YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View MS Result Peptides

Run Information:

Bait Protein: N/A
Hit Protein: DEF1
Protein Desc: RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...
Sequence Coverage: 5.7%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSTQFRKSNH NSHSSKKLNP ALKSKIDTLT ELFPDWTSDD LIDIVQEYDD LETIIDKITS  60
   61  GAVTRWDEVK KPAKKEKYEK KEQQHSYVPQ QHLPNPEDDI TYKSSNNSNS FTSTKHNSSN 120
  121  NYTQARNKKK VQTPRAHTTG KHVNLDKGKH VPSKPVSNTT SWAAAVSVDT KHDVPQDSND 180
  181  NNNEELEAQG QQAQEKNQEK EQEEQQQQEG HNNKEEHKQI EQPSLSSKKT TSRTSASQPK 240
  241  KMSWAAIATP KPKAVKKTES PLENVAELKK EISDIKKDDQ KSEASEEKVN EQETSAQEQE 300
  301  EETAEPSEEN EDRVPEVDGE EVQEEAEKKE QVKEEEQTAE ELEQEQDNVA APEEEVTVVE 360
  361  EKVEISAVIS EPPEDQANTV PQPQQQSQQP QQPQQPQQPQ QPQQPQQQQQ PQQPQQPQQQ 420
  421  LQQQQQQQQQ PVQAQAQAQE EQLSQNYYTQ QQQQQYAQQQ HQLQQQYLSQ QQQYAQQQQQ 480
  481  HPQPQSQQPQ SQQSPQSQKQ GNNVAAQQYY MYQNQFPGYS YPGMFDSQGY AYGQQYQQLA 540
  541  QNNAQTSGNA NQYNFQQGYG QAGANTAAAN LTSAAAAAAA SPATAHAQPQ QQQPYGGSFM 600
  601  PYYAHFYQQS FPYGQPQYGV AGQYPYQLPK NNYNYYQTQN GQEQQSPNQG VAQHSEDSQQ 660
  661  KQSQQQQQQQ PQGQPQPEVQ MQNGQPVNPQ QQMQFQQYYQ FQQQQQQAAA AAAAAAQQGV 720
  721  PYGYNGYDYN SKNSRGFY

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 5.4312 0.3552 4002.9524 7907.8 1 22.7 4 K.SKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 6.5701 0.4201 4787.3926 7972.8 1 21.5 8 K.SKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDKITSGAVTR.W
[No Spectrum] 5.3602 0.369 4573.2734 3390.0 1 23.7 3 K.IDTLTELFPDWTSDDLIDIVQEYDDLETIIDKITSGAVTR.W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle