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View MS Result Peptides

Run Information:

Bait Protein: hcp-1
Hit Protein: pab-1
Protein Desc: RNA recognition motif. (aka RRM, RBD, or RNP domain) \; Poly-adenylate binding protein, unique domai...
Sequence Coverage: 14.6%
Organism: Caenorhabditis elegans
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MEMNVAAPAA AVAGAAAPQP GQNQTGSSYT MASLYVGDLH PDVNESILFE KFSAAGPVLS  60
   61  IRVCRDNATR LSLGYAYVNF QQPADAERAM DTMNFEALHG KPMRIMWSQR DPAMRRSGAG 120
  121  NIFIKNLDKV IDNKSIYDTF SLFGNILSCK VAIDEDGFSK GYGFVHFETE EAAQNAIQKV 180
  181  NGMLLAGKKV FVGKFQPRAQ RNRELGETAK QFTNVYVKNF GDHYNKETLE KLFAKFGNIT 240
  241  SCEVMTVEGK SKGFGFVAFA NPEEAETAVQ ALHDSTIEGT DLKLHVCRAQ KKSERHAELK 300
  301  KKHEQHKAER MQKYQGVNLY VKNLDETVDD DGLKKQFESY GNITSAKVMT DENGRSKGFG 360
  361  FVCFEKPEEA TSAVTEMNSK MVCSKPLYVA IAQRKEDRRA QLASQYMQRL ASMRMHGNVP 420
  421  GAAMYNPTQP GPGYYVANPM QQQRNFAGGQ QMVRPGGRWG MQNQYPVQNQ YMMAQGPGVY 480
  481  QNRMGRPQNQ QGGPRGPPQQ YNQVAQGGVR MQGPPRTQNP GVQQQNVPRP PQQQQQQRPA 540
  541  PTGPKAPPQP YQAYQQRPQG IVIGGQEPLT SAMLAAAAPQ EQKQLLGERI YALIEKLYPG 600
  601  HKDAGKITGM MLEIDNSELI MMLQDSELFR SKVDEAASVL VSAQKQ

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 5.1281 0.404 2044.47 7727.1 1 58.8 1 R.LSLGYAYVNFQQPADAER.A
[No Spectrum] 4.1025 0.416 1672.49 5993.5 1 78.6 1 K.FGNITSCEVMTVEGK.S
[No Spectrum] 3.7236 0.2439 3267.08 6062.7 4 20.0 1 K.GFGFVAFANPEEAETAVQALHDSTIEGTDLK.L
[No Spectrum] 3.5845 0.1673 3277.79 4786.2 1 29.3 1 R.MHGNVPGAAMYNPTQPGPGYYVANPMQQQR.N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle