D parc

DTASelect v2.0.16
/data/6/jamest/xu/nov07/hx14/parc
/scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta
SEQUEST 3.0 in SQT format.
--trypstat
Jump to the summary table.

sequest.params modifications:

*	X	0.0
#	X	0.0
@	X	0.0
Static	C	57.0

true	Use criteria
0.0	Minimum peptide confidence
0.05	Peptide false positive rate
0.0	Minimum protein confidence
1.0	Protein false positive rate
1	Minimum charge state
16	Maximum charge state
0.0	Minimum ion proportion
1000	Maximum Sp rank
-1.0	Minimum Sp score
Include	Modified peptide inclusion
Any	Tryptic status requirement
false	Multiple, ambiguous IDs allowed
Ignore	Peptide validation handling
XCorr	Purge duplicate peptides by protein
false	Include only loci with unique peptide
true	Remove subset proteins
Ignore	Locus validation handling
0	Minimum modified peptides per locus
1000	Minimum redundancy for low coverage loci
2	Minimum peptides per locus

Locus Key:

Validation Status

Locus

Sequence Count

Spectrum Count

Sequence Coverage

Length

MolWt

Descriptive Name

Similarity Key:

Locus

# of identical peptides

# of differing peptides

YBL050W

61.6%

292

32803

5.1

SEC17 SGDID:S000000146, Chr II from 125128-125157,125274-126122, Verified ORF, "Peripheral membrane protein required for vesicular transport between ER and Golgi and for the 'priming' step in homotypic vacuole fusion, part of the cis-SNARE complex; has similarity to alpha-SNAP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08157.08157.1	2.556	0.2559	100.0%	1003.45	1004.08435	1	4.505	75.0%	1	K.LFSGSDSYK.F	1
*	PARC_hx_14_02_itms.08156.08156.2	2.0954	0.0257	98.6%	1004.1122	1004.08435	46	3.392	68.8%	1	K.LFSGSDSYK.F	2
*	PARC_hx_14_04_itms.10673.10673.2	5.4176	0.5075	100.0%	1858.5721	1858.024	1	9.676	73.3%	6	K.FEEAADLCVQAATIYR.L	2
*	PARC_hx_14_03_itms.11576.11576.1	2.8826	0.2286	100.0%	1206.6	1207.369	1	4.942	70.0%	3	K.ELNLAGDSFLK.A	1
*	PARC_hx_14_03_itms.11546.11546.2	3.2601	0.24	100.0%	1207.2522	1207.369	1	4.406	80.0%	4	K.ELNLAGDSFLK.A	2
*	PARC_hx_14_02_itms.07978.07978.2	5.5504	0.4515	100.0%	1859.3522	1859.9438	1	7.434	71.9%	5	K.KAGNEDEAGNTYVEAYK.C	2
*	PARC_hx_14_02_itms.08127.08127.2	5.0545	0.4578	100.0%	1734.2722	1731.7698	1	7.942	73.3%	2	K.AGNEDEAGNTYVEAYK.C	2
*	PARC_hx_14_02_itms.16100.16100.2	4.6215	0.502	100.0%	1935.5922	1936.0856	1	8.541	63.9%	3	K.SGGNSVNAVDSLENAIQIF.T	2
*	PARC_hx_14_04_itms.14847.14847.2	3.2441	0.2215	97.9%	1707.6721	1707.834	1	5.735	61.5%	1	K.FELGEILENDLHDY.A	2
*	PARC_hx_14_05_itms.14924.14924.2	2.9202	0.0158	99.2%	1908.8722	1907.0869	1	3.642	60.0%	3	K.FELGEILENDLHDYAK.A	2
*	PARC_hx_14_04_itms.12125.12125.3	3.2519	0.2912	100.0%	3946.7944	3945.254	2	5.167	18.9%	1	E.ILENDLHDYAKAIDCYELAGEWYAQDQSVALSNK.C	3
*	PARC_hx_14_05_itms.14043.14043.2	5.0142	0.475	100.0%	2632.2322	2632.809	1	8.675	45.5%	5	K.AIDCYELAGEWYAQDQSVALSNK.C	2
*	PARC_hx_14_05_itms.14007.14007.3	5.4623	0.4728	100.0%	2632.9143	2632.809	1	8.209	40.9%	2	K.AIDCYELAGEWYAQDQSVALSNK.C	3
*	PARC_hx_14_03_itms.10600.10600.2	4.4985	0.4562	100.0%	2009.4521	2010.1675	1	7.799	55.9%	1	Y.ELAGEWYAQDQSVALSNK.C	2
*	PARC_hx_14_03_itms.10130.10130.2	5.717	0.4604	100.0%	1673.4321	1673.8169	1	8.377	82.1%	5	K.ALDGQYIEASDIYSK.L	2
*	PARC_hx_14_03_itms.09350.09350.2	2.2706	0.0492	99.3%	863.7922	862.0165	19	2.766	91.7%	1	R.LSQWSLK.D	2
*	PARC_hx_14_03_itms.09903.09903.2	5.4307	0.3219	100.0%	1488.8522	1488.65	1	8.329	75.0%	8	K.GLCQLAATDAVAAAR.T	2
*	PARC_hx_14_03_itms.09970.09970.2	5.0743	0.4301	100.0%	1842.8922	1843.8987	1	7.509	75.0%	2	K.SLIDAVNEGDSEQLSEH.C	2
*	PARC_hx_14_04_itms.09350.09350.2	5.2946	0.5056	100.0%	2131.5522	2132.2117	1	8.69	66.7%	6	K.SLIDAVNEGDSEQLSEHCK.E	2
*	PARC_hx_14_03_itms.09488.09488.2	4.9733	0.3095	100.0%	1560.5122	1559.7136	1	5.471	70.8%	6	K.IKESIQQQEDDLL.-	2

contaminant_KERATIN02

49.2%

622

61987

5.2

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.07526.07526.2	4.6716	0.456	100.0%	1232.9722	1233.2833	1	8.541	86.7%	2	T.SGGGGGGGLGSGGSIR.S	2
*	PARC_hx_14_03_itms.07596.07596.2	3.6377	0.2854	100.0%	1145.9521	1146.2052	1	6.299	75.0%	1	S.GGGGGGGLGSGGSIR.S	2
*	PARC_hx_14_03_itms.07113.07113.2	3.539	0.4994	100.0%	1236.4321	1236.2401	1	7.829	87.5%	3	R.FSSSSGYGGGSSR.V	2
*	PARC_hx_14_05_itms.11156.11156.2	4.9582	0.5677	100.0%	2023.8922	2024.0703	1	9.814	52.2%	1	Y.SYGGGSGGGFSASSLGGGFGGGSR.G	2
*	PARC_hx_14_02_itms.09083.09083.2	4.4586	0.3404	100.0%	1692.1522	1692.7826	1	7.155	60.5%	2	L.GGFGGGAGGGDGGILTANEK.S	2
*	PARC_hx_14_02_itms.07326.07326.2	3.07	0.3022	100.0%	1066.1721	1066.1742	2	5.973	87.5%	3	K.STMQELNSR.L	2
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
*	PARC_hx_14_02_itms.08296.08296.2	5.4095	0.4485	100.0%	1587.2722	1587.6836	1	7.881	88.5%	4	K.VQALEEANNDLENK.I	2
*	PARC_hx_14_02_itms.08561.08561.1	1.8723	0.1263	100.0%	967.38	968.05383	7	4.048	66.7%	2	K.IQDWYDK.K	1
*	PARC_hx_14_02_itms.08498.08498.2	2.516	0.0463	99.7%	967.8522	968.05383	9	3.609	91.7%	1	K.IQDWYDK.K	2
*	PARC_hx_14_03_itms.08212.08212.2	2.3043	0.103	99.7%	1096.4321	1096.2279	176	3.535	71.4%	1	K.IQDWYDKK.G	2
*	PARC_hx_14_03_itms.10508.10508.2	2.9733	0.1992	99.9%	1607.1522	1606.7289	1	4.839	79.2%	3	K.NYSPYYNTIDDLK.D	2
*	PARC_hx_14_02_itms.09190.09190.2	4.8164	0.3523	100.0%	1316.3121	1316.4539	1	6.803	86.4%	2	K.DQIVDLTVGNNK.T	2
*	PARC_hx_14_02_itms.09477.09477.2	2.9525	0.1247	99.8%	1063.1522	1061.1802	1	4.044	93.8%	2	K.TLLDIDNTR.M	2
*	PARC_hx_14_02_itms.09896.09896.1	2.0694	0.0913	98.1%	897.48	898.02155	2	3.943	75.0%	2	R.MTLDDFR.I	1
*	PARC_hx_14_02_itms.09963.09963.2	2.0774	0.1185	99.6%	897.8522	898.02155	7	3.993	83.3%	2	R.MTLDDFR.I	2
*	PARC_hx_14_02_itms.08660.08660.2	2.2858	0.071	99.4%	1067.4922	1067.2048	21	4.702	78.6%	1	K.FEMEQNLR.Q	2
*	PARC_hx_14_02_itms.08606.08606.2	3.259	0.3594	100.0%	1158.3322	1158.2566	1	6.357	80.0%	3	R.QGVDADINGLR.Q	2
*	PARC_hx_14_02_itms.09321.09321.1	2.0689	0.1258	97.8%	1190.61	1191.385	1	3.991	66.7%	1	R.QVLDNLTMEK.S	1
*	PARC_hx_14_02_itms.09362.09362.2	2.9688	0.1795	99.9%	1191.0322	1191.385	2	4.386	83.3%	2	R.QVLDNLTMEK.S	2
*	PARC_hx_14_05_itms.17426.17426.2	5.8486	0.3017	100.0%	2171.9321	2172.4702	1	7.281	70.6%	16	K.SDLEMQYETLQEELMALK.K	2
*	PARC_hx_14_04_itms.09644.09644.2	5.3004	0.4865	100.0%	2517.7722	2517.727	1	9.402	50.0%	3	K.EEMSQLTGQNSGDVNVEINVAPGK.D	2
*	PARC_hx_14_02_itms.08558.08558.2	2.1089	0.0643	99.0%	1121.8121	1122.2633	1	4.347	87.5%	1	R.QEYEQLIAK.N	2
*	PARC_hx_14_05_itms.14903.14903.2	4.3945	0.371	100.0%	1990.1122	1989.2512	1	7.189	62.5%	1	Q.MIQEQISNLEAQITDVR.Q	2
*	PARC_hx_14_03_itms.12022.12022.2	5.6203	0.4729	100.0%	1856.9321	1858.0587	1	8.272	73.3%	4	M.IQEQISNLEAQITDVR.Q	2
*	PARC_hx_14_05_itms.14144.14144.2	5.6589	0.4418	100.0%	2095.7722	2096.308	1	8.275	68.8%	15	R.QEIECQNQEYSLLLSIK.M	2
*	PARC_hx_14_03_itms.07917.07917.3	8.0984	0.5914	100.0%	3223.9443	3225.1118	1	10.917	29.5%	4	R.GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK.S	3

Similarities: contaminant_KERATIN03(2:26)
contaminant_KERATIN05(2:26)
contaminant_KERATIN08(2:26)
contaminant_KERATIN12(2:26)
contaminant_KERATIN07(2:26)
contaminant_KERATIN10(2:26)

YDR382W

49.1%

110

11050

4.1

RPP2B SGDID:S000002790, Chr IV from 1239482-1239814, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10217.10217.2	4.5144	0.3903	100.0%	1638.0721	1638.9047	1	8.314	75.0%	1	Y.LLLVQGGNAAPSAADIK.A	2
*	PARC_hx_14_02_itms.08542.08542.2	4.2741	0.3086	100.0%	1430.9922	1431.5425	1	8.498	76.9%	1	K.AVVESVGAEVDEAR.I	2
*	PARC_hx_14_03_itms.11498.11498.2	2.7429	0.0237	99.3%	1203.6921	1203.3782	5	3.189	80.0%	1	R.INELLSSLEGK.G	2
*	PARC_hx_14_03_itms.10757.10757.2	3.6465	0.2504	100.0%	1274.4122	1274.4136	1	5.852	72.7%	3	K.GSLEEIIAEGQK.K	2

YGL212W

48.7%

316

36711

8.4

VAM7 SGDID:S000003180, Chr VII from 91436-92386, Verified ORF, "Component of the vacuole SNARE complex involved in vacuolar morphogenesis; SNAP-25 homolog; functions with a syntaxin homolog Vam3p in vacuolar protein trafficking"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09602.09602.2	3.7527	0.3097	100.0%	1241.8522	1241.4294	1	6.728	90.0%	3	K.YVLYGVSTPNK.R	2
*	PARC_hx_14_02_itms.10398.10398.2	1.6861	0.0763	97.7%	1468.7522	1468.603	71	3.769	54.2%	1	R.DVGSTIPYDFPEK.P	2
*	PARC_hx_14_04_itms.12134.12134.2	2.6953	0.2287	96.7%	1834.5521	1835.0637	1	4.931	50.0%	2	R.DVGSTIPYDFPEKPGVL.D	2
*	PARC_hx_14_02_itms.08145.08145.2	2.7606	0.3304	100.0%	1439.0322	1439.5396	1	5.328	75.0%	5	R.RYDDPEMIDER.R	2
*	PARC_hx_14_03_itms.10118.10118.1	2.2566	0.2368	100.0%	1183.7	1184.2938	3	4.355	62.5%	1	R.FLNELYNDR.F	1
*	PARC_hx_14_03_itms.10142.10142.2	3.5449	0.2582	100.0%	1183.9722	1184.2938	1	4.952	93.8%	6	R.FLNELYNDR.F	2
*	PARC_hx_14_03_itms.10760.10760.2	3.7342	0.2008	100.0%	1163.0922	1163.3593	1	5.192	83.3%	2	K.IAQDFLQLSK.P	2
*	PARC_hx_14_02_itms.08229.08229.2	4.272	0.3185	100.0%	1532.5521	1532.6476	1	6.216	80.8%	7	K.LDLDKESDGTPSVR.G	2
*	PARC_hx_14_02_itms.07754.07754.2	2.1597	0.3242	100.0%	989.77216	990.10144	1	4.578	87.5%	2	K.SLPSTEVTR.R	2
*	PARC_hx_14_02_itms.07689.07689.2	3.8313	0.3639	100.0%	1578.5322	1578.5989	1	6.276	73.1%	2	K.ECDDIGTANIAQDR.G	2
*	PARC_hx_14_03_itms.08684.08684.2	5.3928	0.4951	100.0%	1836.0122	1835.9658	1	10.959	76.5%	6	R.LLGVATSDNSSTTEVQGR.T	2
*	PARC_hx_14_02_itms.08342.08342.2	4.674	0.4375	100.0%	1664.3922	1663.864	1	7.788	76.9%	4	R.TNNDLQQGQMQMVR.D	2
*	PARC_hx_14_03_itms.08738.08738.2	4.2909	0.3515	100.0%	1337.8722	1338.463	1	7.593	85.0%	11	R.DQEQELVALHR.I	2
*	PARC_hx_14_03_itms.13526.13526.2	4.234	0.3818	100.0%	1776.1522	1775.867	1	8.016	66.7%	1	Q.NELLTALEDDVDNTGR.R	2

contaminant_KERATIN03

139

47.6%

593

59519

5.2

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08206.08206.2	3.18	0.226	98.9%	1133.8522	1133.1625	2	5.044	81.8%	1	F.SSGGFSGGSFSR.G	2
	PARC_hx_14_02_itms.07904.07904.2	3.0068	0.2073	100.0%	1090.9922	1091.2273	2	5.017	93.8%	2	K.VTMQNLNDR.L	2 2 2
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
*	PARC_hx_14_02_itms.08204.08204.1	3.3005	0.3093	100.0%	1381.61	1382.4668	3	5.834	63.6%	2	R.ALEESNYELEGK.I	1
*	PARC_hx_14_02_itms.08193.08193.2	4.6051	0.4428	100.0%	1382.3922	1382.4668	1	8.568	81.8%	3	R.ALEESNYELEGK.I	2
*	PARC_hx_14_03_itms.09465.09465.2	2.5513	0.0093	99.5%	996.4922	996.15094	13	3.215	91.7%	6	K.IKEWYEK.H	2
*	PARC_hx_14_05_itms.06345.06345.2	3.0518	0.4681	100.0%	1118.8322	1119.1416	1	7.897	88.9%	3	K.HGNSHQGEPR.D	2
*	PARC_hx_14_04_itms.14324.14324.2	3.8355	0.1281	99.9%	2369.7522	2368.6523	1	4.193	52.5%	1	K.NQILNLTTDNANILLQIDNAR.L	2
*	PARC_hx_14_04_itms.14277.14277.3	3.568	0.0478	100.0%	2370.8643	2368.6523	2	3.489	40.0%	1	K.NQILNLTTDNANILLQIDNAR.L	3
*	PARC_hx_14_04_itms.11837.11837.2	3.2213	0.2616	98.8%	1899.9122	1900.099	1	6.177	56.2%	1	L.NLTTDNANILLQIDNAR.L	2
	PARC_hx_14_03_itms.09884.09884.2	3.0129	0.1294	98.2%	1056.8922	1056.2504	9	3.622	87.5%	1	N.ILLQIDNAR.L	2 2
	PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.L	1 1 1 1 1 1
	PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.L	2 2 2 2 2 2
*	PARC_hx_14_03_itms.09015.09015.2	3.8081	0.2685	100.0%	1235.2722	1235.4258	1	5.784	94.4%	22	R.LKYENEVALR.Q	2
*	PARC_hx_14_02_itms.07714.07714.1	2.0032	0.2274	100.0%	993.46	994.0923	1	5.27	64.3%	1	K.YENEVALR.Q	1
*	PARC_hx_14_02_itms.07768.07768.2	2.7132	0.2395	100.0%	993.8722	994.0923	1	5.562	100.0%	2	K.YENEVALR.Q	2
	PARC_hx_14_03_itms.09760.09760.2	2.7253	0.2258	98.1%	1358.7722	1358.4972	1	5.088	72.7%	1	L.RQSVEADINGLR.R	2 2
	PARC_hx_14_02_itms.08974.08974.2	3.4642	0.2499	100.0%	1203.4922	1202.3097	1	5.874	85.0%	3	R.QSVEADINGLR.R	2 2
*	PARC_hx_14_02_itms.09746.09746.1	2.136	0.1752	100.0%	1031.57	1032.2224	15	4.034	75.0%	2	R.VLDELTLTK.A	1
*	PARC_hx_14_02_itms.09741.09741.2	3.4627	0.2739	100.0%	1032.3322	1032.2224	2	5.247	93.8%	2	R.VLDELTLTK.A	2
*	PARC_hx_14_05_itms.19835.19835.2	5.9946	0.462	100.0%	2099.652	2097.3853	1	8.749	67.6%	4	K.ADLEMQIESLTEELAYLK.K	2
*	PARC_hx_14_05_itms.17249.17249.3	4.5133	0.2249	100.0%	2872.9143	2874.2134	1	6.495	29.8%	1	R.NVSTGDVNVEMNAAPGVDLTQLLNNMR.S	3
*	PARC_hx_14_02_itms.07712.07712.2	4.4798	0.372	100.0%	1367.2922	1366.43	1	6.773	85.0%	3	R.SQYEQLAEQNR.K	2
*	PARC_hx_14_03_itms.07298.07298.2	3.8274	0.3091	100.0%	1494.8922	1494.6041	1	5.839	77.3%	6	R.SQYEQLAEQNRK.D	2
*	PARC_hx_14_02_itms.09852.09852.1	2.9314	0.2873	100.0%	1109.52	1110.1681	1	6.512	62.5%	3	K.DAEAWFNEK.S	1
*	PARC_hx_14_02_itms.09908.09908.2	3.1737	0.2337	100.0%	1110.2122	1110.1681	1	6.008	81.2%	2	K.DAEAWFNEK.S	2
*	PARC_hx_14_03_itms.12278.12278.2	5.7432	0.3702	100.0%	1998.3522	1998.151	1	8.13	71.9%	26	K.ELTTEIDNNIEQISSYK.S	2
*	PARC_hx_14_02_itms.07749.07749.2	1.9764	0.0657	99.0%	848.0522	847.94385	51	3.622	83.3%	1	K.SEITELR.R	2
*	PARC_hx_14_03_itms.07574.07574.2	1.7379	0.0406	98.0%	1004.2322	1004.1313	13	3.193	85.7%	4	K.SEITELRR.N	2
*	PARC_hx_14_02_itms.09224.09224.2	4.1055	0.4761	100.0%	1390.9521	1391.4778	1	7.36	83.3%	4	K.QSLEASLAETEGR.Y	2
*	PARC_hx_14_02_itms.09468.09468.2	2.8927	0.1987	98.1%	1339.5721	1338.4694	1	4.756	70.0%	1	R.YCVQLSQIQAQ.I	2
*	PARC_hx_14_04_itms.11423.11423.2	3.9532	0.2779	100.0%	1627.8121	1627.8381	1	6.212	76.9%	1	Q.AQISALEEQLQQIR.A	2
*	PARC_hx_14_04_itms.10502.10502.2	4.5618	0.2262	100.0%	1428.7722	1428.6285	1	5.25	81.8%	5	Q.ISALEEQLQQIR.A	2
*	PARC_hx_14_02_itms.11199.11199.2	6.0456	0.3792	100.0%	2083.5522	2084.2104	1	7.81	68.8%	13	R.AETECQNTEYQQLLDIK.I	2
*	PARC_hx_14_02_itms.07959.07959.1	2.5907	0.0702	97.9%	1165.62	1166.2761	92	4.005	62.5%	1	R.LENEIQTYR.S	1
*	PARC_hx_14_02_itms.08012.08012.2	3.4169	0.1756	100.0%	1166.3722	1166.2761	1	4.487	93.8%	4	R.LENEIQTYR.S	2
*	PARC_hx_14_02_itms.07869.07869.2	3.798	0.3981	100.0%	1262.8522	1263.3066	1	7.448	80.8%	2	R.SLLEGEGSSGGGGR.G	2

