[View Peptides]	CLF1	Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms...	1	1	1.9%	1.65E-4	82445
[View Peptides]	YDR444W	Putative protein of unknown function	1	1	1.9%	1.65E-4	78108
[View Peptides]	Reverse_YDR049W	YDR049W SGDID:S000002456, Chr IV from 553251-555149, Uncharacterized ORF, "Hypothetical protein"	1	1	1.9%	1.79E-4	72733
[View Peptides]	Reverse_YNL020C	ARK1 SGDID:S000004965, Chr XIV from 597540-595624, reverse complement, Verified ORF, "Serine/threoni...	1	1	1.9%	1.77E-4	71373
[View Peptides]	MNT4	Putative alpha-1,3-mannosyltransferase, not required for protein O-glycosylation	1	1	1.9%	1.95E-4	68082
[View Peptides]	TRM1	tRNA methyltransferase; two forms of the protein are made by alternative translation starts; localiz...	1	1	1.9%	1.99E-4	64052
[View Peptides]	Reverse_YFR006W	YFR006W SGDID:S000001902, Chr VI from 156139-157746, Uncharacterized ORF, "Hypothetical protein"	1	1	1.9%	2.11E-4	61754
[View Peptides]	YBR184W	Putative protein of unknown function; YBR184W is not an essential gene	1	1	1.9%	2.17E-4	60643
[View Peptides]	AGE1	ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector, involved in the secretory an...	1	1	1.9%	2.35E-4	54494
[View Peptides]	Reverse_YDR190C	RVB1 SGDID:S000002598, Chr IV from 841990-840599, reverse complement, Verified ORF, "Essential prote...	1	1	1.9%	2.44E-4	50453
[View Peptides]	ATG19	Receptor protein specific for the cytoplasm-to-vacuole targeting (Cvt) pathway; delivers cargo prote...	1	1	1.9%	2.73E-4	47599
[View Peptides]	MND2	Subunit of the anaphase-promoting complex (APC); necessary for maintaining sister chromatid cohesion...	1	1	1.9%	3.08E-4	42826
[View Peptides]	Reverse_YPR191W	QCR2 SGDID:S000006395, Chr XVI from 919377-920483, Verified ORF, "Subunit 2 of the ubiquinol cytochr...	1	1	1.9%	3.07E-4	40478
[View Peptides]	MIS1	Mitochondrial C1-tetrahydrofolate synthase, involved in interconversion between different oxidation ...	1	1	1.8%	1.16E-4	106217
[View Peptides]	Reverse_YLL026W	HSP104 SGDID:S000003949, Chr XII from 88622-91348, Verified ORF, "Heat shock protein that cooperates...	1	2	1.8%	2.49E-4	102035
[View Peptides]	NSP1	Essential component of the nuclear pore complex, which mediates nuclear import and export, found in ...	1	2	1.8%	2.75E-4	86516
[View Peptides]	ABF1	DNA binding protein with possible chromatin-reorganizing activity involved in transcriptional activa...	1	1	1.8%	1.55E-4	81752
[View Peptides]	NOP4	Nucleolar protein, essential for processing and maturation of 27S pre-rRNA and large ribosomal subun...	1	1	1.8%	1.65E-4	77825
[View Peptides]	Reverse_YLR369W	SSQ1 SGDID:S000004361, Chr XII from 859551-861524, Verified ORF, "Mitochondrial hsp70-type molecular...	1	1	1.8%	1.72E-4	72365
[View Peptides]	Reverse_YAR007C	RFA1 SGDID:S000000065, Chr I from 158621-156756, reverse complement, Verified ORF, "Subunit of heter...	1	1	1.8%	1.82E-4	70348
[View Peptides]	Reverse_YOR023C	AHC1 SGDID:S000005549, Chr XV from 377711-376011, reverse complement, Verified ORF, "Subunit of the ...	1	1	1.8%	2.0E-4	63869
[View Peptides]	Reverse_YGR276C	RNH70 SGDID:S000003508, Chr VII from 1045486-1043825, reverse complement, Verified ORF, "3' exoribon...	1	1	1.8%	2.04E-4	62849
[View Peptides]	Reverse_YPL228W	CET1 SGDID:S000006149, Chr XVI from 118382-120031, Verified ORF, "Beta (RNA 5'-triphosphatase) subun...	1	1	1.8%	2.06E-4	61850
[View Peptides]	SRP54	Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence...	1	2	1.8%	4.19E-4	59624
[View Peptides]	Reverse_YML118W	NGL3 SGDID:S000004587, Chr XIII from 32334-33851, Verified ORF, "Putative endonuclease, has a domain...	1	1	1.8%	2.24E-4	57742
[View Peptides]	Reverse_YNL124W	NAF1 SGDID:S000005068, Chr XIV from 392894-394372, Verified ORF, "Protein required for the assembly ...	1	1	1.8%	2.3E-4	54950
[View Peptides]	Reverse_YBR283C	SSH1 SGDID:S000000487, Chr II from 770411-768939, reverse complement, Verified ORF, "Subunit of the ...	1	1	1.8%	2.31E-4	53312
[View Peptides]	PUB1	Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for s...	1	1	1.8%	2.5E-4	50763
[View Peptides]	TUB1	Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form...	1	1	1.8%	2.53E-4	49800
[View Peptides]	TUB3	Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form...	1	1	1.8%	2.55E-4	49694
[View Peptides]	GPD2	NAD-dependent glycerol 3-phosphate dehydrogenase, homolog of Gpd1p, expression is controlled by an o...	1	1	1.8%	2.57E-4	49422
[View Peptides]	Reverse_YLR303W	MET17 SGDID:S000004294, Chr XII from 732544-733878, Verified ORF, "O-acetyl homoserine-O-acetyl seri...	1	1	1.8%	2.55E-4	48672
[View Peptides]	TIF3	Translation initiation factor eIF-4B, has RNA annealing activity; contains an RNA recognition motif ...	1	1	1.8%	2.6E-4	48522
[View Peptides]	ERR3	Protein of unknown function, has similarity to enolases	1	1	1.8%	2.59E-4	47313
[View Peptides]	ERR1, ERR2	Protein of unknown function, has similarity to enolases, Protein of unknown function, has similarity...	1	1	1.8%	2.59E-4	47328
[View Peptides]	TAF1	TFIID subunit (145 kDa), involved in RNA polymerase II transcription initiation; possesses in vitro ...	1	1	1.7%	1.06E-4	120696
[View Peptides]	Reverse_YNL132W	KRE33 SGDID:S000005076, Chr XIV from 375323-378493, Verified ORF, "Essential protein of unknown func...	1	1	1.7%	1.07E-4	119347
[View Peptides]	Reverse_YLR240W	VPS34 SGDID:S000004230, Chr XII from 617535-620162, Verified ORF, "Phosphatidylinositol 3-kinase res...	1	1	1.7%	1.29E-4	100921
[View Peptides]	KAP95	Karyopherin beta, forms a complex with Srp1p/Kap60p; interacts with nucleoporins to mediate nuclear ...	1	1	1.7%	1.32E-4	94776
[View Peptides]	Reverse_YER171W	RAD3 SGDID:S000000973, Chr V from 527077-529413, Verified ORF, "5' to 3' DNA helicase, involved in n...	1	1	1.7%	1.45E-4	89786
[View Peptides]	Reverse_YOR165W	SEY1 SGDID:S000005691, Chr XV from 644566-646896, Verified ORF, "Protein of unknown function, contai...	1	1	1.7%	1.46E-4	89432
[View Peptides]	MAK5	Essential nucleolar protein, putative DEAD-box RNA helicase required for maintenance of M1 dsRNA vir...	1	1	1.7%	1.47E-4	87048
[View Peptides]	AVL9	Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal wi...	1	1	1.7%	1.48E-4	86426
[View Peptides]	NGG1	Transcriptional regulator involved in glucose repression of Gal4p-regulated genes; component of tran...	1	1	1.7%	1.61E-4	79282
[View Peptides]	Reverse_YOR275C	RIM20 SGDID:S000005801, Chr XV from 841066-839081, reverse complement, Verified ORF, "Protein involv...	1	1	1.7%	1.71E-4	75947
[View Peptides]	Reverse_YGL107C	RMD9 SGDID:S000003075, Chr VII from 306276-304336, reverse complement, Verified ORF, "Mitochondrial ...	1	1	1.7%	1.75E-4	74596
[View Peptides]	UTP5	Subunit of U3-containing Small Subunit (SSU) processome complex involved in production of 18S rRNA a...	1	1	1.7%	1.76E-4	72002
[View Peptides]	SAC6	Fimbrin, actin-bundling protein; cooperates with Scp1p (calponin/transgelin) in the organization and...	1	2	1.7%	3.53E-4	71773
[View Peptides]	BZZ1	SH3 domain protein implicated in the regulation of actin polymerization, able to recruit actin polym...	1	1	1.7%	1.79E-4	71171
[View Peptides]	Reverse_YGL023C	PIB2 SGDID:S000002991, Chr VII from 452109-450202, reverse complement, Verified ORF, "Protein bindin...	1	1	1.7%	1.78E-4	70617
[View Peptides]	Reverse_YHL019C	APM2 SGDID:S000001011, Chr VIII from 69545-67728, reverse complement, Verified ORF, "Protein of unkn...	1	1	1.7%	1.87E-4	69990
[View Peptides]	NOP7	Component of several different pre-ribosomal particles; forms a complex with Ytm1p and Erb1p that is...	1	1	1.7%	1.87E-4	69877
[View Peptides]	Reverse_YGR065C	VHT1 SGDID:S000003297, Chr VII from 619862-618081, reverse complement, Verified ORF, "High-affinity ...	1	1	1.7%	1.91E-4	69083
[View Peptides]	Reverse_YCR014C	POL4 SGDID:S000000607, Chr III from 140930-139182, reverse complement, Verified ORF, "DNA polymerase...	1	1	1.7%	1.94E-4	67527
[View Peptides]	ADE17	Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4-carboxamide ribonucleotid...	1	1	1.7%	1.91E-4	65263
[View Peptides]	ADE16	Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4-carboxamide ribonucleotid...	1	1	1.7%	1.92E-4	65283
[View Peptides]	Reverse_YDR497C	ITR1 SGDID:S000002905, Chr IV from 1445457-1443703, reverse complement, Verified ORF, "Myo-inositol ...	1	1	1.7%	1.94E-4	63570
[View Peptides]	Reverse_YIL085C	KTR7 SGDID:S000001347, Chr IX from 202040-200487, reverse complement, Verified ORF, "Putative mannos...	1	1	1.7%	2.19E-4	61438
[View Peptides]	CCT4	Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of...	1	1	1.7%	2.15E-4	57604
[View Peptides]	KTR4	Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltran...	1	1	1.7%	2.44E-4	54556
[View Peptides]	SRM1	Nucleotide exchange factor for Gsp1p, localizes to the nucleus, required for nucleocytoplasmic traff...	1	1	1.7%	2.35E-4	53014
[View Peptides]	Reverse_YCL025C	AGP1 SGDID:S000000530, Chr III from 77918-76131, reverse complement, Verified ORF, "Low-affinity ami...	1	1	1.7%	1.9E-4	64866
[View Peptides]	Reverse_YDR046C	BAP3 SGDID:S000002453, Chr IV from 550573-548759, reverse complement, Verified ORF, "Amino acid perm...	1	1	1.7%	1.87E-4	67365
[View Peptides]	Reverse_YLR189C	ATG26 SGDID:S000004179, Chr XII from 534395-530799, reverse complement, Verified ORF, "UDP-glucose:s...	1	1	1.6%	9.45E-5	136054
[View Peptides]	YKL105C	Putative protein of unknown function	1	1	1.6%	1.0E-4	125593
[View Peptides]	Reverse_YDR038C	ENA5 SGDID:S000002445, Chr IV from 530693-527418, reverse complement, Verified ORF, "Protein with si...	1	1	1.6%	1.04E-4	120296
[View Peptides]	Reverse_YDR039C	ENA2 SGDID:S000002446, Chr IV from 534578-531303, reverse complement, Verified ORF, "P-type ATPase s...	1	1	1.6%	1.04E-4	120317
[View Peptides]	Reverse_YDR040C	ENA1 SGDID:S000002447, Chr IV from 538463-535188, reverse complement, Verified ORF, "P-type ATPase s...	1	1	1.6%	1.04E-4	120357
[View Peptides]	MSH1	DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA, has ATPase activity...	1	1	1.6%	1.18E-4	109408
[View Peptides]	YMR086W	Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ...	1	1	1.6%	1.18E-4	105874
[View Peptides]	Reverse_YGR150C	YGR150C SGDID:S000003382, Chr VII from 793058-790464, reverse complement, Uncharacterized ORF, "Hypo...	1	1	1.6%	1.31E-4	101422
[View Peptides]	ARP8	Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en...	1	1	1.6%	1.29E-4	100209
[View Peptides]	IRC5	Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increase...	1	1	1.6%	1.33E-4	96965
[View Peptides]	Reverse_YFL050C	ALR2 SGDID:S000001844, Chr VI from 35848-33272, reverse complement, Verified ORF, "Probable Mg(2+) t...	1	1	1.6%	1.32E-4	96684
[View Peptides]	RFC1	Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase t...	1	1	1.6%	1.32E-4	94903
[View Peptides]	RIX7	Putative ATPase of the AAA family, required for export of pre-ribosomal large subunits from the nucl...	1	1	1.6%	1.35E-4	93069
[View Peptides]	Reverse_YDR258C	HSP78 SGDID:S000002666, Chr IV from 974237-971802, reverse complement, Verified ORF, "Oligomeric mit...	1	1	1.6%	1.39E-4	91336
[View Peptides]	Reverse_YPL240C	HSP82 SGDID:S000006161, Chr XVI from 98625-96496, reverse complement, Verified ORF, "Cytoplasmic cha...	1	1	1.6%	1.6E-4	81406
[View Peptides]	Reverse_YMR186W	HSC82 SGDID:S000004798, Chr XIII from 632354-634471, Verified ORF, "Cytoplasmic chaperone of the Hsp...	1	1	1.6%	1.6E-4	80900
[View Peptides]	EXO1	5'-3' exonuclease and flap-endonuclease involved in recombination, double-strand break repair and DN...	1	1	1.6%	1.61E-4	80162
[View Peptides]	YEL1	Guanine nucleotide exchange factor specific for Arf3p; localized to the bud neck and tip; required f...	1	1	1.6%	1.65E-4	78768
[View Peptides]	PUS7	Pseudouridine synthase, catalyzes pseudouridylation at position 35 in U2 snRNA, position 50 in 5S rR...	1	1	1.6%	1.68E-4	77002
[View Peptides]	YPK1	Serine/threonine protein kinase that phosphorylates and downregulates flippase activator Fpk1p; muta...	1	1	1.6%	1.67E-4	76480
[View Peptides]	KAR2	ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i...	1	1	1.6%	1.66E-4	74468
[View Peptides]	Reverse_YER088C	DOT6 SGDID:S000000890, Chr V from 335184-333172, reverse complement, Verified ORF, "Protein of unkno...	1	1	1.6%	1.69E-4	73048
[View Peptides]	BDF2	Protein involved in transcription initiation at TATA-containing promoters; associates with the basal...	1	1	1.6%	1.78E-4	72513
[View Peptides]	FUI1	High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant ...	1	1	1.6%	1.77E-4	72165
[View Peptides]	Reverse_YDL013W	HEX3 SGDID:S000002171, Chr IV from 429064-430923, Verified ORF, "Ring finger protein involved in the...	1	1	1.6%	1.83E-4	71071
[View Peptides]	Reverse_YBR068C	BAP2 SGDID:S000000272, Chr II from 375687-373858, reverse complement, Verified ORF, "High-affinity l...	1	1	1.6%	1.86E-4	67670
[View Peptides]	Reverse_YBR069C	TAT1 SGDID:S000000273, Chr II from 378430-376571, reverse complement, Verified ORF, "Amino acid tran...	1	1	1.6%	1.83E-4	68758
[View Peptides]	NPL4	Endoplasmic reticulum and nuclear membrane protein, forms a complex with Cdc48p and Ufd1p that recog...	1	1	1.6%	1.95E-4	65782
[View Peptides]	Reverse_YPR145W	ASN1 SGDID:S000006349, Chr XVI from 822616-824334, Verified ORF, "Asparagine synthetase, isozyme of ...	1	1	1.6%	1.98E-4	64470
[View Peptides]	Reverse_YGR124W	ASN2 SGDID:S000003356, Chr VII from 739949-741667, Verified ORF, "Asparagine synthetase, isozyme of ...	1	1	1.6%	1.98E-4	64593
[View Peptides]	ASN1	Asparagine synthetase, isozyme of Asn2p; catalyzes the synthesis of L-asparagine from L-aspartate in...	1	1	1.6%	1.98E-4	64470
[View Peptides]	Reverse_YHR037W	PUT2 SGDID:S000001079, Chr VIII from 181970-183697, Verified ORF, "Delta-1-pyrroline-5-carboxylate d...	1	1	1.6%	1.97E-4	64435
[View Peptides]	YLL058W	Putative protein of unknown function with similarity to Str2p, which is a cystathionine gamma-syntha...	1	1	1.6%	1.97E-4	64223
[View Peptides]	NDE1	Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase that catalyzes t...	1	1	1.6%	2.02E-4	62774
[View Peptides]	UTP7	Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ...	1	1	1.6%	2.04E-4	62317
[View Peptides]	Reverse_YNL241C	ZWF1 SGDID:S000005185, Chr XIV from 197944-196427, reverse complement, Verified ORF, "Glucose-6-phos...	1	1	1.6%	2.24E-4	57522
[View Peptides]	FRS2	Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs1p to form activ...	1	1	1.6%	2.25E-4	57511
[View Peptides]	TPS1	Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storag...	1	1	1.6%	2.29E-4	56148
[View Peptides]	Reverse_YDR508C	GNP1 SGDID:S000002916, Chr IV from 1468434-1466443, reverse complement, Verified ORF, "High-affinity...	1	1	1.5%	1.71E-4	73598
[View Peptides]	TRM3	2'-O-ribose methyltransferase, catalyzes the ribose methylation of the guanosine nucleotide at posit...	1	1	1.5%	7.89E-5	165047
[View Peptides]	ECM21	Protein involved in regulating the endocytosis of plasma membrane proteins; identified as a substrat...	1	1	1.5%	1.01E-4	123609
[View Peptides]	OAF3	Zinc cluster protein; regulates transcription in response to oleate levels; the authentic, non-tagge...	1	1	1.5%	1.31E-4	101825
[View Peptides]	PXA2	Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p), requi...	1	1	1.5%	1.33E-4	97126
[View Peptides]	RAD4	Protein that recognizes and binds damaged DNA (with Rad23p) during nucleotide excision repair; subun...	1	1	1.5%	1.5E-4	87204
[View Peptides]	Reverse_YOR080W	DIA2 SGDID:S000005606, Chr XV from 474553-476793, Verified ORF, "Protein of unknown function, involv...	1	1	1.5%	1.52E-4	86801
[View Peptides]	Reverse_YBL067C	UBP13 SGDID:S000000163, Chr II from 95884-93641, reverse complement, Verified ORF, "Putative ubiquit...	1	1	1.5%	1.51E-4	83865
[View Peptides]	SMY2	Protein of unknown function involved in COPII vesicle formation; interacts with the Sec23p/Sec24p su...	1	1	1.5%	1.53E-4	81397
[View Peptides]	Reverse_YLR083C	EMP70 SGDID:S000004073, Chr XII from 296095-294092, reverse complement, Verified ORF, "Protein whose...	1	1	1.5%	1.7E-4	75963
[View Peptides]	Reverse_YKL079W	SMY1 SGDID:S000001562, Chr XI from 286247-288217, Verified ORF, "Protein that interacts with Myo2p, ...	1	1	1.5%	1.72E-4	73799
[View Peptides]	DUS3	Dihydrouridine synthase, member of a widespread family of conserved proteins including Smm1p, Dus1p,...	1	1	1.5%	1.86E-4	69817
[View Peptides]	Reverse_YCR023C	YCR023C SGDID:S000000617, Chr III from 160368-158533, reverse complement, Uncharacterized ORF, "Hypo...	1	1	1.5%	1.85E-4	69218
[View Peptides]	MET13	Major isozyme of methylenetetrahydrofolate reductase, catalyzes the reduction of 5,10-methylenetetra...	1	1	1.5%	1.89E-4	68560
[View Peptides]	Reverse_YCR088W	ABP1 SGDID:S000000684, Chr III from 265064-266842, Verified ORF, "Actin-binding protein of the corti...	1	1	1.5%	1.91E-4	65576
[View Peptides]	PHO84	High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated...	1	1	1.5%	1.93E-4	64382
[View Peptides]	DAK1	Dihydroxyacetone kinase, required for detoxification of dihydroxyacetone (DHA); involved in stress a...	1	1	1.5%	1.94E-4	62207
[View Peptides]	YOS9	ER quality-control lectin; integral subunit of the HRD ligase; binds to glycans with terminal alpha-...	1	1	1.5%	2.09E-4	61258
[View Peptides]	YFL040W	Putative transporter, member of the sugar porter family; YFL040W is not an essential gene	1	1	1.5%	2.1E-4	60610
[View Peptides]	Reverse_YDL038C	YDL038C SGDID:S000002196, Chr IV from 384078-382327, reverse complement, Uncharacterized ORF, "Hypot...	1	1	1.5%	1.94E-4	58523
[View Peptides]	SWC4	Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone...	1	1	1.5%	2.38E-4	55213
[View Peptides]	Reverse_YHR120W	MSH1 SGDID:S000001162, Chr VIII from 349577-352456, Verified ORF, "DNA-binding protein of the mitoch...	1	1	1.4%	1.18E-4	109408
[View Peptides]	Reverse_YNL243W	SLA2 SGDID:S000005187, Chr XIV from 188052-190958, Verified ORF, "Transmembrane actin-binding protei...	1	1	1.4%	1.17E-4	108996
[View Peptides]	SLA2	Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization...	1	1	1.4%	1.17E-4	108996
[View Peptides]	PFK2	Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaero...	1	1	1.4%	1.18E-4	104618
[View Peptides]	ALY1	Protein proposed to regulate the endocytosis of plasma membrane proteins by recruiting the ubiquitin...	1	1	1.4%	1.24E-4	102540
[View Peptides]	ADE3	Cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase, involved in single carbon metabolism ...	1	1	1.4%	1.2E-4	102205
[View Peptides]	Reverse_YLR166C	SEC10 SGDID:S000004156, Chr XII from 498046-495431, reverse complement, Verified ORF, "Essential 100...	1	1	1.4%	1.3E-4	100342
[View Peptides]	VAC14	Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some protei...	1	1	1.4%	1.29E-4	99773
[View Peptides]	FZO1	Mitofusin, mitochondrial integral membrane protein involved in mitochondrial fusion and mitochondria...	1	1	1.4%	1.32E-4	97808
[View Peptides]	SIP1	Alternate beta-subunit of the Snf1p kinase complex, may confer substrate specificity; vacuolar prote...	1	1	1.4%	1.31E-4	96259
[View Peptides]	PRY3	Protein of unknown function	1	1	1.4%	1.29E-4	89152
[View Peptides]	Reverse_YNL186W	UBP10 SGDID:S000005130, Chr XIV from 289500-291878, Verified ORF, "Ubiquitin-specific protease that ...	1	1	1.4%	1.43E-4	88517
[View Peptides]	Reverse_YLR266C	PDR8 SGDID:S000004256, Chr XII from 677726-675621, reverse complement, Verified ORF, "Transcription ...	1	1	1.4%	1.61E-4	81274
[View Peptides]	HMI1	Mitochondrial inner membrane localized ATP-dependent DNA helicase, required for the maintenance of t...	1	1	1.4%	1.6E-4	80576
[View Peptides]	SGF73	Subunit of SAGA histone acetyltransferase complex; involved in formation of the preinitiation comple...	1	1	1.4%	1.72E-4	72878
[View Peptides]	UBA2	Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugatio...	1	1	1.4%	1.78E-4	71259
[View Peptides]	Reverse_YMR227C	TAF7 SGDID:S000004840, Chr XIII from 724384-722612, reverse complement, Verified ORF, "TFIID subunit...	1	1	1.4%	1.92E-4	67556
[View Peptides]	Reverse_YPR137W	RRP9 SGDID:S000006341, Chr XVI from 802355-804076, Verified ORF, "Protein involved in pre-rRNA proce...	1	1	1.4%	1.97E-4	65054
[View Peptides]	Reverse_YBL034C	STU1 SGDID:S000000130, Chr II from 158392-153851, reverse complement, Verified ORF, "Component of th...	1	1	1.3%	7.48E-5	174176
[View Peptides]	SNT2	DNA binding protein with similarity to the S. pombe Snt2 protein; computational analysis suggests a ...	1	1	1.3%	8.07E-5	163203
[View Peptides]	ADR1	Carbon source-responsive zinc-finger transcription factor, required for transcription of the glucose...	1	1	1.3%	8.56E-5	150941
[View Peptides]	ECM32	DNA dependent ATPase/DNA helicase belonging to the Dna2p- and Nam7p-like family of helicases that is...	1	1	1.3%	1.01E-4	126970
[View Peptides]	YNR065C	Protein of unknown function; protein-protein interactions suggest a possible role in actin patch for...	1	1	1.3%	1.01E-4	125200
[View Peptides]	HOS4	Subunit of the Set3 complex, which is a meiotic-specific repressor of sporulation specific genes tha...	1	1	1.3%	1.05E-4	123556
[View Peptides]	VAM6	Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by fa...	1	1	1.3%	1.08E-4	122881
[View Peptides]	Reverse_YER075C	PTP3 SGDID:S000000877, Chr V from 311195-308409, reverse complement, Verified ORF, "Phosphotyrosine-...	1	1	1.3%	1.22E-4	105251
[View Peptides]	PTP3	Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote...	1	1	1.3%	1.22E-4	105251
[View Peptides]	Reverse_YHR098C	SFB3 SGDID:S000001140, Chr VIII from 301937-299148, reverse complement, Verified ORF, "Member of the...	1	1	1.3%	1.22E-4	103950
[View Peptides]	TPS2	Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the...	1	1	1.3%	1.26E-4	102976
[View Peptides]	Reverse_YNR013C	PHO91 SGDID:S000005296, Chr XIV from 651714-649030, reverse complement, Verified ORF, "Low-affinity ...	1	1	1.3%	1.27E-4	99490
[View Peptides]	Reverse_YJL047C	RTT101 SGDID:S000003583, Chr X from 352024-349496, reverse complement, Verified ORF, "Cullin subunit...	1	1	1.3%	1.34E-4	99326
[View Peptides]	RTT101	Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex with a role in anaphase progression;...	1	1	1.3%	1.35E-4	99326
[View Peptides]	YLR057W	Putative protein of unknown function; YLR050C is not an essential gene	1	2	1.3%	2.67E-4	96997
[View Peptides]	Reverse_YOL155C	YOL155C SGDID:S000005515, Chr XV from 31605-28702, reverse complement, Uncharacterized ORF, "ORF"	1	1	1.3%	1.17E-4	94706
[View Peptides]	YTA12	Component, with Afg3p, of the mitochondrial inner membrane m-AAA protease that mediates degradation ...	1	1	1.3%	1.37E-4	93276
[View Peptides]	Reverse_YDL239C	ADY3 SGDID:S000002398, Chr IV from 28775-26403, reverse complement, Verified ORF, "Protein required ...	1	1	1.3%	1.43E-4	91740
[View Peptides]	EFR3	Non-essential protein of unknown function; exhibits synthetic lethal genetic interactions with PHO85...	1	1	1.3%	1.45E-4	89190
[View Peptides]	HCA4	Putative nucleolar DEAD box RNA helicase; high-copy number suppression of a U14 snoRNA processing mu...	1	1	1.3%	1.47E-4	87193
[View Peptides]	EMC1	Member of a transmembrane complex required for efficient folding of proteins in the ER; null mutant ...	1	1	1.3%	1.49E-4	87181
[View Peptides]	Reverse_YBR142W	MAK5 SGDID:S000000346, Chr II from 528311-530632, Verified ORF, "Essential nucleolar protein, putati...	1	1	1.3%	1.46E-4	87048
[View Peptides]	PKH1	Serine/threonine protein kinase involved in sphingolipid-mediated signaling pathway that controls en...	1	1	1.3%	1.48E-4	86253
[View Peptides]	GPT2	Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase located...	1	1	1.3%	1.52E-4	83645
[View Peptides]	GLC3	Glycogen branching enzyme, involved in glycogen accumulation; green fluorescent protein (GFP)-fusion...	1	1	1.3%	1.61E-4	81116
[View Peptides]	Reverse_YHR074W	QNS1 SGDID:S000001116, Chr VIII from 246195-248339, Verified ORF, "Glutamine-dependent NAD(+) synthe...	1	1	1.3%	1.58E-4	80686
[View Peptides]	GSG1	Subunit of TRAPP (transport protein particle), a multi-subunit complex involved in targeting and/or ...	1	1	1.3%	1.62E-4	80495
[View Peptides]	Reverse_YNL103W	MET4 SGDID:S000005047, Chr XIV from 427737-429755, Verified ORF, "Lecine-zipper transcriptional acti...	1	1	1.3%	1.68E-4	74373
[View Peptides]	SNX41	Sorting nexin, involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the tr...	1	1	1.3%	1.81E-4	70741
[View Peptides]	Reverse_YDL153C	SAS10 SGDID:S000002312, Chr IV from 183019-181187, reverse complement, Verified ORF, "Component of t...	1	1	1.3%	1.85E-4	70260
[View Peptides]	YJL045W	Minor succinate dehydrogenase isozyme; homologous to Sdh1p, the major isozyme reponsible for the oxi...	1	1	1.3%	1.79E-4	69383
[View Peptides]	Reverse_YDR144C	MKC7 SGDID:S000002551, Chr IV from 746096-744306, reverse complement, Verified ORF, "GPI-anchored as...	1	1	1.3%	1.9E-4	64269
[View Peptides]	Reverse_YNL029C	KTR5 SGDID:S000004974, Chr XIV from 578774-577206, reverse complement, Verified ORF, "Putative manno...	1	1	1.3%	2.17E-4	61728
[View Peptides]	Reverse_YDL088C	ASM4 SGDID:S000002246, Chr IV from 300003-298417, reverse complement, Verified ORF, "Nuclear pore co...	1	1	1.3%	2.14E-4	58793
[View Peptides]	SDH1	Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxid...	1	1	1.2%	1.77E-4	70229
[View Peptides]	BUD3	Protein involved in bud-site selection and required for axial budding pattern; localizes with septin...	1	1	1.2%	6.92E-5	184718
[View Peptides]	Reverse_YDR159W	SAC3 SGDID:S000002566, Chr IV from 771872-775777, Verified ORF, "Nuclear pore-associated protein, fo...	1	1	1.2%	8.7E-5	149568
[View Peptides]	PDS5	Protein required for establishment and maintenance of sister chromatid condensation and cohesion, co...	1	1	1.2%	8.87E-5	147041
[View Peptides]	ESL2	Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ...	1	1	1.2%	9.48E-5	137491
[View Peptides]	COP1	Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secr...	1	1	1.2%	9.43E-5	135607
[View Peptides]	Reverse_YPL006W	NCR1 SGDID:S000005927, Chr XVI from 544628-548140, Verified ORF, "Vacuolar membrane protein that tra...	1	1	1.2%	9.67E-5	132645
[View Peptides]	Reverse_YIL031W	ULP2 SGDID:S000001293, Chr IX from 292632-295736, Verified ORF, "Peptidase that deconjugates Smt3/SU...	1	1	1.2%	1.09E-4	116882
[View Peptides]	ATG9	Transmembrane protein involved in forming Cvt and autophagic vesicles; cycles between the phagophore...	1	1	1.2%	1.14E-4	115403
[View Peptides]	Reverse_YIL002C	INP51 SGDID:S000001264, Chr IX from 353428-350588, reverse complement, Verified ORF, "Phosphatidylin...	1	1	1.2%	1.2E-4	108430
[View Peptides]	RSN1	Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cell...	1	1	1.2%	1.19E-4	107672
[View Peptides]	APL5	Delta adaptin-like subunit of the clathrin associated protein complex (AP-3); functions in transport...	1	1	1.2%	1.22E-4	106924
[View Peptides]	SOV1	Mitochondrial protein of unknown function	1	1	1.2%	1.26E-4	104748
[View Peptides]	RPN2	Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p	1	1	1.2%	1.2E-4	104232
[View Peptides]	Reverse_YKR079C	TRZ1 SGDID:S000001787, Chr XI from 588947-586431, reverse complement, Uncharacterized ORF, "tRNase Z...	1	1	1.2%	1.35E-4	96816
[View Peptides]	Reverse_YDL132W	CDC53 SGDID:S000002290, Chr IV from 224304-226751, Verified ORF, "Cullin, structural protein of SCF ...	1	1	1.2%	1.39E-4	93944
[View Peptides]	Reverse_YER144C	UBP5 SGDID:S000000946, Chr V from 460218-457801, reverse complement, Verified ORF, "Putative ubiquit...	1	1	1.2%	1.41E-4	92260
[View Peptides]	RAD53	Protein kinase, required for cell-cycle arrest in response to DNA damage; activated by trans autopho...	1	1	1.2%	1.38E-4	91962
[View Peptides]	MAD1	Coiled-coil protein involved in the spindle-assembly checkpoint; phosphorylated by Mps1p upon checkp...	1	1	1.2%	1.51E-4	87651
[View Peptides]	Reverse_YJL033W	HCA4 SGDID:S000003570, Chr X from 383753-386065, Verified ORF, "Putative nucleolar DEAD box RNA heli...	1	1	1.2%	1.47E-4	87193
[View Peptides]	MLH1	Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis;...	1	1	1.2%	1.47E-4	87062
[View Peptides]	Reverse_YGR245C	SDA1 SGDID:S000003477, Chr VII from 982073-979770, reverse complement, Verified ORF, "Highly conserv...	1	1	1.2%	1.47E-4	86618
[View Peptides]	Reverse_YLR274W	CDC46 SGDID:S000004264, Chr XII from 691557-693884, Verified ORF, "Component of the hexameric MCM co...	1	1	1.2%	1.46E-4	86411
[View Peptides]	Reverse_YPL222W	YPL222W SGDID:S000006143, Chr XVI from 130161-132227, Uncharacterized ORF, "The authentic, non-tagge...	1	1	1.2%	1.64E-4	78313
[View Peptides]	Reverse_YGL113W	SLD3 SGDID:S000003081, Chr VII from 295935-297941, Verified ORF, "Protein involved in the initiation...	1	1	1.2%	1.69E-4	77298
[View Peptides]	CAF4	WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent ...	1	1	1.2%	1.72E-4	74709
[View Peptides]	PIN4	Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contai...	1	1	1.2%	1.7E-4	73776
[View Peptides]	Reverse_YKL088W	YKL088W SGDID:S000001571, Chr XI from 274927-276642, Uncharacterized ORF, "Predicted phosphopantothe...	1	1	1.2%	1.98E-4	65238
[View Peptides]	Reverse_YLR134W	PDC5 SGDID:S000004124, Chr XII from 410724-412415, Verified ORF, "Minor isoform of pyruvate decarbox...	1	1	1.2%	2.01E-4	61912
[View Peptides]	DNF2	Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane; contribute...	1	1	1.1%	7.03E-5	182617
[View Peptides]	PEP1	Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golg...	1	1	1.1%	7.17E-5	177777
[View Peptides]	PDR15	Plasma membrane ATP binding cassette (ABC) transporter, multidrug transporter and general stress res...	1	1	1.1%	7.41E-5	172255
[View Peptides]	YCS4	Subunit of the condensin complex; required for establishment and maintenance of chromosome condensat...	1	1	1.1%	9.63E-5	132967
[View Peptides]	BUD2	GTPase activating factor for Rsr1p/Bud1p required for both axial and bipolar budding patterns; mutan...	1	1	1.1%	1.03E-4	126663
[View Peptides]	CPA2	Large subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulli...	1	1	1.1%	1.01E-4	123915
[View Peptides]	Reverse_YJL084C	YJL084C SGDID:S000003620, Chr X from 277918-274778, reverse complement, Verified ORF, "Cytoplasmic p...	1	1	1.1%	1.08E-4	117216
[View Peptides]	Reverse_YFR030W	MET10 SGDID:S000001926, Chr VI from 213300-216407, Verified ORF, "Subunit alpha of assimilatory sulf...	1	1	1.1%	1.09E-4	114829
[View Peptides]	PIP2	Autoregulatory oleate-specific transcriptional activator of peroxisome proliferation, contains Zn(2)...	1	1	1.1%	1.14E-4	114710
[View Peptides]	CSE1	Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p), homolog of meta...	1	1	1.1%	1.18E-4	109356
[View Peptides]	YJL070C	Putative protein of unknown function with similarity to AMP deaminases; the authentic, non-tagged pr...	1	1	1.1%	1.28E-4	104264
[View Peptides]	Reverse_YMR273C	ZDS1 SGDID:S000004886, Chr XIII from 813979-811232, reverse complement, Verified ORF, "Protein that ...	1	1	1.1%	1.24E-4	103358
[View Peptides]	EPL1	Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex; homologous to Dro...	1	1	1.1%	1.36E-4	96738
[View Peptides]	PET111	Mitochondrial translational activator specific for the COX2 mRNA; located in the mitochondrial inner...	1	1	1.1%	1.42E-4	94523
[View Peptides]	Reverse_YDL056W	MBP1 SGDID:S000002214, Chr IV from 352877-355378, Verified ORF, "Transcription factor involved in re...	1	1	1.1%	1.36E-4	93908
[View Peptides]	Reverse_YBR284W	YBR284W SGDID:S000000488, Chr II from 771235-773628, Uncharacterized ORF, "Hypothetical protein"	1	1	1.1%	1.42E-4	92904
[View Peptides]	GAC1	Regulatory subunit for Glc7p type-1 protein phosphatase (PP1), tethers Glc7p to Gsy2p glycogen synth...	1	1	1.1%	1.43E-4	88533
[View Peptides]	Reverse_YER109C	FLO8 SGDID:S000000911, Chr V from 377610-375211, reverse complement, Verified ORF, "Transcription fa...	1	1	1.1%	1.42E-4	86648
[View Peptides]	NUP85	Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for assembly of the sub...	1	1	1.1%	1.52E-4	84898
[View Peptides]	Reverse_YJL082W	IML2 SGDID:S000003618, Chr X from 281101-283296, Verified ORF, "Protein of unknown function, green f...	1	1	1.1%	1.55E-4	82536
[View Peptides]	Reverse_YDL214C	PRR2 SGDID:S000002373, Chr IV from 76546-74447, reverse complement, Verified ORF, "Protein kinase wi...	1	1	1.1%	1.62E-4	78939
[View Peptides]	MSN2	Transcriptional activator related to Msn4p; activated in stress conditions, which results in translo...	1	1	1.1%	1.61E-4	77861
[View Peptides]	YAP1801	Protein involved in clathrin cage assembly; binds Pan1p and clathrin; homologous to Yap1802p, member...	1	1	1.1%	1.78E-4	71660
[View Peptides]	TAT1	Amino acid transport protein for valine, leucine, isoleucine, and tyrosine, low-affinity tryptophan ...	1	1	1.1%	1.83E-4	68758
[View Peptides]	Reverse_YJR138W	IML1 SGDID:S000003899, Chr X from 684482-689236, Verified ORF, "Protein of unknown function, green f...	1	1	1.0%	7.15E-5	181948
[View Peptides]	YTA7	Protein that localizes to chromatin and has a role in regulation of histone gene expression; has a b...	1	1	1.0%	8.21E-5	157406
[View Peptides]	TCB1	Lipid-binding protein containing three calcium and lipid binding domains; non-tagged protein localiz...	1	1	1.0%	9.55E-5	133576
[View Peptides]	Reverse_YLR272C	YCS4 SGDID:S000004262, Chr XII from 687204-683674, reverse complement, Verified ORF, "Non-SMC subuni...	1	1	1.0%	9.62E-5	132967
[View Peptides]	Reverse_YJR090C	GRR1 SGDID:S000003850, Chr X from 594241-590786, reverse complement, Verified ORF, "F-box protein co...	1	1	1.0%	9.83E-5	132734
[View Peptides]	Reverse_YHR077C	NMD2 SGDID:S000001119, Chr VIII from 255758-255753,255639-252376, reverse complement, Verified ORF, ...	1	1	1.0%	1.04E-4	126747
[View Peptides]	CSR2	Nuclear protein proposed to regulate utilization of nonfermentable carbon sources and endocytosis of...	1	1	1.0%	1.01E-4	124848
[View Peptides]	DSE4	Daughter cell-specific secreted protein with similarity to glucanases, degrades cell wall from the d...	1	1	1.0%	1.01E-4	121064
[View Peptides]	Reverse_YFL034W	YFL034W SGDID:S000001860, Chr VI from 65475-68696, Uncharacterized ORF, "Possible integral membrane ...	1	1	1.0%	1.05E-4	119496
[View Peptides]	DAN4	Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic ...	1	1	1.0%	9.76E-5	118359
[View Peptides]	SUM1	Transcriptional repressor required for mitotic repression of middle sporulation-specific genes; also...	1	1	1.0%	1.07E-4	118201
[View Peptides]	MET18	DNA repair and TFIIH regulator, required for both nucleotide excision repair (NER) and RNA polymeras...	1	1	1.0%	1.1E-4	117882
[View Peptides]	RAD2	Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair to e...	1	1	1.0%	1.1E-4	117838
[View Peptides]	Reverse_YLR389C	STE23 SGDID:S000004381, Chr XII from 902660-899577, reverse complement, Verified ORF, "Metalloprotea...	1	1	1.0%	1.1E-4	117579
[View Peptides]	ULP2	Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins, plays a role in chromosome cohesion ...	1	1	1.0%	1.1E-4	116882
[View Peptides]	MAK21	Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis; i...	1	1	1.0%	1.11E-4	116676
[View Peptides]	Reverse_YOR048C	RAT1 SGDID:S000005574, Chr XV from 421650-418630, reverse complement, Verified ORF, "Nuclear 5' to 3...	1	1	1.0%	1.12E-4	115934
[View Peptides]	Reverse_YFR040W	SAP155 SGDID:S000001936, Chr VI from 234229-237237, Verified ORF, "Protein that forms a complex with...	1	1	1.0%	1.13E-4	114989
[View Peptides]	RGA2	GTPase-activating protein for the polarity-establishment protein Cdc42p; implicated in control of se...	1	1	1.0%	1.12E-4	113291
[View Peptides]	DBP10	Putative ATP-dependent RNA helicase of the DEAD-box protein family, constituent of 66S pre-ribosomal...	1	1	1.0%	1.14E-4	113158
[View Peptides]	Reverse_YDL035C	GPR1 SGDID:S000002193, Chr IV from 392054-389169, reverse complement, Verified ORF, "Plasma membrane...	1	1	1.0%	1.18E-4	110709
[View Peptides]	RPN1	Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome; may participate in the...	1	1	1.0%	1.14E-4	109492
[View Peptides]	Reverse_YBR055C	PRP6 SGDID:S000000259, Chr II from 347299-344600, reverse complement, Verified ORF, "Splicing factor...	1	1	1.0%	1.26E-4	104229
[View Peptides]	ZDS1	Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencin...	1	1	1.0%	1.24E-4	103358
[View Peptides]	LHS1	Molecular chaperone of the endoplasmic reticulum lumen, involved in polypeptide translocation and fo...	1	1	1.0%	1.29E-4	99572
[View Peptides]	Reverse_YML029W	USA1 SGDID:S000004491, Chr XIII from 217362-219878, Verified ORF, "Protein that interacts in the two...	1	1	1.0%	1.35E-4	96653
[View Peptides]	Reverse_YMR089C	YTA12 SGDID:S000004695, Chr XIII from 448085-445608, reverse complement, Verified ORF, "Component, w...	1	1	1.0%	1.37E-4	93276
[View Peptides]	Reverse_YLR176C	RFX1 SGDID:S000004166, Chr XII from 510234-507799, reverse complement, Verified ORF, "Protein involv...	1	1	1.0%	1.39E-4	90584
[View Peptides]	Reverse_YFL009W	CDC4 SGDID:S000001885, Chr VI from 116139-118478, Verified ORF, "F-box protein required for G1/S and...	1	1	1.0%	1.45E-4	86090
[View Peptides]	Reverse_YNL183C	NPR1 SGDID:S000005127, Chr XIV from 295511-293139, reverse complement, Verified ORF, "Protein kinase...	1	1	1.0%	1.43E-4	85990
[View Peptides]	RGD2	GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p	1	1	1.0%	1.59E-4	82208
[View Peptides]	Reverse_YDR172W	SUP35 SGDID:S000002579, Chr IV from 808319-810376, Verified ORF, "Translation termination factor eRF...	1	1	1.0%	1.65E-4	76551
[View Peptides]	Reverse_YHL009W-B	YHL009W-B SGDID:S000007372, Chr VIII from 85905-86990,86992-91314, transposable_element_gene, "TyB G...	1	1	0.9%	6.28E-5	207969
[View Peptides]	Reverse_YJL113W	YJL113W SGDID:S000003649, Chr X from 197834-198919,198921-203246, transposable_element_gene, "TyB Ga...	1	1	0.9%	6.28E-5	207708
[View Peptides]	ARO1	Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which i...	1	1	0.9%	7.13E-5	174754
[View Peptides]	Reverse_YDL112W	TRM3 SGDID:S000002270, Chr IV from 258915-263225, Verified ORF, "2'-O-ribose methyltransferase, cata...	1	1	0.9%	7.88E-5	165047
[View Peptides]	TAF2	TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation	1	1	0.9%	8.05E-5	161470
[View Peptides]	Reverse_YBR115C	LYS2 SGDID:S000000319, Chr II from 473920-469742, reverse complement, Verified ORF, "Alpha aminoadip...	1	1	0.9%	8.13E-5	155345
[View Peptides]	Reverse_YHR155W	YSP1 SGDID:S000001198, Chr VIII from 407106-410792, Uncharacterized ORF, "Mitochondrial protein with...	1	1	0.9%	9.22E-5	143583
[View Peptides]	OXP1	5-oxoprolinase; enzyme is ATP-dependent and functions as a dimer; similar to mouse Oplah gene; green...	1	1	0.9%	8.81E-5	140427
