DTASelect v1.9
/data/2/shabadu/august2005/sidonie/zds1gel
/scratch/yates/yrcdb/cerv4932.FASTAC
SEQUEST 2.7 in SQT format.
-p 5 -d 0.02 -1 1.2 -2 1.5 -3 2.0
Jump to the summary table.

sequest.params modifications:
*X0.0
#X0.0
@X0.0
StaticC57.0
trueUse criteria
1.2Minimum +1 XCorr
1.5Minimum +2 XCorr
2.0Minimum +3 XCorr
4.5Minimum +4 XCorr
0.02Minimum DeltCN
1Minimum charge state
4Maximum charge state
0.0Minimum ion proportion
1000Maximum Sp rank
-1.0Minimum Sp score
IncludeModified peptide inclusion
AnyTryptic status requirement
trueMultiple, ambiguous IDs allowed
IgnorePeptide validation handling
XCorrPurge duplicate peptides by protein
falseInclude only loci with unique peptide
falseRemove subset proteins
IgnoreLocus validation handling
0Minimum modified peptides per locus
10Minimum redundancy for low coverage loci
5Minimum peptides per locus

Locus Key:

Validation StatusLocusSequence CountSpectrum CountSequence CoverageLengthMolWtpIDescriptive Name

Similarity Key:

Locus# of identical peptides# of differing peptides

UZDS1_YEAST161616.2%9151033586.4(P50111) ZDS1 protein (NRC1 protein) (RT2GS1)
FilenameXCorrDeltCNObsM+H+CalcM+H+SpRSpScoreIon%#Sequence
*zds1gel-01.08662.08662.35.43510.38581786.11787.02312215.053.3%1R.KSEVLIAAQSLDNEIR.S3
*zds1gel-01.14877.14877.22.45690.25741873.331873.21243324.346.9%1R.LSIGSMDLLIDPELDIK.F2
*zds1gel-01.08332.08332.22.79880.02871405.391403.5831746.168.2%1K.NLLWVPANQHPN.V2
*zds1gel-01.07168.07168.12.18330.1561948.47949.04628533.271.4%1R.DITEELTK.I1
*zds1gel-01.07929.07929.33.68360.30441732.461732.88811389.548.4%1K.ISNSAGLTDNDAITLAR.T3
*zds1gel-01.07924.07924.24.83950.46491733.251732.88811483.371.9%1K.ISNSAGLTDNDAITLAR.T2
*zds1gel-01.00009.00009.11.43580.1476902.52901.00413160.342.9%1K.EAEEVPVK.V1
*zds1gel-01.07286.07286.24.25410.32141587.271587.7311641.083.3%1K.VRNDTVEQDLELR.E2
*zds1gel-01.07285.07285.33.82160.13051587.471587.7341172.645.8%1K.VRNDTVEQDLELR.E3
*zds1gel-01.07825.07825.23.93980.34581331.611332.4111272.685.0%1R.NDTVEQDLELR.E2
*zds1gel-01.07186.07186.22.70660.25071265.331265.4111795.375.0%1K.HYISLFNGGEK.T2
*zds1gel-01.08434.08434.21.82790.1675868.43869.0114327.375.0%1K.TFANLFR.R2
*zds1gel-01.07598.07598.21.55190.18881051.911052.2597233.356.2%1R.EPVEPIVLR.N2
*zds1gel-01.07613.07613.33.2960.1082346.892347.5382915.634.5%1K.KEESDSESLPQLQPAVSVSSTK.S3
*zds1gel-01.07644.07644.23.92590.39492347.132347.5381757.750.0%1K.KEESDSESLPQLQPAVSVSSTK.S2
*zds1gel-01.00056.00056.21.66360.1085921.13921.08735115.557.1%1K.HTSILPPR.K2

UCLH_YEAST181811.6%16531872335.2(P22137) Clathrin heavy chain
FilenameXCorrDeltCNObsM+H+CalcM+H+SpRSpScoreIon%#Sequence
*zds1gel-01.07269.07269.22.30590.26051526.111526.6461607.358.3%1R.STTFESDHFVTVR.E2
*zds1gel-01.08236.08236.23.53930.37791303.251303.4551882.270.8%1K.DGTNSVAIVDLAK.G2
*zds1gel-01.10640.10640.33.00330.29362400.892401.7681832.334.5%1R.SILTSNVFDGNVNAKPQLLTLR.H3
*zds1gel-01.08067.08067.23.24710.44071810.391812.0381856.960.0%1R.HANLNNTQIINFVANK.N2
*zds1gel-01.08072.08072.34.73050.28431812.471812.03812174.748.3%1R.HANLNNTQIINFVANK.N3
*zds1gel-01.07577.07577.24.59290.39311857.571858.05811294.470.0%1R.IIEIDHDASLPSQYQK.E2
*zds1gel-01.06770.06770.22.83020.25961067.231067.1847490.175.0%1R.ALENYTDIK.D2
*zds1gel-01.07890.07890.24.39720.42071553.031553.75512309.687.5%1K.FIETYVQQVNPSK.T2
*zds1gel-01.08052.08052.23.61860.49211502.471502.7111186.072.7%1K.RDPYLAYIAYEK.G2
*zds1gel-01.08019.08019.22.90050.2232990.89991.08913934.185.7%1R.SDLDLWNK.V2
*zds1gel-01.11971.11971.23.05510.05431100.071100.3417761.387.5%1K.LELIELLEK.I2
*zds1gel-01.00053.00053.21.64420.053825.63825.93772186.658.3%1K.VSSYIEK.L2
*zds1gel-01.08563.08563.22.56730.10851149.171149.3292650.983.3%1R.IPDAIESYIK.A2
*zds1gel-01.07544.07544.23.44380.29811129.111129.29811194.587.5%1K.VSNLEIYYK.A2
*zds1gel-01.07404.07404.22.12560.1578854.89855.0243411.791.7%1K.AINFYVK.F2
*zds1gel-01.09785.09785.33.29750.34012213.32213.40911207.738.2%1K.ALQDAVDSYDKFDQLGLASR.L3
*zds1gel-01.07209.07209.23.03880.21621007.031007.13431014.681.2%1K.FDQLGLASR.L2
*zds1gel-01.07100.07100.22.41940.1469805.77805.99611042.791.7%1K.IGALLYR.R2
ProteinsPeptide IDsCopies
Unfiltered12129791482
Redundant23434
Nonredundant23434

/data/2/shabadu/august2005/sidonie/zds1gel