Similarities: contaminant_KERATIN02(2:36)
contaminant_KERATIN05(5:33)
contaminant_KERATIN08(5:33)
contaminant_KERATIN12(5:33)
contaminant_KERATIN07(4:34)
contaminant_KERATIN04(2:36)
contaminant_KERATIN10(4:34)

YOR106W

148

44.2%

283

32498

7.0

VAM3 SGDID:S000005632, Chr XV from 519121-519972, Verified ORF, "Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in vacuolar protein trafficking; member of the syntaxin family of proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10934.10934.2	3.8902	0.3562	100.0%	1259.0122	1259.358	1	6.341	80.0%	1	M.SFFDIEAQSSK.G	2
*	PARC_hx_14_02_itms.09772.09772.2	3.5036	0.156	98.9%	1172.3121	1172.2799	1	6.636	88.9%	1	S.FFDIEAQSSK.G	2
*	PARC_hx_14_02_itms.07172.07172.2	4.8378	0.3227	100.0%	1593.3522	1593.65	1	5.826	69.2%	7	K.GNSQQEPQFSTNQK.T	2
*	PARC_hx_14_05_itms.15987.15987.2	5.3557	0.3302	100.0%	1638.2522	1637.7869	1	7.379	80.8%	73	K.ELSNLIETFAEQSR.V	2
*	PARC_hx_14_03_itms.11849.11849.2	4.1324	0.3622	100.0%	1396.3922	1395.512	1	7.315	81.8%	1	L.SNLIETFAEQSR.V	2
*	PARC_hx_14_02_itms.09495.09495.2	4.5751	0.2945	100.0%	1534.1522	1532.7002	1	5.752	83.3%	7	K.IETELIPNCTSVR.D	2
*	PARC_hx_14_05_itms.09692.09692.2	3.8881	0.1668	100.0%	1611.6721	1609.8229	1	4.627	65.4%	34	R.DKIESNILIHQNGK.L	2
*	PARC_hx_14_04_itms.08303.08303.2	4.4449	0.3748	100.0%	1366.6322	1366.5602	1	6.544	86.4%	4	K.IESNILIHQNGK.L	2
*	PARC_hx_14_03_itms.07781.07781.2	3.6027	0.2091	100.0%	1416.5322	1415.5051	1	5.188	85.0%	6	K.YQSLQQSYNQR.K	2
*	PARC_hx_14_03_itms.06974.06974.2	2.277	0.0843	99.3%	887.9322	888.0086	4	3.287	68.8%	4	K.TPISPGTSK.E	2
*	PARC_hx_14_03_itms.08950.08950.2	3.3337	0.2408	100.0%	1824.7722	1823.9977	1	4.983	60.0%	1	R.TEAVRQDPESSYISIK.V	2
*	PARC_hx_14_02_itms.08930.08930.2	2.4857	0.2252	99.7%	1267.6122	1267.3782	3	4.531	65.0%	3	R.QDPESSYISIK.V	2
*	PARC_hx_14_02_itms.08828.08828.1	1.9728	0.0696	95.7%	1268.59	1267.3782	129	3.571	50.0%	2	R.QDPESSYISIK.V	1
*	PARC_hx_14_02_itms.08556.08556.2	2.9263	0.326	100.0%	1024.4722	1024.1589	1	5.236	87.5%	2	D.PESSYISIK.V	2
*	PARC_hx_14_03_itms.07994.07994.2	2.8953	0.263	97.9%	1602.7722	1602.7037	1	5.617	69.2%	1	K.VNEQSPLLHNEGQH.Q	2
*	PARC_hx_14_03_itms.07611.07611.2	2.7995	0.2369	98.9%	1010.8122	1011.1228	3	4.519	81.2%	1	R.IHTAVQEVN.A	2

contaminant_KERATIN13

133

43.7%

643

65494

6.6

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12369.12369.2	4.815	0.3215	100.0%	1967.7722	1965.2542	1	6.495	68.8%	5	N.QSLLQPLNVEIDPEIQK.V	2
*	PARC_hx_14_05_itms.14409.14409.2	4.7704	0.3073	100.0%	1838.7722	1837.1234	1	7.577	66.7%	4	Q.SLLQPLNVEIDPEIQK.V	2
*	PARC_hx_14_03_itms.11184.11184.2	2.5001	0.2687	98.2%	1636.7322	1636.8859	1	5.209	53.8%	1	L.LQPLNVEIDPEIQK.V	2
*	PARC_hx_14_02_itms.08378.08378.2	2.662	0.2015	98.2%	1185.4922	1185.3196	19	3.982	66.7%	1	L.NVEIDPEIQK.V	2
*	PARC_hx_14_05_itms.12872.12872.2	4.189	0.2728	100.0%	1383.5122	1384.5315	1	6.37	77.3%	22	K.SLNNQFASFIDK.V	2
	PARC_hx_14_03_itms.08870.08870.2	4.7112	0.0148	99.9%	1476.2122	1476.6726	1	6.292	90.9%	3	R.FLEQQNQVLQTK.W	2 2
*	PARC_hx_14_02_itms.11510.11510.2	4.7116	0.4325	100.0%	1476.4521	1476.6293	1	7.088	90.9%	15	K.WELLQQVDTSTR.T	2
*	PARC_hx_14_02_itms.08464.08464.2	3.4016	0.2307	98.7%	1290.5922	1290.416	1	4.53	80.0%	1	W.ELLQQVDTSTR.T	2
*	PARC_hx_14_04_itms.11684.11684.2	2.882	0.2224	97.9%	1385.3922	1384.4875	1	5.037	70.0%	2	R.THNLEPYFESF.I	2
*	PARC_hx_14_02_itms.09530.09530.2	3.707	0.3571	100.0%	1300.9122	1301.4316	1	6.626	83.3%	6	K.NMQDMVEDYR.N	2
	PARC_hx_14_04_itms.05432.05432.2	2.8903	0.0171	99.6%	1309.3722	1309.4215	5	3.906	72.2%	7	R.NKYEDEINKR.T	2 2 2 2
*	PARC_hx_14_02_itms.09044.09044.1	2.1931	0.0681	96.8%	1265.73	1266.3934	5	3.35	65.0%	1	R.TNAENEFVTIK.K	1
*	PARC_hx_14_02_itms.09092.09092.2	3.951	0.3483	100.0%	1265.9922	1266.3934	1	6.612	85.0%	6	R.TNAENEFVTIK.K	2
*	PARC_hx_14_03_itms.08568.08568.2	3.2989	0.2885	100.0%	1394.8722	1394.5675	1	5.442	63.6%	3	R.TNAENEFVTIKK.D	2
*	PARC_hx_14_02_itms.15237.15237.2	2.9677	0.3013	98.7%	1520.3722	1520.6793	1	6.338	66.7%	1	K.LDNLQQEIDFLTA.L	2
*	PARC_hx_14_02_itms.18015.18015.2	3.5103	0.3501	100.0%	1633.4922	1633.8389	1	6.334	73.1%	1	K.LDNLQQEIDFLTAL.Y	2
*	PARC_hx_14_02_itms.18563.18563.2	3.9482	0.4372	100.0%	1797.0322	1797.0148	1	7.835	67.9%	1	K.LDNLQQEIDFLTALY.Q	2
*	PARC_hx_14_03_itms.10822.10822.2	3.6656	0.3947	100.0%	1963.7922	1964.1577	1	6.668	53.1%	1	M.QTQISETNVILSMDNNR.Q	2
*	PARC_hx_14_03_itms.10442.10442.2	3.894	0.2987	100.0%	1606.8522	1606.7913	1	6.521	73.1%	1	Q.ISETNVILSMDNNR.Q	2
*	PARC_hx_14_02_itms.06860.06860.2	3.5851	0.3744	100.0%	1126.1122	1126.2084	1	6.54	88.9%	2	K.AEAESLYQSK.Y	2
*	PARC_hx_14_02_itms.08841.08841.1	2.8502	0.3002	100.0%	1179.58	1180.303	3	4.874	72.2%	3	K.YEELQITAGR.H	1
*	PARC_hx_14_02_itms.08858.08858.2	3.8017	0.1929	100.0%	1179.9722	1180.303	1	6.12	94.4%	7	K.YEELQITAGR.H	2
	PARC_hx_14_02_itms.08738.08738.1	1.9528	0.1137	98.1%	973.58	974.102	9	4.088	64.3%	1	K.IEISELNR.V	1 1
	PARC_hx_14_02_itms.08711.08711.2	3.2562	0.1419	100.0%	977.0522	974.102	8	3.921	92.9%	3	K.IEISELNR.V	2 2
*	PARC_hx_14_05_itms.05135.05135.2	2.4209	0.0646	99.3%	1202.3722	1202.3964	59	3.606	66.7%	1	R.LRSEIDNVKK.Q	2
*	PARC_hx_14_02_itms.06045.06045.1	2.2534	0.109	100.0%	804.62	804.8754	3	3.37	75.0%	1	R.SEIDNVK.K	1
*	PARC_hx_14_02_itms.09398.09398.2	5.162	0.4354	100.0%	1716.9922	1717.8333	1	8.754	78.6%	10	K.QISNLQQSISDAEQR.G	2
*	PARC_hx_14_02_itms.10119.10119.1	2.9148	0.3093	100.0%	1357.65	1358.4912	1	6.432	59.1%	2	K.LNDLEDALQQAK.E	1
*	PARC_hx_14_02_itms.10160.10160.2	5.4036	0.2834	100.0%	1358.8121	1358.4912	1	6.831	90.9%	6	K.LNDLEDALQQAK.E	2
*	PARC_hx_14_02_itms.08643.08643.2	3.1454	0.2372	100.0%	1142.1921	1142.2689	1	5.356	87.5%	2	R.DYQELMNTK.L	2
*	PARC_hx_14_02_itms.08655.08655.1	2.9989	0.222	100.0%	1142.42	1142.2689	2	5.429	75.0%	1	R.DYQELMNTK.L	1
*	PARC_hx_14_02_itms.07808.07808.2	2.7344	0.0631	99.7%	1033.9321	1034.1112	3	3.899	81.2%	2	R.TLLEGEESR.M	2
*	PARC_hx_14_02_itms.07787.07787.1	2.4955	0.1544	100.0%	1035.56	1034.1112	1	5.322	62.5%	3	R.TLLEGEESR.M	1
*	PARC_hx_14_03_itms.07604.07604.2	5.584	0.3082	100.0%	2384.6921	2385.298	1	10.372	40.0%	2	R.GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR.G	2
*	PARC_hx_14_03_itms.07625.07625.2	3.0262	0.333	100.0%	2442.6921	2442.35	3	5.843	25.8%	1	R.GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRG.S	2
*	PARC_hx_14_04_itms.07718.07718.3	3.8705	0.2919	100.0%	3313.8542	3314.2085	1	5.435	19.7%	3	R.GSYGSGGGSYGSGGSSYGSGGGGGGHGSYGSGSSSGGYR.G	3
*	PARC_hx_14_05_itms.05554.05554.2	2.4596	0.3364	97.8%	1587.4521	1587.562	1	7.212	50.0%	1	G.GGGGHGSYGSGSSSGGYR.G	2

Similarities: contaminant_KERATIN21(1:36)
contaminant_KERATIN22(3:34)
contaminant_KERATIN17(1:36)
contaminant_KERATIN20(1:36)

contaminant_KERATIN21

43.4%

357

39219

5.2

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08433.08433.2	1.7839	0.1603	99.2%	1017.6122	1017.1271	1	4.72	81.2%	1	R.QLDSIVGER.G	2 2 2
*	PARC_hx_14_03_itms.11900.11900.2	3.5471	0.2978	100.0%	1182.3722	1182.3337	1	6.857	83.3%	3	R.GMQDLVEDFK.N	2
	PARC_hx_14_04_itms.05432.05432.2	2.8903	0.0171	99.6%	1309.3722	1309.4215	5	3.906	72.2%	7	K.NKYEDEINKR.T	2 2 2 2
	PARC_hx_14_02_itms.09284.09284.2	2.6485	0.2412	99.9%	1223.0521	1223.3684	44	5.33	60.0%	1	R.TAAENEFVTLK.K	2 2
	PARC_hx_14_03_itms.12915.12915.2	3.6503	0.2646	100.0%	1408.5322	1408.551	1	5.232	77.3%	5	K.ADTLTDEINFLR.A	2 2
	PARC_hx_14_04_itms.13581.13581.1	2.7815	0.2283	100.0%	1329.67	1330.5211	1	5.307	59.1%	4	R.NLDLDSIIAEVK.A	1 1 1 1
	PARC_hx_14_03_itms.14360.14360.2	4.7038	0.2463	100.0%	1330.2522	1330.5211	1	6.771	90.9%	12	R.NLDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_04_itms.13606.13606.2	4.2661	0.0029	97.5%	1216.5122	1216.4174	1	6.337	85.0%	1	N.LDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_02_itms.07160.07160.2	3.1955	0.1889	100.0%	1108.0122	1108.196	1	5.082	87.5%	2	K.AQYEEIAQR.S	2 2 2 2
	PARC_hx_14_02_itms.08336.08336.2	3.6744	0.3317	100.0%	1213.5122	1213.2891	1	6.88	83.3%	1	R.AEAESWYQTK.Y	2 2
	PARC_hx_14_02_itms.08222.08222.2	3.803	0.4291	100.0%	1166.3322	1166.2761	1	7.41	94.4%	1	K.YEELQVTAGR.H	2 2
	PARC_hx_14_03_itms.10114.10114.2	3.5113	0.4255	100.0%	1659.2122	1659.7625	1	7.494	57.1%	1	K.QCANLQAAIADAEQR.G	2 2
	PARC_hx_14_02_itms.09551.09551.2	3.1931	0.2989	100.0%	1116.0922	1116.2566	1	5.123	88.9%	1	K.LEGLEDALQK.A	2 2
	PARC_hx_14_02_itms.08895.08895.2	2.7944	0.1747	99.9%	1154.4321	1154.3234	5	4.449	81.2%	1	K.EYQELMNVK.L	2 2 2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2
*	PARC_hx_14_03_itms.08794.08794.2	2.1985	0.0447	98.5%	1448.9722	1448.6163	8	3.319	43.8%	2	R.AIGGGLSSVGGGSSTIK.Y	2

contaminant_KERATIN22

41.1%

645

65865

8.0

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.07964.07964.2	4.7496	0.4096	100.0%	1255.0721	1255.3298	1	7.644	88.5%	2	R.GFSSGSAVVSGGSR.R	2
*	PARC_hx_14_03_itms.08270.08270.2	3.3548	0.419	100.0%	1131.8722	1132.1816	1	7.037	88.9%	1	R.STSSFSCLSR.H	2
*	PARC_hx_14_03_itms.08614.08614.2	2.2146	0.0598	99.0%	832.4322	831.9878	3	4.368	81.2%	1	R.SLVGLGGTK.S	2
*	PARC_hx_14_03_itms.08604.08604.1	2.3449	0.3195	100.0%	832.69	831.9878	1	5.444	68.8%	2	R.SLVGLGGTK.S	1
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_03_itms.08870.08870.2	4.7112	0.0148	99.9%	1476.2122	1476.6726	1	6.292	90.9%	3	R.FLEQQNQVLQTK.W	2 2
*	PARC_hx_14_02_itms.08882.08882.1	1.564	0.1229	95.5%	1037.55	1038.1454	77	4.289	50.0%	1	R.YLDGLTAER.T	1
*	PARC_hx_14_02_itms.08877.08877.2	3.3183	0.2281	100.0%	1038.2322	1038.1454	1	6.024	93.8%	2	R.YLDGLTAER.T	2
*	PARC_hx_14_03_itms.11966.11966.2	5.6518	0.4715	100.0%	2128.4321	2129.2598	1	8.899	73.5%	4	R.TSQNSELNNMQDLVEDYK.K	2
*	PARC_hx_14_02_itms.09191.09191.1	2.6043	0.2821	100.0%	1208.67	1209.3416	1	5.278	65.0%	1	R.TAAENDFVTLK.K	1
*	PARC_hx_14_02_itms.09230.09230.2	3.3086	0.3539	100.0%	1209.2722	1209.3416	1	5.955	80.0%	2	R.TAAENDFVTLK.K	2
*	PARC_hx_14_02_itms.08600.08600.1	2.4601	0.1711	100.0%	1068.53	1069.2177	1	5.314	75.0%	1	K.DVDNAYMIK.V	1
*	PARC_hx_14_02_itms.08594.08594.2	2.8626	0.2722	100.0%	1068.8322	1069.2177	1	5.846	81.2%	1	K.DVDNAYMIK.V	2
*	PARC_hx_14_03_itms.14060.14060.2	4.7885	0.0593	100.0%	1460.9521	1461.6982	1	5.693	86.4%	11	K.VDLLNQEIEFLK.V	2
	PARC_hx_14_04_itms.13581.13581.1	2.7815	0.2283	100.0%	1329.67	1330.5211	1	5.307	59.1%	4	R.NLDLDSIIAEVK.A	1 1 1 1
	PARC_hx_14_03_itms.14360.14360.2	4.7038	0.2463	100.0%	1330.2522	1330.5211	1	6.771	90.9%	12	R.NLDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_04_itms.13606.13606.2	4.2661	0.0029	97.5%	1216.5122	1216.4174	1	6.337	85.0%	1	N.LDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_02_itms.07160.07160.2	3.1955	0.1889	100.0%	1108.0122	1108.196	1	5.082	87.5%	2	K.AQYEEIAQR.S	2 2 2 2
*	PARC_hx_14_03_itms.08918.08918.2	3.9741	0.288	100.0%	1194.4321	1194.33	1	6.607	94.4%	5	K.YEELQVTVGR.H	2
	PARC_hx_14_02_itms.08738.08738.1	1.9528	0.1137	98.1%	973.58	974.102	9	4.088	64.3%	1	K.IEISELNR.V	1 1
	PARC_hx_14_02_itms.08711.08711.2	3.2562	0.1419	100.0%	977.0522	974.102	8	3.921	92.9%	3	K.IEISELNR.V	2 2
*	PARC_hx_14_04_itms.07005.07005.2	2.5288	0.2545	100.0%	995.03217	995.16675	1	4.562	87.5%	5	R.LQGEIAHVK.K	2
*	PARC_hx_14_02_itms.08756.08756.2	4.3976	0.3436	100.0%	1330.1322	1330.3971	1	7.753	86.4%	2	K.NVQDAIADAEQR.G	2
*	PARC_hx_14_03_itms.10641.10641.2	5.3564	0.2375	100.0%	1371.9321	1372.5181	1	6.01	86.4%	5	K.LNDLEEALQQAK.E	2
	PARC_hx_14_02_itms.09465.09465.1	2.8646	0.2609	100.0%	1139.66	1140.2965	9	5.558	68.8%	1	R.DYQELMNVK.L	1 1 1
	PARC_hx_14_02_itms.09446.09446.2	3.2471	0.2069	100.0%	1140.3322	1140.2965	1	5.609	81.2%	2	R.DYQELMNVK.L	2 2 2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2
*	PARC_hx_14_03_itms.07930.07930.2	4.1115	0.4475	100.0%	2502.5122	2502.4893	1	8.259	33.9%	1	K.AAFGGSGGRGSSSGGGYSSGSSSYGSGGR.Q	2
*	PARC_hx_14_04_itms.05405.05405.3	4.5012	0.3269	100.0%	2316.0544	2315.2913	1	7.041	37.0%	1	K.HSSGGGSRGGSSSGGGYGSGGGGSSSVK.G	3
*	PARC_hx_14_04_itms.05400.05400.2	2.165	0.0127	98.1%	2316.5723	2315.2913	10	5.213	29.6%	1	K.HSSGGGSRGGSSSGGGYGSGGGGSSSVK.G	2

YKL196C

40.0%

200

22707

5.7

YKT6 SGDID:S000001679, Chr XI from 75539-74937, reverse complement, Verified ORF, "Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08582.08582.2	3.0217	0.1244	99.9%	889.1122	889.0367	1	4.207	92.9%	1	K.ALELSEVK.D	2
*	PARC_hx_14_04_itms.12704.12704.2	3.6807	0.3928	100.0%	1246.4922	1246.3647	1	7.437	83.3%	4	K.DLSQFGFFER.S	2
*	PARC_hx_14_02_itms.10042.10042.2	3.9692	0.3555	100.0%	1292.2522	1292.4382	1	6.599	86.4%	1	R.SEGICGVLITDK.E	2
*	PARC_hx_14_02_itms.09692.09692.2	4.7974	0.4024	100.0%	1621.3522	1621.6978	1	6.697	88.5%	2	K.EEWADVTETNDALK.M	2
*	PARC_hx_14_02_itms.08198.08198.2	1.8867	0.0155	98.2%	968.2922	968.0947	324	3.29	71.4%	1	K.QLDTYISK.Y	2
*	PARC_hx_14_02_itms.08211.08211.2	2.7635	0.3072	100.0%	1367.0922	1367.5164	2	5.187	77.3%	1	K.YQDPSQADAIMK.V	2
*	PARC_hx_14_03_itms.09022.09022.2	2.5399	0.2695	99.9%	1707.6122	1707.8755	3	5.937	50.0%	1	K.LDNLVDKSESLTASSK.M	2

YER178W

39.8%

420

46343

8.1

PDA1 SGDID:S000000980, Chr V from 546812-548074, Verified ORF, "E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA, regulated by glucose"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12048.12048.2	3.2094	0.186	98.1%	2671.1921	2671.828	11	3.975	34.8%	1	K.KAPEDIEGSDTVQIELPESSFESY.M	2
*	PARC_hx_14_03_itms.10325.10325.1	1.7072	0.082	95.8%	967.47	968.1993	108	3.435	64.3%	1	K.ATLLQMYK.D	1
*	PARC_hx_14_03_itms.10322.10322.2	2.8415	0.2438	100.0%	968.77216	968.1993	1	5.265	92.9%	1	K.ATLLQMYK.D	2
*	PARC_hx_14_02_itms.09442.09442.2	2.8922	0.0344	99.7%	1068.8121	1068.2151	8	3.569	81.2%	1	K.LDSIITSYR.C	2
*	PARC_hx_14_03_itms.11265.11265.2	2.7172	0.213	100.0%	960.09216	960.1797	1	5.732	81.2%	1	K.AVLAELMGR.R	2
*	PARC_hx_14_05_itms.12923.12923.2	4.2838	0.4579	100.0%	2265.2322	2265.459	1	8.33	50.0%	1	F.TLYGDGASNQGQVFESFNMAK.L	2
*	PARC_hx_14_02_itms.09359.09359.1	1.7991	0.1409	98.0%	1063.41	1064.1981	11	4.412	56.2%	1	R.SSAMTEYFK.R	1
*	PARC_hx_14_02_itms.09344.09344.2	2.7189	0.2057	99.9%	1063.9722	1064.1981	2	5.105	81.2%	1	R.SSAMTEYFK.R	2
*	PARC_hx_14_03_itms.09117.09117.1	2.4834	0.1741	100.0%	875.51	876.0434	11	4.994	71.4%	1	R.GQYIPGLK.V	1
*	PARC_hx_14_05_itms.13802.13802.2	4.8752	0.4282	100.0%	1510.6522	1509.7607	1	9.188	76.9%	5	K.VNGMDILAVYQASK.F	2
*	PARC_hx_14_02_itms.08753.08753.1	2.2797	0.2189	100.0%	866.55	865.9275	15	4.561	75.0%	1	K.DWCLSGK.G	1
*	PARC_hx_14_03_itms.11036.11036.2	4.1716	0.3782	100.0%	1340.3522	1340.5187	1	6.815	80.0%	3	K.GPLVLEYETYR.Y	2
*	PARC_hx_14_02_itms.08250.08250.1	1.5718	0.1217	96.8%	827.4	827.956	34	4.206	64.3%	1	K.NDPIAGLK.M	1
*	PARC_hx_14_03_itms.09017.09017.2	6.2251	0.475	100.0%	2073.7722	2071.2915	1	8.364	72.2%	8	R.KYVDEQVELADAAPPPEAK.L	2
*	PARC_hx_14_02_itms.09040.09040.2	3.5974	0.4329	100.0%	1942.8322	1943.1174	1	7.188	55.9%	1	K.YVDEQVELADAAPPPEAK.L	2
*	PARC_hx_14_05_itms.15032.15032.2	3.9022	0.1549	100.0%	1329.0122	1326.5756	1	4.623	90.0%	5	K.LSILFEDVYVK.G	2
*	PARC_hx_14_02_itms.10241.10241.2	2.5373	0.2706	100.0%	1151.3722	1151.261	2	4.85	87.5%	2	R.IPEDTWDFK.K	2

contaminant_KERATIN18

39.1%

562

59822

8.0

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08705.08705.2	3.27	0.4793	100.0%	1026.6322	1027.1222	1	7.112	83.3%	2	R.SGFSSISVSR.S	2
*	PARC_hx_14_04_itms.07923.07923.2	3.6584	0.3643	100.0%	1425.4122	1425.4668	1	8.316	53.1%	1	R.GSGGLGGACGGAGFGSR.S	2
*	PARC_hx_14_03_itms.08846.08846.1	1.5743	0.1547	98.2%	881.51	882.0043	27	3.601	50.0%	1	R.SLYGLGGSK.R	1
*	PARC_hx_14_05_itms.09920.09920.2	4.9018	0.5019	100.0%	1600.5721	1599.7069	1	9.157	62.5%	3	R.ISIGGGSCAISGGYGSR.A	2
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_03_itms.10232.10232.2	3.4621	0.1309	100.0%	1203.9521	1204.3684	1	5.518	88.9%	2	K.WTLLQEQGTK.T	2 2
	PARC_hx_14_02_itms.08433.08433.2	1.7839	0.1603	99.2%	1017.6122	1017.1271	1	4.72	81.2%	1	R.QLDSIVGER.G	2 2 2
*	PARC_hx_14_03_itms.11645.11645.2	2.8561	0.122	99.8%	1204.6921	1205.3685	25	3.774	72.2%	1	R.NMQDLVEDLK.N	2
	PARC_hx_14_02_itms.09284.09284.2	2.6485	0.2412	99.9%	1223.0521	1223.3684	44	5.33	60.0%	1	R.TAAENEFVTLK.K	2 2
	PARC_hx_14_03_itms.12915.12915.2	3.6503	0.2646	100.0%	1408.5322	1408.551	1	5.232	77.3%	5	K.ADTLTDEINFLR.A	2 2
	PARC_hx_14_04_itms.13581.13581.1	2.7815	0.2283	100.0%	1329.67	1330.5211	1	5.307	59.1%	4	R.NLDLDSIIAEVK.A	1 1 1 1
	PARC_hx_14_03_itms.14360.14360.2	4.7038	0.2463	100.0%	1330.2522	1330.5211	1	6.771	90.9%	12	R.NLDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_04_itms.13606.13606.2	4.2661	0.0029	97.5%	1216.5122	1216.4174	1	6.337	85.0%	1	N.LDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_02_itms.07160.07160.2	3.1955	0.1889	100.0%	1108.0122	1108.196	1	5.082	87.5%	2	K.AQYEEIAQR.S	2 2 2 2
	PARC_hx_14_02_itms.08336.08336.2	3.6744	0.3317	100.0%	1213.5122	1213.2891	1	6.88	83.3%	1	R.AEAESWYQTK.Y	2 2
	PARC_hx_14_02_itms.08222.08222.2	3.803	0.4291	100.0%	1166.3322	1166.2761	1	7.41	94.4%	1	K.YEELQVTAGR.H	2 2
	PARC_hx_14_03_itms.10114.10114.2	3.5113	0.4255	100.0%	1659.2122	1659.7625	1	7.494	57.1%	1	K.QCANLQAAIADAEQR.G	2 2
	PARC_hx_14_02_itms.09551.09551.2	3.1931	0.2989	100.0%	1116.0922	1116.2566	1	5.123	88.9%	1	K.LEGLEDALQK.A	2 2
	PARC_hx_14_02_itms.08895.08895.2	2.7944	0.1747	99.9%	1154.4321	1154.3234	5	4.449	81.2%	1	K.EYQELMNVK.L	2 2 2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2
*	PARC_hx_14_03_itms.07976.07976.2	4.2708	0.4821	100.0%	1436.7122	1436.562	1	8.195	68.8%	1	R.ATGGGLSSVGGGSSTIK.Y	2

Similarities: contaminant_KERATIN21(13:8)
contaminant_KERATIN22(6:15)
contaminant_KERATIN17(7:14)
contaminant_KERATIN14(2:19)
contaminant_KERATIN20(2:19)
contaminant_KERATIN15(2:19)
contaminant_KERATIN16(1:20)

YOL039W

36.8%

106

10746

4.0

RPP2A SGDID:S000005399, Chr XV from 254295-254615, Verified ORF, "Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08800.08800.2	3.7094	0.4113	100.0%	1399.1322	1399.587	1	7.013	65.4%	1	Y.LLLNAAGNTPDATK.I	2
*	PARC_hx_14_03_itms.11925.11925.2	4.4575	0.3114	100.0%	1545.8322	1545.727	1	7.287	73.1%	3	K.AILESVGIEIEDEK.V	2
*	PARC_hx_14_03_itms.11222.11222.2	3.0357	0.3142	100.0%	1091.8121	1090.2621	2	5.572	80.0%	2	K.VSSVLSALEGK.S	2

contaminant_KERATIN05

36.1%

471

51531

5.2

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08121.08121.2	3.9891	0.4109	100.0%	1107.0922	1107.2181	1	7.787	90.0%	1	R.ISSVLAGGSCR.A	2
	PARC_hx_14_02_itms.07904.07904.2	3.0068	0.2073	100.0%	1090.9922	1091.2273	2	5.017	93.8%	2	K.VTMQNLNDR.L	2 2 2
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
	PARC_hx_14_02_itms.08356.08356.1	2.3799	0.2501	100.0%	1301.64	1302.4241	3	5.376	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
	PARC_hx_14_02_itms.08423.08423.2	4.0735	0.3888	100.0%	1302.4321	1302.4241	1	7.703	81.8%	2	R.ALEEANADLEVK.I	2 2 2 2
	PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.T	1 1 1 1 1 1
	PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.T	2 2 2 2 2 2
*	PARC_hx_14_03_itms.09042.09042.2	2.6941	0.2218	99.9%	1268.4521	1267.4246	1	4.432	66.7%	3	R.TKYETELNLR.M	2
	PARC_hx_14_02_itms.09828.09828.2	2.4431	0.0555	99.2%	1207.3922	1205.3716	3	3.645	70.0%	2	R.MSVEADINGLR.R	2 2
	PARC_hx_14_02_itms.10118.10118.2	3.9459	0.2635	100.0%	1030.4122	1030.2096	1	5.89	93.8%	3	R.VLDELTLAR.A	2 2 2 2 2
	PARC_hx_14_03_itms.09670.09670.2	2.2894	0.0023	98.6%	1243.0322	1243.3367	25	4.259	61.1%	2	K.NHEEEMNALR.G	2 2
*	PARC_hx_14_04_itms.09663.09663.2	5.5094	0.259	100.0%	2087.8123	2087.269	1	8.874	65.0%	4	R.GQVGGDVNVEMDAAPGVDLSR.I	2
*	PARC_hx_14_02_itms.12369.12369.1	2.848	0.1816	100.0%	1172.44	1173.2671	3	5.966	62.5%	1	K.DAEEWFFTK.T	1
*	PARC_hx_14_02_itms.12422.12422.2	3.7114	0.3068	100.0%	1172.9922	1173.2671	1	6.396	81.2%	2	K.DAEEWFFTK.T	2
	PARC_hx_14_02_itms.08202.08202.2	3.5049	0.1667	100.0%	1224.0521	1221.3068	1	5.774	75.0%	2	K.ASLENSLEETK.G	2 2 2
	PARC_hx_14_03_itms.10974.10974.2	2.9056	0.1729	97.5%	1344.1721	1343.523	2	4.817	59.1%	1	M.IGSVEEQLAQLR.C	2 2 2
	PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.R	2 2 2 2 2 2
	PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.R	1 1 1 1 1 1
*	PARC_hx_14_05_itms.09838.09838.2	5.3511	0.5505	100.0%	2309.7522	2310.396	1	8.984	47.6%	1	R.LLEGEDAHLSSSQFSSGSQSSR.D	2

Similarities: contaminant_KERATIN02(2:18)
contaminant_KERATIN03(5:15)
contaminant_KERATIN08(12:8)
contaminant_KERATIN12(9:11)
contaminant_KERATIN07(10:10)
contaminant_KERATIN04(4:16)
contaminant_KERATIN10(8:12)

YMR197C

35.9%

217

24668

6.6

VTI1 SGDID:S000004810, Chr XIII from 659197-658544, reverse complement, Verified ORF, "Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08246.08246.2	4.2699	0.4402	100.0%	1455.4722	1455.6108	1	7.32	65.4%	5	K.ASLAEAPSQPLSQR.N	2
*	PARC_hx_14_04_itms.08576.08576.2	3.3378	0.4052	100.0%	1343.4122	1343.4825	1	6.588	86.4%	9	K.RPLQSLVDSGDR.D	2
*	PARC_hx_14_02_itms.10328.10328.2	5.2666	0.4151	100.0%	1696.4722	1693.7673	1	7.447	82.1%	9	R.LFGDLNASNIDDDQR.Q	2
*	PARC_hx_14_03_itms.13612.13612.3	3.178	0.3347	100.0%	2820.4143	2821.1963	1	5.794	24.0%	1	G.DRLKDASRIANETEGIGSQIMMDLR.S	3
*	PARC_hx_14_04_itms.12608.12608.2	5.7643	0.5226	100.0%	1880.2522	1879.1536	1	8.954	75.0%	14	R.IANETEGIGSQIMMDLR.S	2
*	PARC_hx_14_02_itms.09873.09873.2	3.7757	0.2155	100.0%	1418.3322	1415.5425	1	4.635	86.4%	5	R.QTLFQADSYVDK.S	2

contaminant_KERATIN08

35.6%

469

50499

5.0

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.07904.07904.2	3.0068	0.2073	100.0%	1090.9922	1091.2273	2	5.017	93.8%	2	K.VTMQNLNDR.L	2 2 2
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
	PARC_hx_14_02_itms.08356.08356.1	2.3799	0.2501	100.0%	1301.64	1302.4241	3	5.376	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
	PARC_hx_14_02_itms.08423.08423.2	4.0735	0.3888	100.0%	1302.4321	1302.4241	1	7.703	81.8%	2	R.ALEEANADLEVK.I	2 2 2 2
	PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.T	1 1 1 1 1 1
	PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.T	2 2 2 2 2 2
*	PARC_hx_14_02_itms.08223.08223.2	2.5575	0.1923	99.8%	1203.3121	1202.3097	1	4.35	75.0%	1	R.QTVEADVNGLR.R	2
	PARC_hx_14_02_itms.10118.10118.2	3.9459	0.2635	100.0%	1030.4122	1030.2096	1	5.89	93.8%	3	R.VLDELTLAR.T	2 2 2 2 2
	PARC_hx_14_02_itms.10984.10984.2	4.1138	0.3231	100.0%	1277.0122	1277.4755	2	5.651	85.0%	2	R.TDLEMQIEGLK.E	2 2
*	PARC_hx_14_03_itms.09776.09776.2	4.9877	0.455	100.0%	2088.672	2089.2415	1	9.031	52.5%	5	R.GQTGGDVNVEMDAAPGVDLSR.I	2
*	PARC_hx_14_02_itms.11714.11714.1	1.4945	0.1389	96.7%	1095.14	1097.2126	92	4.436	56.2%	1	R.DAETWFLSK.T	1
*	PARC_hx_14_02_itms.11686.11686.2	3.4259	0.2862	100.0%	1096.8322	1097.2126	1	6.142	81.2%	1	R.DAETWFLSK.T	2
	PARC_hx_14_02_itms.08202.08202.2	3.5049	0.1667	100.0%	1224.0521	1221.3068	1	5.774	75.0%	2	K.ASLENSLEETK.G	2 2 2
	PARC_hx_14_03_itms.10974.10974.2	2.9056	0.1729	97.5%	1344.1721	1343.523	2	4.817	59.1%	1	L.IGSVEEQLAQLR.C	2 2 2
*	PARC_hx_14_03_itms.12158.12158.2	6.201	0.4131	100.0%	2141.4722	2142.3516	1	9.005	78.1%	6	R.CEMEQQSQEYQILLDVK.T	2
	PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.R	2 2 2 2 2 2
	PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.R	1 1 1 1 1 1
*	PARC_hx_14_02_itms.08619.08619.2	4.9872	0.4424	100.0%	2021.3722	2021.1045	1	7.937	66.7%	1	R.LLEGEDAHLSSQQASGQSY.S	2
*	PARC_hx_14_03_itms.08388.08388.2	5.0839	0.4635	100.0%	2350.8323	2351.4485	1	9.063	50.0%	1	R.LLEGEDAHLSSQQASGQSYSSR.E	2

Similarities: contaminant_KERATIN02(2:18)
contaminant_KERATIN03(5:15)
contaminant_KERATIN05(12:8)
contaminant_KERATIN12(8:12)
contaminant_KERATIN07(10:10)
contaminant_KERATIN04(4:16)
contaminant_KERATIN10(8:12)

YBR080C

34.3%

758

84056

8.0

SEC18 SGDID:S000000284, Chr II from 400884-398608, reverse complement, Verified ORF, "ATPase required for the release of Sec17p during the 'priming' step in homotypic vacuole fusion and for ER to Golgi transport; homolog of the mammalian NSF"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.12256.12256.2	4.2001	0.3295	100.0%	1590.3322	1590.7355	1	7.644	69.2%	2	R.TWGGWSLNQDVQAK.A	2
*	PARC_hx_14_02_itms.09608.09608.2	3.4291	0.3899	100.0%	1423.7122	1423.5627	1	6.522	75.0%	1	K.AVSTVFDQDELAK.Q	2
*	PARC_hx_14_03_itms.12286.12286.2	6.2128	0.5349	100.0%	2345.5723	2343.5933	1	9.679	63.6%	6	R.NVQAIDLGDIEPTSAVATGIETK.G	2
*	PARC_hx_14_04_itms.08165.08165.2	2.8157	0.3028	100.0%	1147.1721	1147.3195	2	4.995	66.7%	1	R.SNAVIRPDFK.F	2
*	PARC_hx_14_02_itms.09726.09726.2	3.3935	0.2461	100.0%	1150.6322	1150.2737	1	5.415	85.0%	1	K.FEDLGVGGLDK.E	2
*	PARC_hx_14_03_itms.08938.08938.2	2.119	0.0306	98.5%	1069.8522	1070.2743	25	3.349	66.7%	1	K.IVNGPEILSK.Y	2
*	PARC_hx_14_03_itms.11907.11907.2	3.9119	0.2725	100.0%	1660.7322	1657.821	1	5.457	62.5%	4	R.GDGTGVGDNVVNQLLAK.M	2
*	PARC_hx_14_05_itms.16265.16265.2	3.0733	0.2682	100.0%	2004.0721	2004.327	11	5.507	38.2%	1	K.MDGVDQLNNILVIGMTNR.K	2
*	PARC_hx_14_03_itms.11512.11512.2	3.3095	0.2413	100.0%	1106.4122	1106.3073	6	5.139	87.5%	2	R.LQIFDIQTK.K	2
*	PARC_hx_14_04_itms.13377.13377.2	4.7209	0.4037	100.0%	2081.7722	2080.3328	1	8.534	61.1%	2	R.ENNMMSDDVNLAELAALTK.N	2
*	PARC_hx_14_03_itms.11014.11014.2	4.0717	0.2927	100.0%	1263.8121	1264.4209	1	6.039	81.8%	2	K.NFSGAEIEGLVK.S	2
*	PARC_hx_14_03_itms.07992.07992.2	2.8921	0.2388	100.0%	925.1722	925.02936	1	5.528	87.5%	1	K.SASSFAINK.T	2
*	PARC_hx_14_05_itms.17598.17598.2	4.1812	0.5045	100.0%	2436.5322	2438.6501	1	8.519	50.0%	5	R.EDFLNALNDVTPAFGISEEDLK.T	2
*	PARC_hx_14_03_itms.09887.09887.2	3.9627	0.3552	100.0%	1533.1522	1533.7207	1	6.807	70.8%	1	K.TCVEGGMMLYSER.V	2
*	PARC_hx_14_03_itms.09956.09956.2	3.555	0.2848	100.0%	1000.9122	1001.21136	1	6.034	94.4%	1	K.TALAAEIALK.S	2
*	PARC_hx_14_02_itms.09814.09814.2	3.8604	0.3119	100.0%	1563.3522	1563.7632	1	6.307	64.3%	3	R.LISPNELSGMSESAK.I	2
*	PARC_hx_14_03_itms.09846.09846.2	2.9567	0.273	100.0%	1112.7922	1113.2584	1	5.405	81.2%	1	K.IAYIDNTFR.D	2
*	PARC_hx_14_02_itms.07979.07979.2	2.3885	0.1789	99.8%	1019.3122	1019.14294	1	4.438	81.2%	1	K.TLTNIETAR.H	2
*	PARC_hx_14_05_itms.18950.18950.2	3.7491	0.188	100.0%	1927.1122	1928.0779	1	5.944	59.4%	3	R.HDEDPVNELVELMTQSA.-	2

contaminant_KERATIN17

32.0%

590

62461

8.1

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08904.08904.2	3.9242	0.4233	100.0%	1410.7922	1411.5547	1	7.191	73.1%	1	R.SFSTASAITPSVSR.T	2
*	PARC_hx_14_03_itms.08776.08776.2	4.5084	0.4916	100.0%	1410.8322	1411.5236	1	9.332	78.6%	1	R.VSLAGACGVGGYGSR.S	2
*	PARC_hx_14_03_itms.08795.08795.2	2.4566	0.1091	99.7%	940.53217	939.0562	8	3.658	81.2%	1	R.SLYNLGGSK.R	2
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_03_itms.10232.10232.2	3.4621	0.1309	100.0%	1203.9521	1204.3684	1	5.518	88.9%	2	K.WTLLQEQGTK.T	2 2
	PARC_hx_14_02_itms.08433.08433.2	1.7839	0.1603	99.2%	1017.6122	1017.1271	1	4.72	81.2%	1	R.QLDSIVGER.G	2 2 2
*	PARC_hx_14_03_itms.11950.11950.2	4.1254	0.0149	99.9%	1240.2322	1239.3856	2	5.816	88.9%	3	R.NMQDLVEDFK.N	2
	PARC_hx_14_04_itms.05432.05432.2	2.8903	0.0171	99.6%	1309.3722	1309.4215	5	3.906	72.2%	7	K.NKYEDEINKR.T	2 2 2 2
*	PARC_hx_14_02_itms.10376.10376.2	3.2884	0.3399	100.0%	1282.7522	1283.4822	1	6.926	80.0%	2	R.TTAENEFVMLK.K	2
*	PARC_hx_14_04_itms.12746.12746.2	4.7537	0.4657	100.0%	1426.6721	1426.6858	1	8.729	86.4%	4	K.VDALMDEINFMK.M	2
	PARC_hx_14_04_itms.13581.13581.1	2.7815	0.2283	100.0%	1329.67	1330.5211	1	5.307	59.1%	4	R.NLDLDSIIAEVK.A	1 1 1 1
	PARC_hx_14_03_itms.14360.14360.2	4.7038	0.2463	100.0%	1330.2522	1330.5211	1	6.771	90.9%	12	R.NLDLDSIIAEVK.A	2 2 2 2
	PARC_hx_14_04_itms.13606.13606.2	4.2661	0.0029	97.5%	1216.5122	1216.4174	1	6.337	85.0%	1	N.LDLDSIIAEVK.A	2 2 2 2
*	PARC_hx_14_02_itms.08376.08376.2	3.0051	0.2701	100.0%	1243.2322	1243.3153	1	5.579	83.3%	2	R.TEAESWYQTK.Y	2
*	PARC_hx_14_03_itms.08981.08981.2	3.0158	0.1107	99.8%	1197.4922	1195.2743	31	3.699	66.7%	2	K.YEELQQTAGR.H	2
*	PARC_hx_14_02_itms.09766.09766.2	3.9404	0.4238	100.0%	1702.9122	1702.7875	1	7.719	53.6%	2	K.QCANLQNAIADAEQR.G	2
*	PARC_hx_14_02_itms.09566.09566.2	4.0549	0.28	100.0%	1143.8322	1144.3104	1	5.306	88.9%	1	K.LAELEEALQK.A	2
*	PARC_hx_14_02_itms.08199.08199.2	2.7111	0.2838	100.0%	1156.2922	1156.2959	1	5.096	87.5%	1	R.EYQELMNTK.L	2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2

Similarities: contaminant_KERATIN13(1:18)
contaminant_KERATIN21(6:13)
contaminant_KERATIN22(5:14)
contaminant_KERATIN18(7:12)
contaminant_KERATIN14(2:17)
contaminant_KERATIN20(2:17)
contaminant_KERATIN15(2:17)

YOR234C

31.8%

107

12168

11.1

RPL33B SGDID:S000005760, Chr XV from 779405-779387,778859-778555, reverse complement, Verified ORF, "Ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Ap and has similarity to rat L35a; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.08577.08577.2	2.2848	0.0721	99.2%	1097.9922	1098.2877	2	4.12	77.8%	1	R.VNNPNVSLIK.I	2 2
*	PARC_hx_14_03_itms.11001.11001.2	3.227	0.3876	100.0%	1752.8322	1751.9768	1	6.976	60.0%	1	K.IEGVATPQEAQFYLGK.R	2
	PARC_hx_14_02_itms.12932.12932.1	1.7643	0.0928	95.5%	966.48	967.1528	52	2.87	64.3%	1	R.IFLYPSNI.-	1 1

Similarities: YPL143W(2:1)

YPL143W

31.8%

107

12154

11.1

RPL33A SGDID:S000006064, Chr XVI from 282121-282139,282665-282969, Verified ORF, "N-terminally acetylated ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Bp and has similarity to rat L35a; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.08577.08577.2	2.2848	0.0721	99.2%	1097.9922	1098.2877	2	4.12	77.8%	1	R.VNNPNVSLIK.I	2 2
*	PARC_hx_14_03_itms.10928.10928.2	3.2865	0.4026	100.0%	1737.4122	1737.95	1	7.414	53.3%	2	K.IEGVATPQDAQFYLGK.R	2
	PARC_hx_14_02_itms.12932.12932.1	1.7643	0.0928	95.5%	966.48	967.1528	52	2.87	64.3%	1	R.IFLYPSNI.-	1 1

Similarities: YOR234C(2:1)

U	YMR194W	3	3	31.0%	100	11124	11.6	RPL36A SGDID:S000004807, Chr XIII from 651144-651159,651623-651909, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Bp and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA"
U	YPL249C-A	3	3	31.0%	100	11135	11.6	RPL36B SGDID:S000006438, Chr XVI from 76239-76224,75985-75699, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.09048.09048.2	3.1312	0.1813	100.0%	887.0522	887.0672	2	5.194	93.8%	1	K.TGIAIGLNK.G	2
PARC_hx_14_02_itms.09027.09027.2	2.7143	0.1702	99.7%	1135.4922	1135.2621	8	4.122	66.7%	1	R.EIAGLSPYER.R	2
PARC_hx_14_02_itms.09251.09251.2	4.2346	0.3713	100.0%	1347.7122	1347.5292	1	6.415	86.4%	1	K.VEEMNNIIAASR.R	2

YAL038W

29.6%

500

54545

7.7

CDC19 SGDID:S000000036, Chr I from 71787-73289, Verified ORF, "Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10018.10018.2	3.8897	0.3803	100.0%	1344.7122	1345.5388	1	8.167	79.2%	2	R.LTSLNVVAGSDLR.R	2
	PARC_hx_14_03_itms.09519.09519.2	2.8656	0.1427	99.8%	987.53217	987.1845	1	3.96	88.9%	1	R.TSIIGTIGPK.T	2
*	PARC_hx_14_03_itms.09574.09574.2	2.9841	0.2672	100.0%	1228.7922	1228.391	1	5.552	80.0%	2	K.TNNPETLVALR.K	2
*	PARC_hx_14_05_itms.13528.13528.2	3.7735	0.3055	100.0%	1726.9321	1725.9365	1	6.301	56.2%	2	K.GVNLPGTDVDLPALSEK.D	2
*	PARC_hx_14_03_itms.10937.10937.2	4.0223	0.3059	100.0%	1762.5922	1761.9292	1	6.155	60.7%	2	K.IENQQGVNNFDEILK.V	2
*	PARC_hx_14_05_itms.14547.14547.2	3.6555	0.4021	100.0%	1749.2722	1750.0453	1	5.979	62.5%	4	R.GDLGIEIPAPEVLAVQK.K	2
*	PARC_hx_14_05_itms.16064.16064.2	4.3974	0.3458	100.0%	2522.2922	2523.7378	1	7.34	52.1%	2	R.AEVSDVGNAILDGADCVMLSGETAK.G	2
*	PARC_hx_14_03_itms.09694.09694.2	3.0494	0.3014	100.0%	1317.0122	1316.5406	1	6.83	66.7%	1	K.AIIVLSTSGTTPR.L	2
*	PARC_hx_14_02_itms.09485.09485.2	3.4772	0.4059	100.0%	1520.0322	1519.5646	1	8.185	54.2%	1	K.EPVSDWTDDVEAR.I	2
*	PARC_hx_14_03_itms.08259.08259.2	2.351	0.0587	99.0%	1343.5521	1342.4514	3	4.116	53.8%	1	K.AGAGHSNTLQVSTV.-	2

U	YDR447C	3	3	28.7%	136	15803	10.5	RPS17B SGDID:S000002855, Chr IV from 1355543-1355541,1355226-1354819, reverse complement, Verified ORF, "Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Ap and has similarity to rat S17 ribosomal protein"
U	YML024W	3	3	28.7%	136	15788	10.5	RPS17A SGDID:S000004486, Chr XIII from 225889-225891,226290-226697, Verified ORF, "Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Bp and has similarity to rat S17 ribosomal protein"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.09864.09864.2	2.5584	0.0408	99.4%	1080.2922	1080.2261	37	3.641	68.8%	1	K.LTLDFQTNK.R	2
PARC_hx_14_02_itms.11338.11338.2	3.2216	0.3671	100.0%	1592.3722	1592.746	1	6.421	80.8%	1	K.DQYVPEVSALDLSR.S	2
PARC_hx_14_02_itms.09378.09378.2	3.8764	0.3261	100.0%	1704.3322	1703.8467	1	6.071	66.7%	1	R.SNGVLNVDNQTSDLVK.S	2

contaminant_KERATIN12

28.1%

431

47974

5.0

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.07622.07622.2	3.922	0.3493	100.0%	1035.3322	1035.1112	1	5.885	95.0%	1	R.LSGGLGAGSCR.L	2
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
*	PARC_hx_14_02_itms.08438.08438.2	4.2179	0.3822	100.0%	1346.5322	1346.4772	1	7.017	81.8%	1	R.ALEEANTELEVK.I	2
	PARC_hx_14_03_itms.09884.09884.2	3.0129	0.1294	98.2%	1056.8922	1056.2504	9	3.622	87.5%	1	N.ILLQIDNAR.L	2 2
	PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.T	1 1 1 1 1 1
	PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.T	2 2 2 2 2 2
	PARC_hx_14_02_itms.10118.10118.2	3.9459	0.2635	100.0%	1030.4122	1030.2096	1	5.89	93.8%	3	R.VLDELTLAR.A	2 2 2 2 2
	PARC_hx_14_03_itms.09670.09670.2	2.2894	0.0023	98.6%	1243.0322	1243.3367	25	4.259	61.1%	2	K.NHEEEMNALR.G	2 2
*	PARC_hx_14_02_itms.12542.12542.2	3.3778	0.3312	100.0%	1145.4321	1145.2133	1	6.585	81.2%	1	K.DAEDWFFSK.T	2
*	PARC_hx_14_02_itms.08163.08163.2	4.7783	0.459	100.0%	1404.0122	1404.4764	1	8.156	83.3%	1	K.ASLEGNLAETENR.Y	2
	PARC_hx_14_03_itms.10974.10974.2	2.9056	0.1729	97.5%	1344.1721	1343.523	2	4.817	59.1%	1	L.IGSVEEQLAQLR.C	2 2 2
	PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.R	2 2 2 2 2 2
	PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.R	1 1 1 1 1 1
*	PARC_hx_14_03_itms.09006.09006.2	3.2856	0.2935	100.0%	1517.5122	1517.6787	1	5.768	75.0%	1	R.LLEGEDAHLTQYK.K	2

YDR229W

26.3%

453

49976

5.0

IVY1 SGDID:S000002637, Chr IV from 924779-926140, Verified ORF, "Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09665.09665.2	2.6716	0.0441	99.1%	1774.6721	1773.8156	4	4.381	53.6%	1	R.VDWDNGNHFDVSPDR.Y	2
*	PARC_hx_14_05_itms.14302.14302.2	4.4942	0.4318	100.0%	2051.612	2052.2866	1	8.28	55.3%	1	R.ASSITSGTSTINDLQTLITK.R	2
*	PARC_hx_14_03_itms.10761.10761.2	3.1079	0.2917	100.0%	1261.0521	1261.4178	1	5.934	80.0%	3	K.ETQEALSTLLR.N	2
*	PARC_hx_14_02_itms.08649.08649.2	3.085	0.2507	100.0%	1212.3522	1212.3019	1	5.994	80.0%	1	R.NSNAYSDSLLK.T	2
*	PARC_hx_14_05_itms.19994.19994.2	4.8222	0.351	100.0%	2631.8123	2631.8523	1	7.269	50.0%	3	K.YFNDLLGDNLIDDIDEFELQTK.I	2
*	PARC_hx_14_02_itms.07942.07942.2	2.2051	0.1798	99.6%	991.5522	991.0892	1	4.788	81.2%	1	R.ESLSSLQAR.L	2
*	PARC_hx_14_02_itms.08351.08351.2	3.821	0.3239	100.0%	1231.4122	1230.3634	1	5.917	90.0%	1	R.AQVEISENIAR.K	2
*	PARC_hx_14_05_itms.16554.16554.2	3.7559	0.4047	100.0%	2140.5122	2140.2336	1	6.831	44.7%	1	K.GWSGGGLDELLCDADDPFSK.K	2
*	PARC_hx_14_03_itms.13888.13888.2	4.5378	0.3158	100.0%	1897.5922	1896.9685	1	7.657	55.9%	1	W.SGGGLDELLCDADDPFSK.K	2

U	YJL034W	12	34	25.4%	682	74468	4.9	KAR2 SGDID:S000003571, Chr X from 381243-383291, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p"
U	contaminant_GR78_YEAST	12	34	25.4%	682	74468	4.9	owl\|P16474\| 78 KD GLUCOSE REGULATED PROTEIN HOMOLOG PRECURSOR (GRP 78) (IMMUNOGLOBULIN...

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_02_itms.09968.09968.2	3.9161	0.5339	100.0%	1513.9122	1514.6317	1	8.74	83.3%	2	R.ITPSYVAFTDDER.L	2
PARC_hx_14_03_itms.10898.10898.2	5.6629	0.3278	100.0%	1673.6322	1673.8662	1	7.76	85.7%	5	K.NQVAANPQNTIFDIK.R	2
PARC_hx_14_02_itms.08657.08657.2	1.7575	0.2599	99.7%	1138.0322	1138.2627	107	4.715	55.6%	1	K.QIAEDYLGTK.V	2
PARC_hx_14_03_itms.11108.11108.2	5.2422	0.4339	100.0%	1649.6122	1646.881	1	7.945	83.3%	4	R.IVNEPTAAAIAYGLDK.S	2
PARC_hx_14_05_itms.16892.16892.2	4.8627	0.4352	100.0%	2024.5122	2024.2323	1	8.582	73.5%	3	R.IEIDSFVDGIDLSETLTR.A	2
PARC_hx_14_05_itms.15434.15434.2	3.513	0.2038	100.0%	1268.6921	1268.4521	5	4.315	77.8%	4	K.FEELNLDLFK.K	2
PARC_hx_14_02_itms.10236.10236.2	3.9747	0.4236	100.0%	1347.2522	1346.4802	1	7.86	87.5%	1	K.DVDDIVLVGGSTR.I	2
PARC_hx_14_03_itms.11793.11793.2	4.1847	0.2802	100.0%	1427.6322	1427.5969	1	5.133	77.3%	3	K.VQQLLESYFDGK.K	2
PARC_hx_14_05_itms.11942.11942.2	4.8365	0.4483	100.0%	1879.5521	1880.1664	1	8.182	71.9%	6	K.SQIFSTAVDNQPTVMIK.V	2
PARC_hx_14_04_itms.10223.10223.2	3.1458	0.3325	100.0%	1198.0521	1198.4075	2	5.03	75.0%	3	K.FELTGIPPAPR.G	2
PARC_hx_14_03_itms.07942.07942.2	1.9091	0.0233	98.2%	879.2322	879.044	3	3.49	78.6%	1	K.VAYPITSK.L	2
PARC_hx_14_02_itms.11547.11547.2	2.7787	0.3954	100.0%	3271.632	3272.1096	1	7.038	29.3%	1	K.LYGGADGSGAADYDDEDEDDDGDYFEHDEL.-	2

YBR221C

24.9%

366

40054

5.3

PDB1 SGDID:S000000425, Chr II from 666248-665148, reverse complement, Verified ORF, "E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved multi-protein complex found in mitochondria"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.09760.09760.2	3.9575	0.2883	100.0%	1449.3322	1449.5756	1	7.482	79.2%	1	R.EALNSAMAEELDR.D	2
*	PARC_hx_14_04_itms.13748.13748.2	6.6985	0.5051	100.0%	2149.5723	2147.3025	1	9.286	69.4%	14	R.DDDVFLIGEEVAQYNGAYK.V	2
*	PARC_hx_14_05_itms.16130.16130.2	4.9203	0.471	100.0%	2122.872	2123.454	1	9.006	55.0%	2	R.VVDTPITEYGFTGLAVGAALK.G	2
*	PARC_hx_14_02_itms.09587.09587.2	3.5771	0.3685	100.0%	1355.3121	1355.4875	1	6.515	77.3%	2	R.EGTDISIVTYTR.N	2
*	PARC_hx_14_03_itms.10418.10418.2	3.0579	0.1723	99.9%	1223.4321	1221.3989	3	4.429	85.0%	6	K.YGVSAEVINLR.S	2
*	PARC_hx_14_05_itms.14306.14306.2	4.5447	0.3146	100.0%	1722.6921	1722.9324	1	7.101	67.9%	8	K.ELEDFAFPDTPTIVK.A	2

YNL058C

24.4%

316

35046

7.2

YNL058C SGDID:S000005003, Chr XIV from 516714-515764, reverse complement, Uncharacterized ORF, "Protein of unknown function, localizes to the vacuole; potential Cdc28p substrate"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.13562.13562.2	4.2072	0.3961	100.0%	1742.1721	1740.994	1	7.301	71.4%	3	R.SLFISPTLQVSQYEK.S	2
*	PARC_hx_14_05_itms.21104.21104.2	3.7735	0.4105	100.0%	3323.8523	3325.4739	1	8.235	38.5%	1	K.DTNIFIDDPFLYVGTYLEEEEEEEEER.K	2
*	PARC_hx_14_04_itms.09879.09879.2	4.5468	0.4761	100.0%	2060.9321	2060.2688	1	7.494	67.5%	2	R.NQSSLGLIPVASATSNTSSPK.K	2
*	PARC_hx_14_05_itms.15100.15100.2	2.9333	0.271	100.0%	1563.7322	1563.7687	1	5.125	61.5%	2	R.QAPSMFLDDVLNGR.E	2

YAL030W

23.9%

117

13201

8.2

SNC1 SGDID:S000000028, Chr I from 87287-87388,87502-87753, Verified ORF, "Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12250.12250.2	4.7838	0.4312	100.0%	1762.8722	1762.9727	1	8.282	73.3%	3	R.TAELQAEIDDTVGIMR.D	2
*	PARC_hx_14_02_itms.08772.08772.2	3.242	0.3787	100.0%	1221.4521	1221.3556	1	6.404	77.3%	1	K.ADNLAVSAQGFK.R	2

YML001W

23.6%

208

23043

4.9

YPT7 SGDID:S000004460, Chr XIII from 267174-267800, Verified ORF, "GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.09464.09464.2	1.898	0.0043	97.6%	1059.1721	1058.2633	74	2.977	65.0%	1	K.VIILGDSGVGK.T	2
*	PARC_hx_14_03_itms.12568.12568.2	4.1446	0.4486	100.0%	1562.7922	1563.7074	1	7.791	80.8%	1	K.NAINVDTAFEEIAR.S	2
*	PARC_hx_14_03_itms.11814.11814.3	3.2483	0.2113	100.0%	2741.1543	2742.829	12	4.64	25.0%	1	R.SALQQNQADTEAFEDDYNDAINIR.L	3

U	YGR192C	6	10	23.5%	332	35747	7.0	TDH3 SGDID:S000003424, Chr VII from 883815-882817, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall "
U	YJR009C	6	10	23.5%	332	35847	7.0	TDH2 SGDID:S000003769, Chr X from 454595-453597, reverse complement, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall "

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.08747.08747.2	2.3067	0.227	99.9%	833.6722	833.96576	1	4.139	85.7%	1	R.VAINGFGR.I	2
PARC_hx_14_03_itms.09011.09011.2	3.9296	0.4222	100.0%	1821.6522	1821.0131	1	7.686	62.5%	1	K.IVSNASCTTNCLAPLAK.V	2
PARC_hx_14_03_itms.08024.08024.2	3.0141	0.2481	100.0%	1375.9521	1375.5217	15	5.21	57.1%	1	R.TASGNIIPSSTGAAK.A	2
PARC_hx_14_04_itms.11436.11436.2	4.0871	0.4122	100.0%	1470.8322	1471.7344	1	8.62	69.2%	4	R.VPTVDVSVVDLTVK.L	2
PARC_hx_14_03_itms.10874.10874.2	3.9507	0.458	100.0%	1753.5322	1753.8651	1	8.771	69.2%	2	K.LVSWYDNEYGYSTR.V	2
PARC_hx_14_03_itms.08896.08896.2	2.7601	0.296	100.0%	1108.7722	1109.3109	1	5.562	83.3%	1	R.VVDLVEHVAK.A	2

U	YBR181C	4	5	23.3%	236	26996	10.4	RPS6B SGDID:S000000385, Chr II from 592769-592764,592411-591707, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Ap and has similarity to rat S6 ribosomal protein"
U	YPL090C	4	5	23.3%	236	26996	10.4	RPS6A SGDID:S000006011, Chr XVI from 378392-378387,377992-377288, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to rat S6 ribosomal protein"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.09004.09004.2	2.4975	0.0151	98.9%	1320.4722	1320.4882	4	3.79	59.1%	1	K.LNISYPVNGSQK.T	2
PARC_hx_14_02_itms.09057.09057.2	5.2226	0.4332	100.0%	1593.6122	1593.6874	1	8.659	78.6%	1	R.IGQEVDGEAVGDEFK.G	2
PARC_hx_14_03_itms.09239.09239.2	2.957	0.2841	100.0%	1745.4122	1745.9243	1	5.953	56.7%	1	K.KGEQELEGLTDTTVPK.R	2
PARC_hx_14_02_itms.10247.10247.2	3.8088	0.3208	100.0%	1277.9321	1278.4479	1	6.408	72.7%	2	R.EAAAEYAQLLAK.R	2

YER031C

22.0%

223

24469

5.1

YPT31 SGDID:S000000833, Chr V from 214746-214075, reverse complement, Verified ORF, "GTPase of the Ypt/Rab family, very similar to Ypt32p; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08742.08742.2	2.2748	0.2805	99.9%	1275.3522	1275.3634	1	5.198	80.0%	1	K.AQIWDTAGQER.Y	2
	PARC_hx_14_02_itms.09471.09471.2	3.0892	0.1517	99.8%	1530.0322	1529.647	25	4.245	57.1%	1	R.ENADDNVAVGLIGNK.S	2
*	PARC_hx_14_04_itms.12189.12189.2	3.8459	0.3099	100.0%	2600.6921	2600.7986	1	6.669	45.5%	1	K.TFAQENQLLFTETSALNSENVDK.A	2

YHR028C

21.1%

818

93404

5.5

DAP2 SGDID:S000001070, Chr VIII from 167427-164971, reverse complement, Verified ORF, "Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor; localizes to the vacuolar membrane; similar to Ste13p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10556.10556.2	4.4308	0.43	100.0%	1689.4922	1689.8163	1	8.339	67.9%	2	K.SVYDDSYNSVLLEGK.T	2
*	PARC_hx_14_03_itms.07838.07838.2	2.1066	0.227	99.8%	1005.3122	1005.0781	1	4.527	85.7%	1	R.TNSVQNWR.H	2
*	PARC_hx_14_04_itms.13514.13514.2	4.4417	0.4463	100.0%	2273.3323	2274.4858	1	7.165	58.3%	6	K.IDESEVGEFIIPYYVQDEK.D	2
*	PARC_hx_14_05_itms.16551.16551.2	2.5338	0.0326	98.9%	2116.8323	2115.4343	2	2.671	42.1%	1	K.DGSLLITEVTWVGNGNVLVK.T	2
*	PARC_hx_14_03_itms.11082.11082.2	2.799	0.3021	98.8%	1631.6122	1631.658	1	5.676	53.8%	1	R.NESSNGGWWEITHN.T	2
*	PARC_hx_14_04_itms.12525.12525.2	5.1456	0.5271	100.0%	1865.4722	1865.0704	1	9.215	76.7%	5	K.WEVVNGPLAFDSMENR.L	2
*	PARC_hx_14_04_itms.09874.09874.1	1.7554	0.0691	95.8%	899.7	900.06537	42	3.182	66.7%	1	R.LYFISTR.K	1
*	PARC_hx_14_04_itms.11853.11853.2	4.4477	0.5661	100.0%	2705.0122	2704.8176	1	10.672	50.0%	1	R.SPNEIIEVTDTSEDGVYDVSFSSGR.R	2
*	PARC_hx_14_02_itms.09116.09116.2	3.2561	0.2585	100.0%	1076.2922	1076.2377	1	6.375	93.8%	1	K.ILEDYAVPR.K	2
*	PARC_hx_14_05_itms.15312.15312.2	3.7182	0.3852	100.0%	2040.5122	2041.2653	1	7.398	61.1%	2	R.DQISAASLYGSLTFVDPQK.I	2
*	PARC_hx_14_03_itms.11223.11223.2	3.1874	0.3676	100.0%	1382.3322	1382.5768	1	6.507	72.7%	3	K.YGMSVAPVTDWR.F	2
*	PARC_hx_14_02_itms.08727.08727.2	3.1855	0.3355	100.0%	1180.5922	1180.2592	1	6.378	87.5%	1	R.FYDSVYTER.Y	2

YNL071W

21.0%

482

51818

7.8

LAT1 SGDID:S000005015, Chr XIV from 491524-492972, Verified ORF, "Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.13796.13796.2	5.0664	0.4702	100.0%	1931.6322	1931.0607	1	8.763	73.5%	2	K.EGDQLSPGEVIAEIETDK.A	2
*	PARC_hx_14_05_itms.11234.11234.2	3.5772	0.3214	100.0%	1700.6522	1700.9725	1	6.043	67.9%	2	K.DIPVNKPIAVYVEDK.A	2
*	PARC_hx_14_04_itms.08922.08922.1	2.0669	0.0484	95.7%	846.61	847.0452	2	3.05	71.4%	1	R.IFASPLAK.T	1
*	PARC_hx_14_02_itms.09838.09838.2	3.0302	0.2703	100.0%	1068.2322	1068.1687	1	4.644	87.5%	1	K.ADIESYLEK.S	2
*	PARC_hx_14_05_itms.11696.11696.2	5.163	0.5157	100.0%	1721.2122	1721.9915	1	8.47	66.7%	3	R.LLQSTQGIPSYIVSSK.I	2
*	PARC_hx_14_05_itms.13916.13916.2	2.9458	0.1641	99.9%	1014.9922	1015.2383	1	3.575	93.8%	3	K.LSINDLLVK.A	2
*	PARC_hx_14_04_itms.11535.11535.2	4.7782	0.4957	100.0%	1871.7322	1872.0905	1	8.164	70.0%	7	R.VPDANAYWLPNENVIR.K	2
*	PARC_hx_14_02_itms.08876.08876.2	3.4626	0.1813	100.0%	1089.1522	1089.234	1	4.656	83.3%	2	K.GLSQISNEIK.E	2

U	YDR418W	2	7	20.6%	165	17823	9.4	RPL12B SGDID:S000002826, Chr IV from 1301606-1302103, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins"
U	YEL054C	2	7	20.6%	165	17823	9.4	RPL12A SGDID:S000000780, Chr V from 53218-52721, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Bp; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.08286.08286.2	3.6597	0.4259	100.0%	1298.4521	1298.4819	1	6.722	78.6%	2	R.AVGGEVGASAALAPK.I	2
	PARC_hx_14_04_itms.11841.11841.2	4.3713	0.345	100.0%	2074.7522	2075.2395	1	5.88	61.1%	5	K.NPHDIIEGINAGEIEIPEN.-	2

YOR327C

20.0%

115

12957

8.8

SNC2 SGDID:S000005854, Chr XV from 931076-930729, reverse complement, Verified ORF, "Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.09252.09252.2	2.3152	0.3864	100.0%	1277.3922	1277.435	1	5.665	75.0%	1	R.QEIDDTVGIMR.D	2
*	PARC_hx_14_02_itms.09332.09332.2	4.0555	0.4135	100.0%	1235.4521	1235.3824	1	7.408	81.8%	1	K.ADNLAISAQGFK.R	2

YOR270C

19.9%

840

95529

5.5

VPH1 SGDID:S000005796, Chr XV from 830571-828049, reverse complement, Verified ORF, "Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V-ATPase complexes of the vacuole while Stv1p is located in V-ATPase complexes of the Golgi and endosomes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14888.14888.2	3.5015	0.3312	100.0%	1669.6721	1668.89	1	6.82	57.1%	3	R.DSAYTLGQLGLVQFR.D	2
*	PARC_hx_14_05_itms.14348.14348.2	3.7546	0.4588	100.0%	2401.7122	2402.6196	1	7.262	42.9%	3	K.YLDGSGELYVPPSGSVIDDYVR.N	2
*	PARC_hx_14_03_itms.09773.09773.2	4.9754	0.3173	100.0%	1762.3722	1761.985	1	6.558	82.1%	2	R.LIQMEDATDQIEVQK.N	2
*	PARC_hx_14_05_itms.15218.15218.2	4.2042	0.2398	100.0%	1445.7722	1444.6702	1	4.905	90.9%	2	R.FILQSGDEFFLK.G	2
*	PARC_hx_14_05_itms.15210.15210.2	3.2939	0.2603	100.0%	1229.1921	1229.4648	1	5.097	83.3%	2	K.VATLEQILWR.V	2
*	PARC_hx_14_02_itms.09213.09213.2	4.3632	0.3634	100.0%	1420.0521	1420.6024	1	7.396	77.3%	1	K.TVEIEQPVYDVK.T	2
*	PARC_hx_14_02_itms.10110.10110.2	5.1179	0.5588	100.0%	2068.4722	2069.146	1	10.305	55.6%	2	K.IAESLDANLYDVDSSNEGR.S	2
*	PARC_hx_14_03_itms.13130.13130.2	4.1766	0.4529	100.0%	1630.0521	1628.8169	1	8.069	71.4%	5	K.TTSTTLESELYAIAK.E	2
*	PARC_hx_14_03_itms.12956.12956.2	3.6625	0.4469	100.0%	1396.0521	1396.4991	1	7.408	75.0%	3	K.ELDSWFQDVTR.E	2
*	PARC_hx_14_05_itms.14282.14282.2	3.7559	0.322	100.0%	1168.5721	1168.4246	1	6.345	88.9%	2	K.ILIAEGWIPR.D	2
*	PARC_hx_14_02_itms.08297.08297.2	3.076	0.1739	100.0%	1016.6722	1017.1271	2	4.931	87.5%	1	R.DELATLQAR.L	2
*	PARC_hx_14_05_itms.17278.17278.2	2.3718	0.2208	99.8%	2043.5122	2041.3099	3	5.551	40.6%	1	K.FFVGEGLPYEPFAFEYK.D	2

YDL229W

19.9%

613

66602

5.4

SSB1 SGDID:S000002388, Chr IV from 44066-45907, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; interacts with the phosphatase subunit Reg1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11259.11259.2	2.5162	0.216	99.8%	1479.6322	1480.6604	1	4.298	62.5%	2	R.VTPSFVAFTPEER.L	2
	PARC_hx_14_03_itms.13335.13335.2	5.051	0.4285	100.0%	2163.9521	2161.4138	1	7.986	63.9%	2	K.VIDVDGNPVIEVQYLEETK.T	2
	PARC_hx_14_03_itms.10772.10772.2	2.8222	0.1666	99.8%	1186.0922	1186.3536	1	4.648	77.3%	1	K.DAGAISGLNVLR.I	2
	PARC_hx_14_03_itms.11766.11766.2	2.4327	0.1299	99.7%	1168.0122	1168.3348	4	4.1	77.8%	1	R.FEDLNAALFK.S	2
	PARC_hx_14_03_itms.10065.10065.2	3.3504	0.0164	99.6%	1461.9321	1460.6273	1	5.787	65.4%	1	K.SQIDEVVLVGGSTR.I	2
	PARC_hx_14_03_itms.13023.13023.2	2.6563	0.2414	99.9%	1280.4722	1279.4326	1	4.669	75.0%	2	K.ENTLLGEFDLK.N	2
	PARC_hx_14_05_itms.15249.15249.2	4.3402	0.4756	100.0%	2167.9521	2167.418	1	8.723	52.6%	1	R.LESYVASIEQTVTDPVLSSK.L	2
	PARC_hx_14_05_itms.17147.17147.2	3.493	0.303	100.0%	2411.8123	2412.6562	1	5.863	45.5%	1	K.IEAALSDALAALQIEDPSADELR.K	2

YML028W

19.9%

196

21590

5.1

TSA1 SGDID:S000004490, Chr XIII from 220138-220728, Verified ORF, "Ubiquitous housekeeping thioredoxin peroxidase, reduces reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; mediates redox regulation of the nuclear localization of Yap1p; deletion results in mutator phenotype"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12119.12119.2	4.4597	0.4578	100.0%	1594.6322	1594.7588	1	9.375	75.0%	1	K.TAVVDGVFDEVSLDK.Y	2
*	PARC_hx_14_03_itms.12378.12378.2	3.9575	0.3924	100.0%	1562.8922	1563.7478	1	7.358	76.9%	1	R.DYGVLIEEEGVALR.G	2
*	PARC_hx_14_03_itms.11114.11114.2	2.2131	0.0935	99.2%	1237.4722	1237.3977	3	4.163	72.2%	1	R.LVEAFQWTDK.N	2

YLL024C

19.7%

639

69470

5.1

SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10496.10496.2	2.6169	0.2723	99.9%	1459.2922	1458.5676	1	5.471	66.7%	2	R.TTPSFVGFTDTER.L	2
*	PARC_hx_14_03_itms.09510.09510.2	4.1936	0.4263	100.0%	1592.3722	1592.7667	1	7.208	64.3%	1	K.NQAAMNPANTVFDAK.R	2
	PARC_hx_14_03_itms.11019.11019.2	4.0989	0.4693	100.0%	1896.2922	1896.0667	1	7.305	59.4%	2	K.VNDAVVTVPAYFNDSQR.Q	2
	PARC_hx_14_03_itms.11633.11633.2	5.1339	0.4275	100.0%	1663.2322	1660.9078	1	8.571	80.0%	3	R.IINEPTAAAIAYGLDK.K	2
	PARC_hx_14_03_itms.12389.12389.2	3.1824	0.1365	99.9%	1300.4321	1300.4198	1	4.475	83.3%	2	R.FEELCADLFR.S	2
	PARC_hx_14_03_itms.10139.10139.2	4.0973	0.1153	100.0%	1460.2922	1460.6273	1	6.806	73.1%	2	K.SQVDEIVLVGGSTR.I	2
	PARC_hx_14_05_itms.14357.14357.2	3.8152	0.4175	100.0%	1759.0922	1760.0558	1	8.322	70.6%	2	L.DVAPLSLGIETAGGVMTK.L	2
	PARC_hx_14_03_itms.11122.11122.2	3.3922	0.2347	100.0%	1268.1122	1266.4368	1	5.211	75.0%	1	K.NQLESIAYSLK.N	2
*	PARC_hx_14_02_itms.09228.09228.2	2.7939	0.1324	99.8%	1358.8322	1359.5804	1	5.889	68.2%	1	K.ELQEVANPIMSK.L	2

YHL031C

19.7%

223

25395

9.4

GOS1 SGDID:S000001023, Chr VIII from 39484-38813, reverse complement, Verified ORF, "v-SNARE protein involved in Golgi transport, homolog of the mammalian protein GOS-28/GS28"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11560.11560.2	3.0139	0.0185	99.3%	1522.3922	1520.7203	1	4.098	65.4%	1	K.AISLETQTESLLSK.Y	2
*	PARC_hx_14_05_itms.13931.13931.2	3.5912	0.4	100.0%	2263.0522	2263.4297	1	7.268	45.0%	1	R.QDVIDSLTQICDSNPAISASK.L	2
*	PARC_hx_14_03_itms.09108.09108.2	2.6217	0.0945	99.7%	1104.4722	1104.2511	1	4.858	87.5%	1	R.LISQAWETR.S	2

U	YHL001W	2	8	18.8%	138	15153	10.9	RPL14B SGDID:S000000993, Chr VIII from 104272-104400,104799-105086, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Ap and has similarity to rat L14 ribosomal protein"
U	YKL006W	2	8	18.8%	138	15167	10.9	RPL14A SGDID:S000001489, Chr XI from 431549-431677,432076-432363, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Bp and has similarity to rat L14 ribosomal protein; rpl14a csh5 double null mutant exhibits synthetic slow growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.11726.11726.2	4.5639	0.3359	100.0%	1213.1721	1213.46	1	5.836	85.0%	6	K.LAAIVEIIDQK.K	2
	PARC_hx_14_02_itms.16594.16594.2	4.5316	0.5074	100.0%	1614.6721	1614.9255	1	8.305	75.0%	2	R.QAINLGQVVLTPLTF.A	2

YOL127W

18.3%

142

15758

10.1

RPL25 SGDID:S000005487, Chr XV from 80347-80359,80774-81189, Verified ORF, "Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 26S rRNA via a conserved C-terminal motif"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08465.08465.2	3.4878	0.3758	100.0%	1447.6721	1447.6868	1	6.512	79.2%	1	K.VIEQPITSETAMK.K	2
*	PARC_hx_14_02_itms.10300.10300.2	4.4328	0.3587	100.0%	1451.2522	1451.576	1	7.868	83.3%	1	R.LTADYDALDIANR.I	2

YDR452W

18.2%

674

78344

6.9

PPN1 SGDID:S000002860, Chr IV from 1362868-1364892, Verified ORF, "Vacuolar endopolyphosphatase with a role in phosphate metabolism; functions as a homodimer"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13155.13155.2	4.7763	0.3263	100.0%	1864.2322	1865.0068	1	7.078	66.7%	5	R.GDNESLQLLNDIEFTR.L	2
*	PARC_hx_14_04_itms.13790.13790.2	3.7361	0.3004	100.0%	1909.8322	1910.174	1	6.872	59.4%	5	K.AMSGCDSPVILMEETLR.W	2
*	PARC_hx_14_05_itms.15227.15227.2	3.6169	0.3632	100.0%	1450.8722	1449.6494	1	5.991	72.7%	1	K.IDFVIWTGDNIR.H	2
*	PARC_hx_14_04_itms.11333.11333.2	4.8278	0.4554	100.0%	1709.6322	1709.9116	1	8.198	67.9%	4	R.TEAQIFDMNNIVADK.M	2
*	PARC_hx_14_02_itms.09575.09575.2	4.6199	0.4393	100.0%	1596.5122	1596.7089	1	8.248	76.9%	1	K.MTELFSAGNEEDPR.D	2
*	PARC_hx_14_03_itms.11897.11897.2	3.4466	0.3818	100.0%	1249.2922	1249.4497	1	6.987	72.7%	3	R.SASFLTEVIPGK.L	2
*	PARC_hx_14_04_itms.10797.10797.2	3.3268	0.3006	100.0%	1260.8322	1260.432	1	5.576	88.9%	3	R.FVQFYADLEK.I	2
*	PARC_hx_14_03_itms.08657.08657.2	2.0367	0.1313	99.0%	1546.7322	1545.6921	1	4.203	54.2%	1	K.INQELHNSFVESK.D	2
*	PARC_hx_14_04_itms.10785.10785.2	4.5197	0.4427	100.0%	1654.8922	1654.7295	1	8.488	65.4%	2	K.YVEWSFASSGYKDD.-	2

YDL055C

18.0%

361

39566

6.3

PSA1 SGDID:S000002213, Chr IV from 356759-355674, reverse complement, Verified ORF, "GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.17454.17454.2	3.8079	0.4611	100.0%	2290.7122	2292.5159	1	7.589	55.6%	1	K.DNSPFFVLNSDVICEYPFK.E	2
*	PARC_hx_14_02_itms.11141.11141.2	1.9286	0.0994	98.9%	1205.1522	1205.3936	1	3.545	66.7%	1	K.ETFPILVEEK.Q	2
*	PARC_hx_14_04_itms.10742.10742.2	3.6816	0.2901	100.0%	1740.1122	1740.0098	1	6.445	55.9%	1	K.LATGANIVGNALIDPTAK.I	2
*	PARC_hx_14_05_itms.12884.12884.2	4.0318	0.439	100.0%	1778.5521	1779.0464	1	7.335	58.8%	3	K.IGPDVVIGPNVTIGDGVR.I	2

YPL053C

17.7%

446

52128

5.5

KTR6 SGDID:S000005974, Chr XVI from 458455-457115, reverse complement, Verified ORF, "Probable mannosylphosphate transferase involved in the synthesis of core oligosaccharides in protein glycosylation pathway; member of the KRE2/MNT1 mannosyltransferase family"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11165.11165.2	2.4931	0.2593	99.9%	1198.1522	1196.3551	2	5.238	72.2%	1	K.ACFVSLITER.D	2
*	PARC_hx_14_04_itms.13869.13869.2	3.1146	0.1709	99.7%	1834.8922	1835.0796	5	5.603	50.0%	3	R.DSMTQILQSIDEVQVK.F	2
*	PARC_hx_14_03_itms.10960.10960.2	3.4206	0.3027	100.0%	1860.8121	1860.0894	1	5.764	43.8%	1	R.QAITDSMNGDPELINIK.F	2
*	PARC_hx_14_05_itms.16455.16455.2	4.2113	0.3966	100.0%	2351.8323	2352.5615	1	7.559	61.1%	1	K.FAEIPADEWVYPEWIDENK.A	2
*	PARC_hx_14_03_itms.11422.11422.2	3.0687	0.2943	100.0%	1716.1122	1715.8577	1	5.234	50.0%	1	K.AAESLISLANVPDGDSR.A	2

contaminant_SPA1_STAAU

17.4%

524

57320

5.7

owl|P02976| IMMUNOGLOBULIN G BINDING PROTEIN A PRECURSOR (PROTEIN A). - STAPHYLOCOCCUS...

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_05_itms.11852.11852.2	4.3893	0.3789	100.0%	1676.4521	1676.8877	1	6.978	76.9%	1	F.YQVLNMPNLNADQR.N	2
	PARC_hx_14_03_itms.09959.09959.2	3.4045	0.3224	100.0%	1513.9922	1513.7118	1	6.161	70.8%	3	Y.QVLNMPNLNADQR.N	2
	PARC_hx_14_02_itms.08057.08057.2	3.09	0.2345	98.8%	1173.1322	1173.2891	5	5.039	83.3%	1	L.NMPNLNADQR.N	2
*	PARC_hx_14_05_itms.16136.16136.2	4.8244	0.3644	100.0%	2381.872	2382.6099	1	7.302	55.3%	5	K.DQQSAFYEILNMPNLNEAQR.N	2
*	PARC_hx_14_05_itms.16138.16138.3	5.1062	0.3235	100.0%	2382.2344	2382.6099	1	6.772	46.1%	2	K.DQQSAFYEILNMPNLNEAQR.N	3
*	PARC_hx_14_03_itms.10656.10656.2	3.3923	0.2088	98.9%	1545.4922	1542.7502	1	4.967	83.3%	2	Y.EILNMPNLNEAQR.N	2
	PARC_hx_14_02_itms.07846.07846.2	2.876	0.3876	100.0%	1461.4722	1461.5254	1	6.58	57.7%	1	K.DDPSQSTNVLGEAK.K	2
	PARC_hx_14_04_itms.05352.05352.2	1.8728	0.0421	98.2%	1015.03217	1015.15454	16	2.735	68.8%	2	K.KLNESQAPK.A	2
	PARC_hx_14_05_itms.16095.16095.2	2.968	0.1221	99.8%	2480.9922	2481.699	3	4.762	34.2%	3	K.EQQNAFYEILNMPNLNEEQR.N	2
	PARC_hx_14_05_itms.16053.16053.3	4.5345	0.3594	100.0%	2482.2244	2481.699	1	6.201	46.1%	1	K.EQQNAFYEILNMPNLNEEQR.N	3
	PARC_hx_14_03_itms.10610.10610.2	2.9624	0.1848	98.3%	1601.5521	1600.787	3	4.088	54.2%	1	Y.EILNMPNLNEEQR.N	2
	PARC_hx_14_02_itms.08801.08801.2	2.9088	0.3311	100.0%	1458.5922	1459.5529	1	6.061	61.5%	1	K.DDPSQSANLLAEAK.K	2

YLR447C

17.4%

345

39791

4.6

VMA6 SGDID:S000004439, Chr XII from 1027889-1026852, reverse complement, Verified ORF, "Subunit D of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found in the endomembrane system; stabilizes VO subunits; required for V1 domain assembly on the vacuolar membrane"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12870.12870.2	4.4169	0.3901	100.0%	2201.9922	2199.36	1	8.213	67.6%	4	K.NCFDTAEELDDMNIEIIR.N	2
*	PARC_hx_14_03_itms.12048.12048.2	3.3375	0.2277	100.0%	1570.7322	1570.7236	1	6.169	62.5%	1	K.ECMQTLLGFEADR.R	2
*	PARC_hx_14_04_itms.11810.11810.2	5.6236	0.4118	100.0%	2044.8922	2044.2665	1	7.69	69.4%	2	R.SINIALNSLQSSDIDPDLK.S	2
*	PARC_hx_14_02_itms.09220.09220.2	3.1422	0.3786	100.0%	1170.2122	1170.3103	1	6.517	77.8%	1	R.AALANVYEYR.G	2

YGR086C

17.1%

339

38349

4.6

PIL1 SGDID:S000003318, Chr VII from 650621-649602, reverse complement, Verified ORF, "Long chain base-responsive inhibitor of protein kinases Pkh1p and Pkh2p, acts along with Lsp1p to down-regulate heat stress resistance via regulation of the Pkc1p and Ypk1p pathways; phosphorylated by Phk1p and Phk2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08993.08993.2	3.2677	0.2942	100.0%	1164.6122	1163.2755	1	5.257	77.3%	1	R.SAAGAFGPELSR.K	2
*	PARC_hx_14_03_itms.13266.13266.2	4.3936	0.4612	100.0%	2165.172	2164.2874	1	8.731	55.6%	1	K.QLSIWGLENDDDVSDITDK.L	2
*	PARC_hx_14_03_itms.10662.10662.2	2.849	0.1903	99.9%	1229.5122	1228.4313	1	4.3	88.9%	1	K.IEVLEQELVR.A	2
	PARC_hx_14_03_itms.11291.11291.2	4.6335	0.3537	100.0%	1802.5122	1802.9792	1	6.809	62.5%	2	R.AEAESLVAEAQLSNITR.S	2

YLR093C

17.0%

253

28964

5.7

NYV1 SGDID:S000004083, Chr XII from 327416-327401,327259-326514, reverse complement, Verified ORF, "v-SNARE component of the vacuolar SNARE complex involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11306.11306.2	3.31	0.2689	100.0%	1199.3121	1198.4044	1	5.765	88.9%	6	R.FNVSYVEVIK.N	2
*	PARC_hx_14_04_itms.09896.09896.2	4.0649	0.3314	100.0%	1643.6721	1643.7595	1	7.018	76.9%	5	K.NGETISSCFQPFQK.N	2
*	PARC_hx_14_02_itms.10983.10983.2	4.1993	0.2994	100.0%	1418.3522	1418.605	1	6.516	81.8%	1	K.DVIQIMNDNIDK.F	2
*	PARC_hx_14_02_itms.08769.08769.1	2.2835	0.0426	96.6%	773.66	773.9481	8	3.264	75.0%	1	R.VSLLVDK.T	1

contaminant_TRYPSIN

17.0%

229

23993

7.9

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10815.10815.2	3.2398	0.3048	98.6%	2102.372	2101.2866	2	5.836	42.1%	1	K.IVGGYTCGANTVPYQVSLNS.G	2
*	PARC_hx_14_02_itms.10701.10701.2	3.3709	0.2339	98.9%	2158.112	2158.3386	2	4.82	40.0%	1	K.IVGGYTCGANTVPYQVSLNSG.Y	2
*	PARC_hx_14_05_itms.12377.12377.2	4.3057	0.2782	100.0%	1686.8922	1686.8309	1	6.571	70.0%	1	F.CGGSLINSQWVVSAAH.C	2
*	PARC_hx_14_05_itms.12378.12378.2	4.7936	0.4278	100.0%	1470.6122	1469.6401	1	7.669	80.8%	3	G.GSLINSQWVVSAAH.C	2
*	PARC_hx_14_03_itms.09658.09658.2	3.6115	0.382	100.0%	1308.6522	1308.4021	1	7.252	80.0%	1	N.SQWVVSAAHCY.K	2

U	YBR191W	3	3	16.9%	160	18242	10.4	RPL21A SGDID:S000000395, Chr II from 606265-606275,606664-607135, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein"
U	YPL079W	3	3	16.9%	160	18274	10.4	RPL21B SGDID:S000006000, Chr XVI from 406633-406643,407065-407536, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Ap and has similarity to rat L21 ribosomal protein"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.07944.07944.2	2.8433	0.2687	100.0%	980.8522	981.13684	1	6.18	81.2%	1	K.TGVVYNVTK.S	2
PARC_hx_14_03_itms.08254.08254.2	3.2918	0.2153	100.0%	917.97217	917.09344	1	5.932	93.8%	1	K.SSVGVIINK.M	2
PARC_hx_14_03_itms.08009.08009.2	3.1484	0.2264	100.0%	914.1922	914.09283	1	4.961	87.5%	1	K.AQGVAVQLK.R	2

U	YDR471W	2	2	16.9%	136	15505	10.4	RPL27B SGDID:S000002879, Chr IV from 1401760-1401790,1402175-1402554, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Ap and has similarity to rat L27 ribosomal protein"
U	YHR010W	2	2	16.9%	136	15531	10.4	RPL27A SGDID:S000001052, Chr VIII from 126515-126545,127107-127486, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Bp and has similarity to rat L27 ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.10985.10985.2	2.6129	0.1836	99.9%	1086.3121	1086.2297	2	4.772	81.2%	1	R.YTLDVEAFK.S	2
	PARC_hx_14_02_itms.08493.08493.2	4.3391	0.3457	100.0%	1595.5122	1595.7062	1	6.743	73.1%	1	K.SVVSTETFEQPSQR.E	2

YLR448W

16.5%

176

19986

10.1

RPL6B SGDID:S000004440, Chr XII from 1028849-1028863,1029248-1029763, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08132.08132.2	3.2064	0.2616	100.0%	1060.0122	1060.1925	1	5.841	88.9%	1	K.VSVEGVNVEK.F	2
	PARC_hx_14_03_itms.10587.10587.2	1.971	0.034	98.5%	1018.03217	1018.15704	1	2.907	85.7%	1	K.FNVEYFAK.E	2
	PARC_hx_14_03_itms.10559.10559.1	1.9749	0.1553	100.0%	1018.63	1018.15704	4	4.118	71.4%	1	K.FNVEYFAK.E	1
*	PARC_hx_14_02_itms.08704.08704.2	2.4166	0.1211	99.6%	1305.6921	1305.43	12	4.017	60.0%	1	K.EANLFPEQQTK.E	2

YDR481C

16.3%

566

63004

5.6

PHO8 SGDID:S000002889, Chr IV from 1420240-1418540, reverse complement, Verified ORF, "Repressible alkaline phosphatase, a glycoprotein localized to the vacuole; regulated by levels of inorganic phosphate and by a system consisting of Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14180.14180.3	3.8097	0.358	100.0%	2044.0443	2044.189	1	6.284	41.2%	2	R.SSDSLVTDSAAGATAFACALK.S	3
*	PARC_hx_14_05_itms.14222.14222.2	6.3042	0.4789	100.0%	2045.0322	2044.189	1	9.902	65.0%	6	R.SSDSLVTDSAAGATAFACALK.S	2
*	PARC_hx_14_03_itms.10510.10510.1	2.5216	0.288	100.0%	1016.66	1017.2316	5	5.619	72.2%	1	R.VVDLLMGGGR.S	1
*	PARC_hx_14_03_itms.10520.10520.2	3.5863	0.3919	100.0%	1017.5722	1017.2316	1	6.724	94.4%	2	R.VVDLLMGGGR.S	2
*	PARC_hx_14_03_itms.11852.11852.2	5.2866	0.513	100.0%	1965.8922	1967.0587	1	9.497	75.0%	8	R.DLIDEAQSNGWQYVGDR.K	2
*	PARC_hx_14_03_itms.08411.08411.1	1.8964	0.0553	96.1%	800.36	800.97375	3	3.433	71.4%	1	K.VALGALEK.A	1
*	PARC_hx_14_03_itms.08433.08433.2	2.0284	0.0814	99.0%	800.8122	800.97375	1	2.806	85.7%	1	K.VALGALEK.A	2
*	PARC_hx_14_03_itms.13112.13112.2	4.2034	0.2442	100.0%	1460.5521	1459.6166	1	7.201	75.0%	5	K.DSNGFFLMVEGSR.I	2
*	PARC_hx_14_05_itms.05120.05120.2	4.3212	0.4439	100.0%	1645.6322	1645.7317	1	7.705	78.6%	2	R.IDHAGHQNDPASQVR.E	2
*	PARC_hx_14_02_itms.09395.09395.2	3.343	0.2823	100.0%	983.83215	982.14246	2	6.119	92.9%	1	K.LNDMVSFR.A	2

YDR432W

16.2%

414

45407

5.5

NPL3 SGDID:S000002840, Chr IV from 1328773-1330017, Verified ORF, "RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm; phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.16500.16500.2	2.7149	0.2404	99.9%	1974.1921	1973.1895	1	5.294	47.1%	2	K.ILNGFAFVEFEEAESAAK.A	2
*	PARC_hx_14_03_itms.10640.10640.2	3.29	0.2748	100.0%	1482.6522	1482.6763	1	6.902	70.8%	1	K.SFANQPLEVVYSK.L	2
*	PARC_hx_14_03_itms.09821.09821.2	3.3886	0.3819	100.0%	1585.6122	1585.6677	1	7.464	53.8%	1	R.ENSLETTFSSVNTR.D	2
*	PARC_hx_14_05_itms.19178.19178.2	5.5084	0.4319	100.0%	2437.7522	2438.6501	1	7.949	57.1%	1	R.DFDGTGALEFPSEEILVEALER.L	2
*	PARC_hx_14_05_itms.19134.19134.3	4.7439	0.4758	100.0%	2438.6943	2438.6501	1	8.687	40.5%	2	R.DFDGTGALEFPSEEILVEALER.L	3

YLR058C

16.0%

469

52219

7.4

SHM2 SGDID:S000004048, Chr XII from 259402-257993, reverse complement, Verified ORF, "Cytosolic serine hydroxymethyltransferase, involved in one-carbon metabolism"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14493.14493.2	3.8274	0.4414	100.0%	1667.5922	1667.8584	1	8.185	53.8%	2	K.ISAVSTYFESFPYR.V	2
*	PARC_hx_14_02_itms.10715.10715.2	4.5184	0.3335	100.0%	1710.5922	1707.8749	1	6.919	78.6%	5	R.VNPETGIIDYDTLEK.N	2
*	PARC_hx_14_03_itms.08265.08265.2	3.506	0.3279	100.0%	1197.4521	1197.3428	1	7.062	85.0%	1	K.VLVAGTSAYCR.L	2
*	PARC_hx_14_03_itms.07929.07929.2	2.6837	0.222	100.0%	918.33215	918.09906	1	5.092	87.5%	1	R.IGAPAMTTR.G	2
*	PARC_hx_14_04_itms.10022.10022.2	4.7561	0.2161	100.0%	1573.4722	1573.7893	1	5.174	69.2%	6	K.AVEFAQQVQQSLPK.D	2
*	PARC_hx_14_02_itms.09964.09964.2	4.2488	0.442	100.0%	1363.1921	1363.4668	1	7.893	86.4%	1	K.VDEGSDVLNTWK.K	2

U	YJL177W	2	3	15.8%	184	20551	10.9	RPL17B SGDID:S000003713, Chr X from 90784-91092,91410-91655, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins"
U	YKL180W	2	3	15.8%	184	20549	10.9	RPL17A SGDID:S000001663, Chr XI from 109274-109582,109889-110134, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the components of the outer kinetochore DASH complex"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.09989.09989.2	3.7488	0.3014	100.0%	1462.2322	1461.6146	1	5.749	62.5%	1	R.ETAQAINGWELTK.A	2
	PARC_hx_14_05_itms.11462.11462.2	5.9369	0.3496	100.0%	1645.5322	1645.8558	1	7.963	80.0%	2	K.FVQGLLQNAAANAEAK.G	2

U	YBR031W	4	8	15.7%	362	39092	10.6	RPL4A SGDID:S000000235, Chr II from 300166-301254, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins"
U	YDR012W	4	8	15.7%	362	39062	10.6	RPL4B SGDID:S000002419, Chr IV from 471850-472938, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_05_itms.16376.16376.2	3.9052	0.4452	100.0%	1882.1322	1882.2047	1	7.421	62.5%	3	K.IPEIPLVVSTDLESIQK.T	2
PARC_hx_14_03_itms.10845.10845.2	4.8855	0.4073	100.0%	1475.5322	1474.697	1	8.512	80.8%	3	R.GPLVVYAEDNGIVK.A	2
PARC_hx_14_02_itms.09059.09059.2	3.9321	0.4774	100.0%	1507.2722	1507.6403	1	8.406	76.9%	1	K.LDQVWGSETVASSK.V	2
PARC_hx_14_03_itms.09498.09498.2	4.1666	0.3392	100.0%	1330.9922	1331.5118	1	7.472	77.3%	1	R.IINSSEIQSAIR.P	2

YFL018C

15.6%

499

54010

8.0

LPD1 SGDID:S000001876, Chr VI from 103121-101622, reverse complement, Verified ORF, "Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09027.09027.2	3.5143	0.3393	100.0%	1409.3922	1409.5481	1	7.061	70.8%	1	K.AAQLGFNTACVEK.R	2
*	PARC_hx_14_05_itms.14816.14816.2	6.1023	0.4596	100.0%	2359.0322	2359.6355	1	9.145	57.1%	3	K.NIIVATGSEVTPFPGIEIDEEK.I	2
*	PARC_hx_14_04_itms.10988.10988.2	3.6528	0.4469	100.0%	2105.4521	2106.3984	1	7.374	47.4%	1	K.VTVVEFQPQIGASMDGEVAK.A	2
*	PARC_hx_14_02_itms.09195.09195.2	2.1427	0.0533	98.9%	1179.4321	1179.3153	1	3.584	83.3%	1	R.LVIDDQFNSK.F	2
*	PARC_hx_14_02_itms.11166.11166.2	4.3811	0.4287	100.0%	1390.1322	1390.5916	1	7.081	79.2%	1	K.AEEEGIAAVEMLK.T	2

contaminant_KERATIN07

15.6%

473

50915

5.5

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
	PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
	PARC_hx_14_02_itms.08356.08356.1	2.3799	0.2501	100.0%	1301.64	1302.4241	3	5.376	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
	PARC_hx_14_02_itms.08423.08423.2	4.0735	0.3888	100.0%	1302.4321	1302.4241	1	7.703	81.8%	2	R.ALEEANADLEVK.I	2 2 2 2
*	PARC_hx_14_05_itms.13359.13359.3	6.1695	0.4442	100.0%	2065.9744	2065.3774	1	7.798	56.9%	1	K.IIAATIENAQPILQIDNAR.L	3
*	PARC_hx_14_05_itms.13388.13388.2	5.4423	0.3753	100.0%	2066.152	2065.3774	1	7.406	61.1%	3	K.IIAATIENAQPILQIDNAR.L	2
	PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.T	1 1 1 1 1 1
	PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.T	2 2 2 2 2 2
	PARC_hx_14_02_itms.10118.10118.2	3.9459	0.2635	100.0%	1030.4122	1030.2096	1	5.89	93.8%	3	R.VLDELTLAR.T	2 2 2 2 2
	PARC_hx_14_02_itms.08202.08202.2	3.5049	0.1667	100.0%	1224.0521	1221.3068	1	5.774	75.0%	2	K.ASLENSLEETK.G	2 2 2
	PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.R	2 2 2 2 2 2
	PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.R	1 1 1 1 1 1

YDR064W

15.2%

151

17029

10.4

RPS13 SGDID:S000002471, Chr IV from 579455-579475,580015-580449, Verified ORF, "Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S15 and rat S13 ribosomal proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08584.08584.2	3.7469	0.3341	100.0%	1138.1122	1138.2657	1	7.48	90.0%	1	K.GISSSAIPYSR.N	2
*	PARC_hx_14_03_itms.12123.12123.2	4.2865	0.3052	100.0%	1332.3722	1332.537	1	6.713	86.4%	3	K.LSSESVIEQIVK.Y	2

YCL009C

14.9%

309

33987

6.5

ILV6 SGDID:S000000515, Chr III from 105547-104618, reverse complement, Verified ORF, "Regulatory subunit of acetolactate synthase, which catalyzes the first step of branched-chain amino acid biosynthesis; enhances activity of the Ilv2p catalytic subunit, localizes to mitochondria"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09936.09936.2	3.7667	0.3548	100.0%	1578.3322	1578.7625	1	7.584	60.7%	1	N.SAVSSIIYETPAPSR.Q	2
*	PARC_hx_14_04_itms.11997.11997.2	4.2488	0.4356	100.0%	1695.7922	1695.8762	1	8.029	60.7%	1	R.GFNIDSLVVCNTEVK.D	2
*	PARC_hx_14_03_itms.09951.09951.2	3.8072	0.3495	100.0%	1744.4722	1745.0038	1	6.877	60.0%	1	R.MTIVLQGQDGVVEQAR.R	2

YJL012C

14.7%

721

83155

6.8

VTC4 SGDID:S000003549, Chr X from 413314-411149, reverse complement, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11169.11169.2	2.7571	0.2699	100.0%	1721.3722	1721.8604	1	5.277	58.3%	2	R.QYSYYYISYDDLK.T	2
*	PARC_hx_14_03_itms.09533.09533.2	2.2773	0.1125	99.6%	1079.5122	1079.2413	1	4.288	87.5%	1	K.ISQLYDIAR.T	2
*	PARC_hx_14_05_itms.15275.15275.2	3.8129	0.3765	100.0%	2499.6921	2499.6497	1	7.912	47.5%	1	R.EDSAITSIYFDNENLDLYYGR.L	2
*	PARC_hx_14_02_itms.09528.09528.2	2.4651	0.2187	99.9%	1070.7722	1071.2181	1	4.788	93.8%	1	K.YTVDQVFAK.M	2
*	PARC_hx_14_03_itms.09422.09422.2	2.969	0.1425	99.9%	1076.0521	1076.1973	1	5.801	88.9%	1	R.TAFQLPGDAR.V	2
*	PARC_hx_14_03_itms.11682.11682.2	4.2008	0.231	100.0%	1278.5922	1278.5066	1	6.096	80.0%	2	R.ISLDTELTMVR.E	2
*	PARC_hx_14_03_itms.12938.12938.2	2.493	0.1945	99.8%	1179.8922	1178.33	1	5.173	77.8%	1	R.TDIGVDWPFK.Q	2
*	PARC_hx_14_03_itms.10346.10346.2	3.9137	0.3992	100.0%	1680.7722	1681.8888	1	6.903	73.1%	5	K.LQTQLGQEPPEWVR.E	2
*	PARC_hx_14_02_itms.08264.08264.2	2.1469	0.2498	99.8%	1040.0122	1039.1332	116	4.499	68.8%	1	K.GTTFDTQIR.A	2

YOR291W

14.6%

1472

166749

6.1

YOR291W SGDID:S000005817, Chr XV from 861172-865590, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.09562.09562.2	5.1395	0.4612	100.0%	1746.7922	1746.9121	1	8.567	70.0%	1	R.LTESEPLVLSSAEQSR.S	2
*	PARC_hx_14_03_itms.08066.08066.2	2.3788	0.1185	99.7%	954.39215	954.07086	1	4.828	87.5%	1	R.IYGTGLSSR.R	2
*	PARC_hx_14_03_itms.11464.11464.2	1.8961	0.0103	97.6%	1299.2122	1298.4844	1	2.887	75.0%	1	K.SFLYNGTNIIR.A	2
*	PARC_hx_14_05_itms.15167.15167.2	5.0213	0.2684	100.0%	2373.9922	2371.6067	1	6.82	52.3%	4	K.TGTLTEDGLDVLGVQISEPNGVR.G	2
*	PARC_hx_14_03_itms.11620.11620.2	3.8505	0.1364	100.0%	1050.2922	1050.1998	1	5.683	93.8%	1	K.FGELLSDIR.Q	2
*	PARC_hx_14_03_itms.11847.11847.2	3.7995	0.3	100.0%	1530.4122	1530.6404	1	7.034	79.2%	2	K.FSLNDCSSPLDFK.S	2
*	PARC_hx_14_03_itms.12918.12918.2	3.8971	0.4137	100.0%	1489.5521	1490.6531	1	7.099	65.4%	3	R.SVDGNLLGDPLDFK.M	2
*	PARC_hx_14_03_itms.11012.11012.2	3.4577	0.2662	100.0%	1492.6522	1490.5688	1	5.393	81.8%	1	K.TNNDDVYWSFTK.G	2
*	PARC_hx_14_02_itms.09413.09413.2	3.4198	0.2923	100.0%	1317.4922	1317.448	4	5.847	59.1%	1	K.GAPEVISEICNK.S	2
*	PARC_hx_14_03_itms.12602.12602.2	3.2679	0.4064	100.0%	1377.6721	1377.537	1	7.395	77.3%	2	K.STLPADFEEVLR.C	2
*	PARC_hx_14_03_itms.09214.09214.2	1.7634	0.0486	98.2%	925.77216	926.0599	75	3.191	66.7%	1	R.TWLYSQK.V	2
*	PARC_hx_14_04_itms.10835.10835.2	3.9178	0.5295	100.0%	1632.1721	1631.7485	1	8.878	84.6%	2	R.ECNYTLAVSGDVFR.L	2
*	PARC_hx_14_05_itms.18740.18740.2	5.8018	0.4107	100.0%	2624.9722	2625.8486	1	7.963	57.1%	3	R.DENEIPEEYLNEILLNSSIYAR.M	2
*	PARC_hx_14_05_itms.18758.18758.3	3.0734	0.2974	100.0%	2625.5645	2625.8486	1	5.33	32.1%	1	R.DENEIPEEYLNEILLNSSIYAR.M	3
*	PARC_hx_14_03_itms.10464.10464.2	4.2422	0.394	100.0%	2036.5122	2034.1189	1	7.065	55.6%	1	K.LDYTVGFCGDGANDCGALK.A	2
*	PARC_hx_14_05_itms.15130.15130.2	4.2794	0.4961	100.0%	2122.872	2122.3367	1	8.402	52.4%	1	K.AADVGISLSEAEASVAAPFTSK.I	2

