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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: DEF1
Protein Desc: RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...
Sequence Coverage: 33.9%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSTQFRKSNH NSHSSKKLNP ALKSKIDTLT ELFPDWTSDD LIDIVQEYDD LETIIDKITS  60
   61  GAVTRWDEVK KPAKKEKYEK KEQQHSYVPQ QHLPNPEDDI TYKSSNNSNS FTSTKHNSSN 120
  121  NYTQARNKKK VQTPRAHTTG KHVNLDKGKH VPSKPVSNTT SWAAAVSVDT KHDVPQDSND 180
  181  NNNEELEAQG QQAQEKNQEK EQEEQQQQEG HNNKEEHKQI EQPSLSSKKT TSRTSASQPK 240
  241  KMSWAAIATP KPKAVKKTES PLENVAELKK EISDIKKDDQ KSEASEEKVN EQETSAQEQE 300
  301  EETAEPSEEN EDRVPEVDGE EVQEEAEKKE QVKEEEQTAE ELEQEQDNVA APEEEVTVVE 360
  361  EKVEISAVIS EPPEDQANTV PQPQQQSQQP QQPQQPQQPQ QPQQPQQQQQ PQQPQQPQQQ 420
  421  LQQQQQQQQQ PVQAQAQAQE EQLSQNYYTQ QQQQQYAQQQ HQLQQQYLSQ QQQYAQQQQQ 480
  481  HPQPQSQQPQ SQQSPQSQKQ GNNVAAQQYY MYQNQFPGYS YPGMFDSQGY AYGQQYQQLA 540
  541  QNNAQTSGNA NQYNFQQGYG QAGANTAAAN LTSAAAAAAA SPATAHAQPQ QQQPYGGSFM 600
  601  PYYAHFYQQS FPYGQPQYGV AGQYPYQLPK NNYNYYQTQN GQEQQSPNQG VAQHSEDSQQ 660
  661  KQSQQQQQQQ PQGQPQPEVQ MQNGQPVNPQ QQMQFQQYYQ FQQQQQQAAA AAAAAAQQGV 720
  721  PYGYNGYDYN SKNSRGFY

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 3.0441 0.2105 1379.0 4020.1 1 68.2 1 K.SKIDTLTELFPD.W
[No Spectrum] 5.8455 0.5286 3999.62 9476.3 1 23.5 5 K.SKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 5.119 0.4235 3785.02 4951.6 1 26.6 1 K.IDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 4.4563 0.3378 1462.94 6523.1 1 87.5 1 K.ITSGAVTRWDEVK.K
[No Spectrum] 4.7792 0.3979 2016.62 6135.0 1 41.2 1 K.ITSGAVTRWDEVKKPAKK.E
[No Spectrum] 5.787 0.3577 3474.49 6557.0 1 27.8 7 K.EKYEKKEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 4.5421 0.4006 3214.91 6778.4 1 27.0 4 K.YEKKEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 4.6365 0.517 2795.04 7080.0 1 40.9 1 K.KEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 5.4315 0.4587 2796.7 5144.8 1 37.5 5 K.KEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 3.5839 0.4617 2666.44 6046.8 1 35.7 1 K.EQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 4.496 0.4162 2669.09 5042.9 1 34.5 2 K.EQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 3.8922 0.4632 2283.86 4959.5 1 52.4 1 K.HVPSKPVSNTTSWAAAVSVDTK.H
[No Spectrum] 6.0776 0.4333 2838.88 9544.3 1 43.8 1 K.HDVPQDSNDNNNEELEAQGQQAQEK.N
[No Spectrum] 5.2459 0.413 1945.4 8142.6 1 78.1 1 N.DNNNEELEAQGQQAQEK.N
[No Spectrum] 4.7641 0.1958 3847.16 10253.6 1 21.8 1 K.NQEKEQEEQQQQEGHNNKEEHKQIEQPSLSSK.K
[No Spectrum] 3.1818 0.4359 1428.73 5516.3 1 70.8 3 K.KMSWAAIATPKPK.A
[No Spectrum] 4.9881 0.4075 1430.78 9912.8 1 87.5 3 K.KMSWAAIATPKPK.A
[No Spectrum] 3.5539 0.3406 1432.44 6169.3 1 54.2 1 K.KMSWAAIATPKPK.A
[No Spectrum] 2.4486 0.1688 1300.54 4777.9 1 68.2 1 K.MSWAAIATPKPK.A
[No Spectrum] 3.432 0.2707 1301.83 8169.0 1 68.2 1 K.MSWAAIATPKPK.A
[No Spectrum] 4.1004 0.4317 1884.93 8011.3 1 59.4 1 K.AVKKTESPLENVAELKK.E
[No Spectrum] 5.0444 0.4125 1885.48 9235.6 1 45.3 1 K.AVKKTESPLENVAELKK.E
[No Spectrum] 4.3143 0.3977 1586.43 7634.6 1 73.1 1 K.KTESPLENVAELKK.E
[No Spectrum] 4.3294 0.3115 1587.97 6481.2 2 44.2 1 K.KTESPLENVAELKK.E
[No Spectrum] 5.9117 0.4523 3586.92 8341.0 1 30.2 1 M.PYYAHFYQQSFPYGQPQYGVAGQYPYQLPK.N
[No Spectrum] 5.1408 0.3856 3614.36 9680.8 1 21.7 2 K.NNYNYYQTQNGQEQQSPNQGVAQHSEDSQQK.Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle