DTASelect v2.0.9
/data/1/catclw/Projects/Jonathan/step_1
/scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta
SEQUEST 3.0 in SQT format.

Jump to the summary table.

sequest.params modifications:
*STY80.0
#X0.0
@X0.0
StaticC57.0
trueUse criteria
0.0Minimum peptide confidence
0.05Peptide false positive rate
0.0Minimum protein confidence
1.0Protein false positive rate
1Minimum charge state
9Maximum charge state
0.0Minimum ion proportion
1000Maximum Sp rank
-1.0Minimum Sp score
IncludeModified peptide inclusion
AnyTryptic status requirement
falseMultiple, ambiguous IDs allowed
IgnorePeptide validation handling
XCorrPurge duplicate peptides by protein
falseInclude only loci with unique peptide
trueRemove subset proteins
IgnoreLocus validation handling
0Minimum modified peptides per locus
1000Minimum redundancy for low coverage loci
2Minimum peptides per locus

Locus Key:

Validation StatusLocusSequence CountSpectrum CountSequence CoverageLengthMolWtpIDescriptive Name

Similarity Key:

Locus# of identical peptides# of differing peptides

UYKL089W6422452.8%549624734.8MIF2 SGDID:S000001572, Chr XI from 273038-274687, Verified ORF, "Kinetochore protein with homology to human CENP-C, required for structural integrity of the spindle during anaphase spindle elongation, interacts with histones H2A, H2B, and H4, phosphorylated by Ipl1p"
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.12170.12170.36.11080.3996100.0%3751.73443751.107417.4928.2%2R.KTGIDVKQDIPKDEYSMENIDDFFKDDETSLI.S3
*Mif2_01_itms.12221.12221.34.27170.259897.7%4201.2844205.565435.13820.6%1R.KT*GIDVKQDIPKDEYSMENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.12160.12160.34.58010.2756100.0%4201.2844205.565444.43320.6%1R.KTGIDVKQDIPKDEY*SMENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.12068.12068.35.16490.3008100.0%3523.49443521.828115.87128.4%4T.GIDVKQDIPKDEYSMENIDDFFKDDETSLI.S3
*Mif2_01_itms.07616.07616.24.02910.3459100.0%2236.03222235.426816.63152.9%4K.QDIPKDEYSMENIDDFFK.D2
*Mif2_01_itms.07580.07580.35.79450.2518100.0%2238.56452235.426836.09744.1%3K.QDIPKDEYSMENIDDFFK.D3
*Mif2_01_itms.08373.08373.34.59420.2545100.0%2315.51442315.426814.54438.2%1K.QDIPKDEYS*MENIDDFFK.D3
*Mif2_01_itms.11396.11396.35.06260.3357100.0%3386.99443383.679716.04129.6%10K.QDIPKDEYSMENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.11577.11577.34.81130.221598.4%3545.00443543.679775.01827.8%2K.QDIPKDEY*S*MENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.09206.09206.25.17990.3837100.0%1655.55211653.757217.47987.5%2K.DEYSMENIDDFFK.D2
*Mif2_01_itms.10676.10676.23.62930.3144100.0%1734.31211733.757215.9675.0%2K.DEYS*MENIDDFFK.D2
*Mif2_01_itms.12160.12160.24.5190.4012100.0%2801.19212802.010317.28638.6%2K.DEYSMENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.12422.12422.35.75550.4289100.0%2804.09422802.010317.93336.4%7K.DEYSMENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.13080.13080.33.7120.287697.8%2882.90432882.010315.19336.4%1K.DEYS*MENIDDFFKDDETSLISMR.R3
*Mif2_01_itms.05415.05415.34.35050.20995.5%3218.18433216.40224.1728.6%2K.NVLPPFLQSYKS*QDDEVVQSPSGKGDGSR.R3
*Mif2_01_itms.00926.00926.24.42040.2688100.0%1377.25221376.419816.7283.3%4K.SQDDEVVQSPSGK.G2
*Mif2_01_itms.00908.00908.23.71230.3354100.0%1847.93211848.877816.61752.9%2K.SQDDEVVQSPSGKGDGSR.R2
*Mif2_01_itms.07680.07680.36.04020.3044100.0%3858.95433859.067916.00827.3%6R.RSSLLSHQSNFLSPANDFEPIEEEPEQEENDIR.G3
*Mif2_01_itms.06725.06725.36.73090.4012100.0%3700.37433702.880417.70533.1%16R.SSLLSHQSNFLSPANDFEPIEEEPEQEENDIR.G3
*Mif2_01_itms.07910.07910.36.35840.2067100.0%3784.34423782.880416.92333.1%9R.SSLLSHQSNFLS*PANDFEPIEEEPEQEENDIR.G3
*Mif2_01_itms.06819.06819.36.11310.3433100.0%3875.33423874.036115.93324.2%1R.SSLLSHQSNFLSPANDFEPIEEEPEQEENDIRGN.D3
*Mif2_01_itms.08500.08500.35.41840.3007100.0%4876.61434876.171416.76419.0%4R.SSLLSHQSNFLSPANDFEPIEEEPEQEENDIRGNDFATPITQK.L3
*Mif2_01_itms.11356.11356.34.84330.233599.1%4434.95464431.68315.53223.0%7S.SLLSHQSNFLSPANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.11214.11214.34.70980.198197.9%4513.43464511.68315.19323.7%3S.SLLSHQSNFLS*PANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.08397.08397.35.02230.2202100.0%4118.2444118.28614.7522.9%1L.SHQSNFLSPANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.06392.06392.23.540.16596.1%3079.25223078.185814.4832.0%2H.QSNFLSPANDFEPIEEEPEQEENDIR.G2
*Mif2_01_itms.06452.06452.35.24870.3526100.0%3081.41433078.185826.17128.0%2H.QSNFLSPANDFEPIEEEPEQEENDIR.G3
*Mif2_01_itms.11649.11649.34.01640.3201100.0%3845.69433845.936265.96419.5%1Q.SNFLS*PANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.07492.07492.34.39330.271899.1%4123.64454123.34625.83820.7%1Q.SNFLSPANDFEPIEEEPEQEENDIRGNDFATPITQK.L3
*Mif2_01_itms.10066.10066.35.49870.4656100.0%3680.15433678.85817.64329.8%3S.NFLSPANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.11883.11883.35.29570.3327100.0%3760.04443758.85816.09626.6%1S.NFLS*PANDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.07779.07779.34.19110.279298.4%4037.78444036.267815.54222.1%2S.NFLSPANDFEPIEEEPEQEENDIRGNDFATPITQK.L3
*Mif2_01_itms.05787.05787.24.52380.3762100.0%2746.8922748.87316.95745.5%4N.FLSPANDFEPIEEEPEQEENDIR.G2
*Mif2_01_itms.05816.05816.34.77770.2496100.0%2751.59422748.87315.75843.2%2N.FLSPANDFEPIEEEPEQEENDIR.G3
*Mif2_01_itms.07403.07403.22.97630.288699.2%2828.1122828.87325.61636.4%1N.FLS*PANDFEPIEEEPEQEENDIR.G2
*Mif2_01_itms.06509.06509.22.81390.258496.7%3046.59233049.144314.78332.0%1A.NDFEPIEEEPEQEENDIRGNDFATPI.T2
*Mif2_01_itms.06446.06446.33.77590.268495.5%3051.20433049.144315.12235.0%1A.NDFEPIEEEPEQEENDIRGNDFATPI.T3
*Mif2_01_itms.05204.05204.35.41020.3358100.0%3406.31453406.554215.55835.7%2A.NDFEPIEEEPEQEENDIRGNDFATPITQK.L3
*Mif2_01_itms.06675.06675.35.60230.3078100.0%3520.76443519.713615.91331.9%4A.NDFEPIEEEPEQEENDIRGNDFATPITQKL.S3
*Mif2_01_itms.05337.05337.35.42020.3392100.0%3486.92433486.598116.89529.3%2R.LTPDRITNKNVYS*DVPDLVADEDDDDRVNT.S3
*Mif2_01_itms.06842.06842.25.54080.4671100.0%2135.03222133.05717.85285.3%10K.NVYS*DVPDLVADEDDDDR.V2
*Mif2_01_itms.07598.07598.35.95690.3137100.0%3302.15433301.499315.80926.9%2K.SNKPVLDIDKIVTYDES*EDEEEILAAQR.R3
*Mif2_01_itms.05556.05556.25.40530.2173100.0%2274.31232271.223615.2773.5%9K.IVT*YDES*EDEEEILAAQR.R2
*Mif2_01_itms.04725.04725.23.47340.256100.0%1797.51221796.928615.24764.3%1K.ENLIPEDPNEDIIER.I2
*Mif2_01_itms.05140.05140.22.87960.223595.5%1514.27221512.573115.3870.8%1R.IES*GGIENGEWLK.H2
*Mif2_01_itms.06161.06161.22.57730.321397.8%1849.57211853.0851665.76234.4%1R.IESGGIENGEWLKHGIL.E2
*Mif2_01_itms.06268.06268.23.80460.162797.9%2054.73222053.2793634.51541.7%1R.IESGGIENGEWLKHGILEA.N2
*Mif2_01_itms.02427.02427.22.74990.224897.8%981.3122981.1398315.35187.5%1K.HGILEANVK.I2
*Mif2_01_itms.04220.04220.34.18530.2493100.0%1937.51441934.15115.9646.9%1A.NVKISDTKEETKDEIIA.F3
*Mif2_01_itms.05408.05408.35.79420.3087100.0%2936.99442936.242715.8140.0%6K.ISDTKEETKDEIIAFAPNLSQTEQVK.D3
*Mif2_01_itms.05111.05111.35.32050.2912100.0%3018.86433016.242714.87131.0%1K.ISDTKEETKDEIIAFAPNLS*QTEQVK.D3
*Mif2_01_itms.05186.05186.36.45430.2873100.0%2394.02442391.637216.37246.2%2K.EETKDEIIAFAPNLSQTEQVK.D3
*Mif2_01_itms.05451.05451.23.85630.186899.2%2471.75222471.637214.57857.5%2K.EETKDEIIAFAPNLS*QTEQVK.D2
*Mif2_01_itms.05505.05505.34.33950.308100.0%2473.25442471.637225.12840.0%1K.EETKDEIIAFAPNLS*QTEQVK.D3
*Mif2_01_itms.05649.05649.24.25340.2491100.0%1904.05211904.127216.85665.6%2K.DEIIAFAPNLSQTEQVK.D2
*Mif2_01_itms.08318.08318.25.79960.3605100.0%1818.63221817.020417.23275.0%11K.DTKDENFALEIMFDK.H2
*Mif2_01_itms.08354.08354.35.15430.1552100.0%1820.30431817.020414.30853.6%8K.DTKDENFALEIMFDK.H3
*Mif2_01_itms.10130.10130.25.53720.1122100.0%1474.61221472.652716.05886.4%18K.DENFALEIMFDK.H2
*Mif2_01_itms.07070.07070.23.35230.3358100.0%1902.31211900.1008195.31143.8%2K.GSTFQIPAFNEYAIANR.G2
*Mif2_01_itms.08213.08213.24.43480.3736100.0%2076.1522075.21127.02850.0%10K.MFFVQVTVSEDANDDNDK.E2
*Mif2_01_itms.27172.27172.34.39350.269899.1%3346.01443348.3564304.53722.2%2K.MFFVQVTVSEDANDDNDKELDS*T*FDTFG.-3
*Mif2_01_itms.12524.12524.34.66710.217697.7%3347.06453348.356414.05332.4%3K.MFFVQVTVSEDANDDNDKELDS*TFDT*FG.-3
*Mif2_01_itms.12546.12546.34.63290.199797.2%3348.71443348.356414.526.9%1K.MFFVQVTVSEDANDDNDKELDST*FDT*FG.-3
*Mif2_01_itms.05571.05571.25.03160.3066100.0%2478.93212478.495616.22559.5%2Q.VTVSEDANDDNDKELDSTFDTF.G2

UYBL003C2522.0%1321398910.7HTA2 SGDID:S000000099, Chr II from 235795-235397, reverse complement, Verified ORF, "One of two nearly identical (see also HTA1) histone H2A subtypes; core histone required for chromatin assembly and chromosome function; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p "
UYDR225W2522.0%1321398910.7HTA1 SGDID:S000002633, Chr IV from 915524-915922, Verified ORF, "One of two nearly identical (see also HTA2) histone H2A subtypes; core histone required for chromatin assembly and chromosome function; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p "
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
Mif2_01_itms.35487.35487.25.64060.4463100.0%2946.71222947.401418.40446.4%1R.IGSGAPVYLTAVLEYLAAEILELAGNAAR.D2
Mif2_01_itms.35576.35576.36.28660.3901100.0%2948.45432947.401417.35333.9%4R.IGSGAPVYLTAVLEYLAAEILELAGNAAR.D3

Ucontaminant_KERATIN0261717.0%622619875.2no description
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.01166.01166.24.76440.5181100.0%1232.33221233.283319.54186.7%2T.SGGGGGGGLGSGGSIR.S2
*Mif2_01_itms.01304.01304.23.98850.3855100.0%1146.09221146.205217.24682.1%3S.GGGGGGGLGSGGSIR.S2
*Mif2_01_itms.00524.00524.23.35620.3088100.0%1236.83221236.240116.4275.0%6R.FSSSSGYGGGSSR.V2
*Mif2_01_itms.12879.12879.33.90390.3297100.0%2905.40432904.159715.84934.4%1K.NYSPYYNTIDDLKDQIVDLTVGNNK.T3
*Mif2_01_itms.08972.08972.36.47420.4088100.0%3266.51443266.41317.71733.9%4K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E3
*Mif2_01_itms.00305.00305.25.1270.2947100.0%1794.45211792.732418.26854.5%1R.GGSGGSYGGGGSGGGYGGGSGSR.G2

UYKL049C3913.5%229268419.3CSE4 SGDID:S000001532, Chr XI from 346408-345719, reverse complement, Verified ORF, "Centromere protein that resembles histones, required for proper kinetochore function; homolog of human CENP-A"
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.03731.03731.34.6450.3276100.0%1990.49441988.124515.86351.5%2R.SLSNVNRLAGDQQSINDR.A3
*Mif2_01_itms.00812.00812.23.66420.3161100.0%1217.15221217.28116.39585.0%6R.LAGDQQSINDR.A2
*Mif2_01_itms.05877.05877.23.31380.3615100.0%1463.67211461.744645.96962.5%1R.STDLLISKIPFAR.L2

Ucontaminant_gi|67568|pir||ELPG41112.8%266288218.1pancreatic elastase (EC 3.4.21.36) I precursor - pig
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.06416.06416.24.34220.2418100.0%2122.6522120.325715.87966.7%5K.IVVHPYWNTDDVAAGYDIA.L2
*Mif2_01_itms.05744.05744.23.89630.2433100.0%2007.51222007.166315.89355.9%2I.VVHPYWNTDDVAAGYDIA.L2
*Mif2_01_itms.12246.12246.23.16360.3351100.0%1539.19211537.755716.54865.4%1R.VSAYISWINNVIAS.N2
*Mif2_01_itms.12131.12131.24.75470.3144100.0%1652.73221651.859517.12375.0%3R.VSAYISWINNVIASN.-2

Ucontaminant_gi|135017|sp|P07518|SUBT_BAC487.6%275276566.8SUBTILISIN (ALKALINE MESENTERICOPEPTIDASE)
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.06428.06428.24.54950.4445100.0%2045.47222045.386717.2755.0%3A.ALNNSIGVLGVAPSSALYAVK.V2
*Mif2_01_itms.05606.05606.24.19080.3692100.0%1862.33221861.148415.99558.3%2L.NNSIGVLGVAPSSALYAVK.V2
*Mif2_01_itms.05638.05638.34.5430.3064100.0%1863.32431861.148415.15444.4%2L.NNSIGVLGVAPSSALYAVK.V3
*Mif2_01_itms.03398.03398.22.90090.3841100.0%1165.21221163.359315.82768.2%1L.GVAPSSALYAVK.V2

Ucontaminant_KERATIN03236.9%593595195.2no description
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
*Mif2_01_itms.11823.11823.34.96630.3124100.0%2875.34422874.213415.77730.8%2R.NVSTGDVNVEMNAAPGVDLTQLLNNMR.S3
*Mif2_01_itms.02176.02176.23.20670.200696.6%1263.29221263.306625.24269.2%1R.SLLEGEGSSGGGGR.G2

Ucontaminant_KERATIN182103.7%562598228.0no description
Ucontaminant_KERATIN222103.3%645658658.0no description
Ucontaminant_KERATIN212105.9%357392195.2no description
FilenameXCorrDeltCNConf%ObsM+H+CalcM+H+SpRZScoreIon%#Sequence
Mif2_01_itms.09075.09075.24.3540.141100.0%1332.17211330.521115.2581.8%2R.NLDLDSIIAEVK.A2
Mif2_01_itms.21614.21614.36.06830.3998100.0%2421.83422419.69417.83446.2%8R.NLDLDSIIAEVKAQYEEIAQR.S3
ProteinsPeptide IDsSpectra
Unfiltered96544053944076
Filtered887287
Forward matches887287
Decoy matches000
Forward FP rate0.0%0.0%0.0%

/data/1/catclw/Projects/Jonathan/step_1