[View Peptides]	YGL140C	Putative protein of unknown function; non-essential gene; contains multiple predicted transmembrane ...	1	1	0.9%	9.29E-5	137476
[View Peptides]	MYO5	One of two type I myosins; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletio...	1	1	0.9%	9.29E-5	136899
[View Peptides]	SCP160	Essential RNA-binding G protein effector of mating response pathway, mainly associated with nuclear ...	1	1	0.9%	9.27E-5	134809
[View Peptides]	BRE4	Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented ...	1	1	0.9%	1.01E-4	129725
[View Peptides]	Reverse_YDL185W	TFP1 SGDID:S000002344, Chr IV from 126788-130003, Verified ORF, "Vacuolar ATPase V1 domain subunit A...	1	1	0.9%	1.06E-4	118637
[View Peptides]	Reverse_YKL197C	PEX1 SGDID:S000001680, Chr XI from 73870-70739, reverse complement, Verified ORF, "AAA-family ATPase...	1	1	0.9%	1.08E-4	117276
[View Peptides]	SPT5	Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl...	1	1	0.9%	1.07E-4	115650
[View Peptides]	RPG1	eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati...	1	2	0.9%	2.35E-4	110344
[View Peptides]	Reverse_YMR205C	PFK2 SGDID:S000004818, Chr XIII from 674765-671886, reverse complement, Verified ORF, "Beta subunit ...	1	1	0.9%	1.18E-4	104618
[View Peptides]	SEC24	Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, required for cargo selection d...	1	1	0.9%	1.22E-4	103635
[View Peptides]	CYK3	SH3-domain protein located in the mother-bud neck and the cytokinetic actin ring; mutant phenotype a...	1	1	0.9%	1.28E-4	100621
[View Peptides]	YHR182W	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...	1	1	0.9%	1.44E-4	90109
[View Peptides]	PMT4	Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote...	1	1	0.9%	1.49E-4	87966
[View Peptides]	Reverse_YJL090C	DPB11 SGDID:S000003626, Chr X from 264967-262673, reverse complement, Verified ORF, "Essential BRCT ...	1	1	0.9%	1.48E-4	87241
[View Peptides]	MCM5	Component of the hexameric MCM complex, which is important for priming origins of DNA replication in...	1	1	0.9%	1.46E-4	86411
[View Peptides]	VMR1	Protein of unknown function that may interact with ribosomes, based on co-purification experiments; ...	1	1	0.8%	7.11E-5	180925
[View Peptides]	Reverse_YER166W	DNF1 SGDID:S000000968, Chr V from 512739-517454, Verified ORF, "Non-essential P-type ATPase that is ...	1	1	0.8%	7.21E-5	177797
[View Peptides]	HAP1	Zinc finger transcription factor involved in the complex regulation of gene expression in response t...	1	1	0.8%	7.54E-5	166107
[View Peptides]	LYS2	Alpha aminoadipate reductase, catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-...	1	1	0.8%	8.14E-5	155345
[View Peptides]	Reverse_YBL047C	EDE1 SGDID:S000000143, Chr II from 132043-127898, reverse complement, Verified ORF, "Key endocytic p...	1	1	0.8%	8.2E-5	150783
[View Peptides]	SWI1	Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chr...	1	1	0.8%	8.62E-5	147937
[View Peptides]	UTP22	Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis o...	1	1	0.8%	9.16E-5	140484
[View Peptides]	SSD1	Protein with a role in maintenance of cellular integrity, interacts with components of the TOR pathw...	1	1	0.8%	9.06E-5	139954
[View Peptides]	MNN4	Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphoryl...	1	1	0.8%	9.62E-5	139380
[View Peptides]	SNT1	Subunit of the Set3C deacetylase complex that interacts directly with the Set3C subunit, Sif2p; puta...	1	1	0.8%	9.24E-5	138397
[View Peptides]	NUP133	Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), localizes to both sides of the N...	1	1	0.8%	9.79E-5	133320
[View Peptides]	MSB1	Protein involved in positive regulation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway...	1	1	0.8%	9.96E-5	129971
[View Peptides]	AMS1	Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation; delivered to the vac...	1	1	0.8%	1.05E-4	124499
[View Peptides]	CDC60	Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA	1	1	0.8%	1.04E-4	124141
[View Peptides]	BUB1	Protein kinase that forms a complex with Mad1p and Bub3p that is crucial in the checkpoint mechanism...	1	1	0.8%	1.11E-4	117868
[View Peptides]	MTR10	Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo...	1	1	0.8%	1.17E-4	110745
[View Peptides]	NAM7	ATP-dependent RNA helicase of the SFI superfamily involved in nonsense mediated mRNA decay; required...	1	1	0.8%	1.17E-4	109430
[View Peptides]	DCP2	Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex, which removes the 5' cap structure fr...	1	1	0.8%	1.17E-4	108667
[View Peptides]	Reverse_YBL014C	RRN6 SGDID:S000000110, Chr II from 201751-199067, reverse complement, Verified ORF, "Protein involve...	1	1	0.8%	1.27E-4	102034
[View Peptides]	GPB1	Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby incre...	1	1	0.8%	1.26E-4	100940
[View Peptides]	Reverse_YMR165C	SMP2 SGDID:S000004775, Chr XIII from 592627-590039, reverse complement, Verified ORF, "Protein of un...	1	1	0.8%	1.31E-4	95031
[View Peptides]	Reverse_YLR347C	KAP95 SGDID:S000004339, Chr XII from 826412-823827, reverse complement, Verified ORF, "Karyopherin b...	1	1	0.8%	1.31E-4	94776
[View Peptides]	Reverse_YLR430W	SEN1 SGDID:S000004422, Chr XII from 993430-1000125, Verified ORF, "Nuclear protein, putative helicas...	1	1	0.7%	5.07E-5	252495
[View Peptides]	YLR422W	Protein of unknown function with similarity to human DOCK proteins (guanine nucleotide exchange fact...	1	1	0.7%	5.86E-5	221562
[View Peptides]	Reverse_YJL109C	UTP10 SGDID:S000003645, Chr X from 217226-211917, reverse complement, Verified ORF, "Nucleolar prote...	1	1	0.7%	6.4E-5	200080
[View Peptides]	RIM15	Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp...	1	1	0.7%	6.4E-5	196530
[View Peptides]	Reverse_YDR420W	HKR1 SGDID:S000002828, Chr IV from 1306257-1311665, Verified ORF, "Serine/threonine rich cell surfac...	1	7	0.7%	4.4E-4	188947
[View Peptides]	Reverse_YML103C	NUP188 SGDID:S000004571, Chr XIII from 67549-62582, reverse complement, Verified ORF, "Subunit of th...	1	1	0.7%	6.84E-5	188576
[View Peptides]	ULS1	RING finger protein involved in proteolytic control of sumoylated substrates; interacts with SUMO (S...	1	1	0.7%	7.0E-5	184404
[View Peptides]	Reverse_YOR328W	PDR10 SGDID:S000005855, Chr XV from 931798-936492, Verified ORF, "ABC (ATP-binding cassette) membran...	1	1	0.7%	7.24E-5	176460
[View Peptides]	Reverse_YDR127W	ARO1 SGDID:S000002534, Chr IV from 704479-709245, Verified ORF, "Pentafunctional arom protein, catal...	1	1	0.7%	7.13E-5	174754
[View Peptides]	PDR12	Plasma membrane ATP-binding cassette (ABC) transporter, weak-acid-inducible multidrug transporter re...	1	1	0.7%	7.5E-5	171064
[View Peptides]	SPT6	Transcription elongation factor required for the maintenance of chromatin structure during transcrip...	1	1	0.7%	7.81E-5	168291
[View Peptides]	MDS3	Protein with an N-terminal kelch-like domain, putative negative regulator of early meiotic gene expr...	1	1	0.7%	7.62E-5	167074
[View Peptides]	Reverse_YNL102W	POL1 SGDID:S000005046, Chr XIV from 430089-434495, Verified ORF, "Catalytic subunit of the DNA polym...	1	1	0.7%	7.71E-5	166809
[View Peptides]	FIG2	Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall...	1	1	0.7%	7.04E-5	166036
[View Peptides]	PSK1	One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein...	1	1	0.7%	8.35E-5	152330
[View Peptides]	Reverse_YDR216W	ADR1 SGDID:S000002624, Chr IV from 895029-899000, Verified ORF, "Carbon source-responsive zinc-finge...	1	1	0.7%	8.56E-5	150940
[View Peptides]	ECM16	Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP, predominantly nucleolar in ...	1	1	0.7%	8.94E-5	144954
[View Peptides]	HER1	Protein of unknown function required for proliferation or remodeling of the ER that is caused by ove...	1	1	0.7%	9.09E-5	139457
[View Peptides]	Reverse_YDL145C	COP1 SGDID:S000002304, Chr IV from 198177-194572, reverse complement, Verified ORF, "Alpha subunit o...	1	1	0.7%	9.42E-5	135607
[View Peptides]	Reverse_YLR084C	RAX2 SGDID:S000004074, Chr XII from 300252-296590, reverse complement, Verified ORF, "N-glycosylated...	1	1	0.7%	9.28E-5	133959
[View Peptides]	CRM1	Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus; ex...	1	1	0.7%	1.04E-4	124104
[View Peptides]	Reverse_YML075C	HMG1 SGDID:S000004540, Chr XIII from 118898-115734, reverse complement, Verified ORF, "One of two is...	1	1	0.7%	1.07E-4	115625
[View Peptides]	Reverse_YBR112C	CYC8 SGDID:S000000316, Chr II from 465764-462864, reverse complement, Verified ORF, "General transcr...	1	1	0.7%	1.17E-4	107202
[View Peptides]	FLO5	Lectin-like cell wall protein (flocculin) involved in flocculation, binds to mannose chains on the s...	1	1	0.7%	1.05E-4	111981
[View Peptides]	Reverse_YGR271W	SLH1 SGDID:S000003503, Chr VII from 1031797-1037700, Verified ORF, "Putative RNA helicase related to...	1	1	0.6%	5.76E-5	224828
[View Peptides]	USO1	Essential protein involved in the vesicle-mediated ER to Golgi transport step of secretion; binds me...	1	1	0.6%	6.33E-5	206450
[View Peptides]	Reverse_YPR158C-D	YPR158C-D SGDID:S000007362, Chr XVI from 856253-854949,854947-850985, reverse complement, transposab...	1	2	0.6%	1.29E-4	198373
[View Peptides]	Reverse_YLR227W-B	YLR227W-B SGDID:S000007376, Chr XII from 593440-594744,594746-598708, transposable_element_gene, "Ty...	1	2	0.6%	1.29E-4	198404
[View Peptides]	SNF2	Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation...	1	1	0.6%	6.65E-5	194050
[View Peptides]	HIR3	Subunit of the HIR complex, a nucleosome assembly complex involved in regulation of histone gene tra...	1	1	0.6%	6.87E-5	191679
[View Peptides]	CMR2	Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-induc...	1	1	0.6%	6.87E-5	186906
[View Peptides]	BPT1	ABC type transmembrane transporter of MRP/CFTR family, found in vacuolar membrane, involved in the t...	1	1	0.6%	7.27E-5	176873
[View Peptides]	INO80	ATPase, subunit of a complex containing actin and several actin-related proteins that has chromatin ...	1	1	0.6%	7.61E-5	171454
[View Peptides]	TCB3	Lipid-binding protein, localized to the bud via specific mRNA transport; non-tagged protein detected...	1	1	0.6%	7.33E-5	171075
[View Peptides]	YLR419W	Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged pr...	1	1	0.6%	7.89E-5	163044
[View Peptides]	TUS1	Guanine nucleotide exchange factor (GEF) that functions to modulate Rho1p activity as part of the ce...	1	1	0.6%	8.67E-5	149112
[View Peptides]	Reverse_YML081W	YML081W SGDID:S000004546, Chr XIII from 104777-108532, Uncharacterized ORF, "Hypothetical protein"	1	1	0.6%	9.05E-5	141465
[View Peptides]	Reverse_YOR086C	TCB1 SGDID:S000005612, Chr XV from 486780-483220, reverse complement, Verified ORF, "Contains three ...	1	1	0.6%	9.54E-5	133576
[View Peptides]	YPR117W	Putative protein of unknown function	1	1	0.5%	4.55E-5	285902
[View Peptides]	Reverse_YPL231W	FAS2 SGDID:S000006152, Chr XVI from 108652-114315, Verified ORF, "Alpha subunit of fatty acid synthe...	1	1	0.5%	6.0E-5	206945
[View Peptides]	Reverse_YBR208C	DUR1,2 SGDID:S000000412, Chr II from 642205-636698, reverse complement, Verified ORF, "Urea amidolya...	1	1	0.5%	6.17E-5	201831
[View Peptides]	UTP10	Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is ...	1	1	0.5%	6.4E-5	200080
[View Peptides]	Reverse_YDR141C	DOP1 SGDID:S000002548, Chr IV from 739992-734896, reverse complement, Verified ORF, "Protein of unkn...	1	1	0.5%	6.67E-5	194686
[View Peptides]	DOP1	Golgi-localized, leucine-zipper domain containing protein; involved in endosome to Golgi transport, ...	1	1	0.5%	6.67E-5	194686
[View Peptides]	Reverse_YGR281W	YOR1 SGDID:S000003513, Chr VII from 1052830-1057263, Verified ORF, "Plasma membrane transporter of t...	1	1	0.5%	7.66E-5	166727
[View Peptides]	FLO1	Lectin-like protein involved in flocculation, cell wall protein that binds to mannose chains on the ...	1	1	0.5%	7.37E-5	160667
[View Peptides]	GCN1	Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate ...	1	1	0.4%	4.24E-5	296697
[View Peptides]	SEN1	Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs; h...	1	1	0.4%	5.08E-5	252495
[View Peptides]	HFA1	Mitochondrial acetyl-coenzyme A carboxylase, catalyzes the production of malonyl-CoA in mitochondria...	1	1	0.4%	5.34E-5	241784
[View Peptides]	Reverse_YKL182W	FAS1 SGDID:S000001665, Chr XI from 100676-106831, Verified ORF, "Beta subunit of fatty acid syntheta...	1	1	0.4%	5.52E-5	228689
[View Peptides]	DYN1	Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation;...	1	1	0.3%	2.77E-5	471351
[View Peptides]	Reverse_YDR457W	TOM1 SGDID:S000002865, Chr IV from 1369780-1379586, Verified ORF, "E3 ubiquitin ligase of the hect-d...	1	1	0.3%	3.46E-5	374185
[View Peptides]	Reverse_YLL040C	VPS13 SGDID:S000003963, Chr XII from 63644-54210, reverse complement, Verified ORF, "Protein of unkn...	1	1	0.3%	3.6E-5	357850

View Mass Spectrometry Run