YGR193C

14.6%

410

45362

5.7

PDX1 SGDID:S000003425, Chr VII from 885746-884514, reverse complement, Verified ORF, "Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP) of the mitochondrial pyruvate dehydrogenase (PDH) complex, plays a structural role in the complex by binding and positioning E3 to the dihydrolipoamide acetyltransferase (E2) core"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.13892.13892.2	3.6868	0.4392	100.0%	1906.9321	1906.0967	1	7.393	64.7%	3	K.VGEPFSAGDVILEVETDK.S	2
*	PARC_hx_14_04_itms.15350.15350.2	5.62	0.5262	100.0%	2351.372	2348.566	1	9.593	50.0%	5	K.DVDVGEPIAYIADVDDDLATIK.L	2
*	PARC_hx_14_03_itms.10373.10373.2	3.7111	0.176	100.0%	1155.7122	1156.3392	1	5.525	88.9%	1	K.LSESLNSFMK.E	2
*	PARC_hx_14_04_itms.11505.11505.2	3.035	0.2434	100.0%	1242.4922	1242.4755	20	5.142	72.2%	1	K.FSYDLMQIPK.A	2

YOR036W

14.6%

288

33006

4.9

PEP12 SGDID:S000005562, Chr XV from 400347-401213, Verified ORF, "Target membrane receptor (t-SNARE) for vesicular intermediates traveling between the Golgi apparatus and the vacuole; controls entry of biosynthetic, endocytic, and retrograde traffic into the prevacuolar compartment; syntaxin"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11367.11367.2	4.538	0.1564	100.0%	1703.9521	1704.8363	1	7.447	65.4%	1	R.DVSYSFQEFQGIQR.Q	2
*	PARC_hx_14_03_itms.10971.10971.2	5.3253	0.3098	100.0%	2221.4521	2222.3757	1	7.905	67.6%	2	R.DPINNEEFAYQQNLIEQR.D	2
*	PARC_hx_14_03_itms.11342.11342.2	3.0931	0.2332	100.0%	1150.1921	1150.3171	1	6.097	83.3%	1	R.GITELNEVFK.D	2

U	YNL301C	2	3	14.5%	186	20563	11.7	RPL18B SGDID:S000005245, Chr XIV from 64562-64451,64018-63570, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl18Ap and has similarity to rat L18 ribosomal protein"
U	YOL120C	2	3	14.5%	186	20563	11.7	RPL18A SGDID:S000005480, Chr XV from 94401-94290,93842-93394, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl18Bp and has similarity to rat L18 ribosomal protein; intron of RPL18A pre-mRNA forms stem-loop structures that are a target for Rnt1p cleavage leading to degradation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.08631.08631.2	4.3711	0.3727	100.0%	1332.2122	1332.4967	1	8.502	79.2%	2	K.TVVVVGTVTDDAR.I	2
	PARC_hx_14_03_itms.10763.10763.2	3.9766	0.3547	100.0%	1503.0322	1503.6617	1	7.367	69.2%	1	K.AGGECITLDQLAVR.A	2

contaminant_KERATIN04

14.0%

458

49644

4.9

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08356.08356.1	2.3799	0.2501	100.0%	1301.64	1302.4241	3	5.376	54.5%	1	R.ALEEANADLEVK.I	1 1 1 1
	PARC_hx_14_02_itms.08423.08423.2	4.0735	0.3888	100.0%	1302.4321	1302.4241	1	7.703	81.8%	2	R.ALEEANADLEVK.I	2 2 2 2
	PARC_hx_14_03_itms.09760.09760.2	2.7253	0.2258	98.1%	1358.7722	1358.4972	1	5.088	72.7%	1	L.RQSVEADINGLR.R	2 2
	PARC_hx_14_02_itms.08974.08974.2	3.4642	0.2499	100.0%	1203.4922	1202.3097	1	5.874	85.0%	3	R.QSVEADINGLR.R	2 2
*	PARC_hx_14_05_itms.17210.17210.2	4.6977	0.4226	100.0%	2160.672	2158.4434	1	7.486	58.8%	1	K.TDLEMQIESLNEELAYMK.K	2
*	PARC_hx_14_02_itms.08130.08130.2	4.0855	0.1243	100.0%	1449.8922	1450.5115	1	7.496	75.0%	1	K.AGLENTVAETECR.Y	2
	PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.S	2 2 2 2 2 2
	PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.S	1 1 1 1 1 1

U	YNL302C	2	2	13.9%	144	15891	9.6	RPS19B SGDID:S000005246, Chr XIV from 62943-62924,62372-61958, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps19Ap and has similarity to rat S19 ribosomal protein"
U	YOL121C	2	2	13.9%	144	15917	9.6	RPS19A SGDID:S000005481, Chr XV from 92849-92830,92439-92025, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps19Bp and has similarity to rat S19 ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.11528.11528.2	2.5878	0.1827	99.8%	1232.4122	1232.4625	2	4.899	75.0%	1	K.LEVPGYVDIVK.T	2
	PARC_hx_14_03_itms.09610.09610.2	2.7108	0.1991	99.9%	956.2522	956.1705	1	4.765	93.8%	1	K.IGIVEISPK.G	2

YML012W

13.7%

211

24106

5.5

ERV25 SGDID:S000004473, Chr XIII from 246116-246751, Verified ORF, "Protein that forms a heterotrimeric complex with Erp1, Erp2p, and Emp24, member of the p24 family involved in endoplasmic reticulum to Golgi transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09737.09737.2	3.8897	0.3987	100.0%	1374.4521	1374.4906	1	6.993	75.0%	1	R.AIELDIESGAEAR.D	2
*	PARC_hx_14_04_itms.15129.15129.2	4.2653	0.4204	100.0%	1909.5322	1910.1254	1	8.713	70.0%	1	R.VEEITDEIVDELTYLK.N	2

YLL048C

13.5%

1661

189161

8.1

YBT1 SGDID:S000003971, Chr XII from 46264-41279, reverse complement, Verified ORF, "Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport; similar to mammalian bile transporters"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.15234.15234.2	4.1827	0.4295	100.0%	1597.0922	1597.7264	1	7.826	72.7%	2	R.FWFYDDVTQYGR.T	2
*	PARC_hx_14_03_itms.10864.10864.2	3.3501	0.2671	100.0%	1166.9122	1167.388	2	4.468	83.3%	1	K.SIIISEIYTK.A	2
*	PARC_hx_14_03_itms.09083.09083.2	3.7097	0.3252	100.0%	1062.1122	1062.2137	1	5.753	93.8%	1	K.LNEAFQAIR.I	2
*	PARC_hx_14_03_itms.11770.11770.2	3.2203	0.2855	100.0%	1379.4922	1379.468	1	5.893	77.8%	1	K.YFSWEENFEK.D	2
*	PARC_hx_14_02_itms.08612.08612.2	3.5187	0.1918	100.0%	1323.7122	1323.402	1	5.662	85.0%	1	R.VQDFLNENDTK.K	2
*	PARC_hx_14_04_itms.11288.11288.2	3.0035	0.1263	99.8%	1445.5122	1445.5713	1	5.895	72.7%	1	R.FAFENSTISWDK.D	2
*	PARC_hx_14_03_itms.08926.08926.2	3.3752	0.2439	100.0%	1142.4521	1142.3408	1	5.4	77.3%	1	K.LNVVIGPTGSGK.T	2
*	PARC_hx_14_03_itms.09432.09432.2	2.1052	0.1072	99.3%	979.9322	980.19543	3	3.744	75.0%	1	K.VVVPALEPR.Q	2
*	PARC_hx_14_05_itms.13449.13449.2	3.9618	0.296	100.0%	1536.5322	1536.6873	2	5.634	70.8%	2	K.NNILFNSPFNEAR.Y	2
*	PARC_hx_14_03_itms.08820.08820.2	2.419	0.2294	99.8%	1205.5322	1204.366	1	4.369	68.2%	1	K.SSTSLSNLPAVK.E	2
*	PARC_hx_14_03_itms.08702.08702.2	2.2549	0.2136	99.8%	1011.7522	1012.11	1	4.319	68.8%	1	R.FFDATPTGR.I	2
*	PARC_hx_14_03_itms.10432.10432.2	3.7055	0.2351	100.0%	1458.5922	1458.6115	1	5.562	70.8%	1	K.IDNIDISGVDLQR.L	2
*	PARC_hx_14_05_itms.14918.14918.2	3.7827	0.3963	100.0%	1831.5922	1832.1473	1	6.506	62.5%	1	R.SITIIPQDPTLFSGTIK.T	2
*	PARC_hx_14_02_itms.10046.10046.2	3.692	0.3369	100.0%	1472.5122	1472.5077	1	6.451	77.3%	1	K.TNLDPYDEFSDR.Q	2
*	PARC_hx_14_03_itms.09520.09520.2	4.7108	0.3491	100.0%	1687.8722	1686.8625	1	6.411	82.1%	3	R.VNLISEEQLQQGATR.E	2
*	PARC_hx_14_05_itms.12792.12792.3	4.2224	0.2128	100.0%	3185.6643	3186.3298	1	5.379	29.3%	3	A.SSTNSENVNKFLDLSSEISEGGSNLSQGQR.Q	3
*	PARC_hx_14_03_itms.11650.11650.2	6.2152	0.4643	100.0%	2124.5723	2125.2566	1	7.805	68.4%	4	K.FLDLSSEISEGGSNLSQGQR.Q	2
*	PARC_hx_14_05_itms.14163.14163.2	2.9994	0.3524	100.0%	1925.5521	1926.1278	1	6.649	52.9%	1	K.IILLDEATASIDYSSDAK.I	2

contaminant_KERATIN10

13.5%

400

44106

5.1

no description

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_02_itms.08042.08042.1	2.2357	0.1086	100.0%	809.57	809.93774	58	4.498	75.0%	1	R.LASYLDK.V	1 1 1 1 1 1 1
PARC_hx_14_02_itms.08054.08054.2	2.3258	0.2092	99.9%	810.1922	809.93774	17	4.529	83.3%	1	R.LASYLDK.V	2 2 2 2 2 2 2
PARC_hx_14_02_itms.08096.08096.1	1.5483	0.0917	96.0%	807.65	807.8815	8	3.177	66.7%	1	R.LAADDFR.T	1 1 1 1 1 1
PARC_hx_14_02_itms.08120.08120.2	2.3822	0.1835	99.8%	808.1922	807.8815	1	4.905	91.7%	1	R.LAADDFR.T	2 2 2 2 2 2
PARC_hx_14_02_itms.09828.09828.2	2.4431	0.0555	99.2%	1207.3922	1205.3716	3	3.645	70.0%	2	R.MSVEADINGLR.R	2 2
PARC_hx_14_02_itms.10118.10118.2	3.9459	0.2635	100.0%	1030.4122	1030.2096	1	5.89	93.8%	3	R.VLDELTLAR.T	2 2 2 2 2
PARC_hx_14_02_itms.10984.10984.2	4.1138	0.3231	100.0%	1277.0122	1277.4755	2	5.651	85.0%	2	R.TDLEMQIEGLK.E	2 2
PARC_hx_14_02_itms.08073.08073.2	3.5974	0.1969	100.0%	1123.0322	1123.2511	1	5.268	93.8%	1	R.LEQEIATYR.S	2 2 2 2 2 2
PARC_hx_14_02_itms.08094.08094.1	2.344	0.1485	100.0%	1123.62	1123.2511	1	3.607	75.0%	1	R.LEQEIATYR.S	1 1 1 1 1 1

U	YBL072C	2	2	13.5%	200	22490	10.7	RPS8A SGDID:S000000168, Chr II from 89123-88521, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps8Ap and has similarity to rat S8 ribosomal protein"
U	YER102W	2	2	13.5%	200	22490	10.7	RPS8B SGDID:S000000904, Chr V from 363096-363698, Verified ORF, "Protein component of the small (40S) ribosomal subunit; identical to Rps8Bp and has similarity to rat S8 ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.10848.10848.2	3.4587	0.3776	100.0%	1626.4922	1626.7631	1	7.665	53.6%	1	R.IETGNFSWASEGISK.K	2
	PARC_hx_14_04_itms.10594.10594.2	3.6397	0.3882	100.0%	1302.5322	1302.5162	2	6.596	68.2%	1	K.AAIVQIDATPFR.Q	2

U	YMR242C	2	4	13.5%	178	21236	10.3	RPL20A SGDID:S000004855, Chr XIII from 754196-754178,753741-753224, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein"
U	YOR312C	2	4	13.8%	174	20713	10.3	RPL20B SGDID:S000005839, Chr XV from 901176-901170,900762-900245, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similarity to rat L18a ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.08730.08730.2	3.0789	0.1035	99.8%	1092.3522	1092.2804	2	4.608	77.8%	1	R.IFASNEVIAK.S	2
	PARC_hx_14_03_itms.12112.12112.2	4.3479	0.5054	100.0%	1538.6721	1538.7589	1	9.123	76.9%	3	R.VAAVETLYQDMAAR.H	2

YLL029W

13.4%

749

84924

6.9

YLL029W SGDID:S000003952, Chr XII from 81460-83709, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10506.10506.2	3.1493	0.097	99.8%	1121.6522	1122.3221	1	4.878	83.3%	2	R.SSSMLLNELK.G	2
*	PARC_hx_14_03_itms.10103.10103.2	2.624	0.062	99.3%	1500.1122	1500.5645	9	4.674	54.2%	2	R.DLLNFNDDHPDGK.S	2
*	PARC_hx_14_04_itms.12148.12148.2	2.6588	0.2817	100.0%	1452.3121	1451.622	1	5.373	75.0%	4	R.QELDYNWTLLR.Q	2
*	PARC_hx_14_03_itms.12328.12328.2	4.1963	0.3863	100.0%	1864.3322	1861.9745	1	7.086	65.4%	3	R.QNEDPITWQEWCVR.E	2
*	PARC_hx_14_03_itms.08910.08910.2	2.4684	0.1684	99.8%	1186.2722	1186.2659	1	4.537	75.0%	1	K.YEFHGEEFK.D	2
*	PARC_hx_14_05_itms.13395.13395.2	5.3871	0.4662	100.0%	2177.872	2177.3386	1	7.946	72.2%	2	K.IYLCDSGSQFLEGTTDITR.T	2
*	PARC_hx_14_02_itms.10626.10626.2	2.7448	0.2788	100.0%	1354.9922	1355.5458	19	5.187	60.0%	1	K.EEMDNYTLVLK.G	2
*	PARC_hx_14_02_itms.08681.08681.2	3.5367	0.2622	100.0%	1426.4722	1426.5687	4	5.856	58.3%	1	R.AGNIISNEPGYYK.D	2

YDR089W

13.2%

869

98712

5.5

YDR089W SGDID:S000002496, Chr IV from 622107-624716, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08966.08966.2	1.5684	0.0132	97.0%	1091.9321	1091.2084	20	2.641	71.4%	1	K.FYNINYEK.L	2
*	PARC_hx_14_05_itms.14361.14361.2	3.9725	0.3345	100.0%	1440.1322	1438.661	1	7.475	79.2%	2	R.ILSVESSIIDFSK.G	2
*	PARC_hx_14_05_itms.14985.14985.2	3.6937	0.4371	100.0%	2623.912	2624.864	1	8.669	43.2%	1	K.LLNEFPQDSENPLTASEYVTSIR.N	2
*	PARC_hx_14_03_itms.12758.12758.2	5.3749	0.4529	100.0%	1698.6122	1698.9258	1	8.188	78.6%	2	K.MIDSSLEFDTALIDK.A	2
*	PARC_hx_14_03_itms.12120.12120.2	3.3988	0.1773	100.0%	1350.6921	1351.5396	1	4.665	81.8%	1	R.FLLSSEDIEGLK.F	2
*	PARC_hx_14_02_itms.08339.08339.2	4.0319	0.3609	100.0%	1605.5122	1605.6989	1	6.987	78.6%	1	K.EILDTTDNINSAGNK.S	2
*	PARC_hx_14_03_itms.08648.08648.2	3.3309	0.2959	100.0%	1300.3922	1300.4545	1	5.217	77.3%	1	K.NILPSAVQSNEK.Y	2
*	PARC_hx_14_04_itms.12866.12866.2	5.1643	0.4056	100.0%	1912.6721	1913.0477	1	7.042	75.0%	4	K.LNSDDSLSPDEFFQLGK.D	2

U	YGL076C	2	5	13.1%	244	27638	10.1	RPL7A SGDID:S000003044, Chr VII from 365999-365989,365529-365436,364967-364338, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)"
U	YPL198W	2	5	13.1%	244	27696	10.1	RPL7B SGDID:S000006119, Chr XVI from 173151-173161,173571-173664,174072-174701, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_05_itms.13464.13464.2	3.2243	0.2589	100.0%	1992.3121	1993.2665	1	6.038	56.2%	1	K.LIEPYVAYGYPSYSTIR.Q	2
	PARC_hx_14_03_itms.10862.10862.2	4.8237	0.3227	100.0%	1554.7122	1554.7838	1	8.22	71.4%	4	R.VPLSDNAIIEANLGK.Y	2

YDL010W

13.0%

231

25783

6.4

YDL010W SGDID:S000002168, Chr IV from 432327-433022, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12372.12372.2	1.843	0.1188	98.5%	1841.4521	1842.0996	2	4.177	41.2%	1	K.VGLQQPIASVDDSLSAIK.N	2
*	PARC_hx_14_04_itms.11453.11453.2	2.9432	0.1773	99.9%	1375.5322	1375.5645	1	4.845	68.2%	1	K.LLESLQVWSDGK.F	2

YDR468C

12.9%

224

25817

4.6

TLG1 SGDID:S000002876, Chr IV from 1398690-1398016, reverse complement, Verified ORF, "Essential t-SNARE that forms a complex with Tlg2p and Vti1p and mediates fusion of endosome-derived vesicles with the late Golgi; binds the docking complex VFT (Vps fifty-three) through interaction with Vps51p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10881.10881.2	4.7996	0.4602	100.0%	2071.5322	2071.1187	1	9.204	64.7%	4	R.HNTAGDDDQEEEIQDILK.D	2
*	PARC_hx_14_02_itms.11013.11013.2	3.7866	0.3954	100.0%	1304.1122	1304.3965	1	6.842	85.0%	1	K.DVEETIVDLDR.S	2

YLR342W

12.7%

1876

214849

7.2

FKS1 SGDID:S000004334, Chr XII from 809997-815627, Verified ORF, "Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_02_itms.09047.09047.2	4.3283	0.4471	100.0%	1437.5122	1437.5059	1	8.097	83.3%	1	K.IEGDNSLEAADFR.W	2
*	PARC_hx_14_03_itms.08801.08801.2	3.0775	0.1161	99.9%	1087.9321	1088.2671	38	3.448	87.5%	1	K.MNQLSPLER.V	2
	PARC_hx_14_03_itms.10242.10242.2	2.7048	0.204	98.2%	1346.5521	1346.4949	1	5.2	75.0%	1	Y.LLCWGEANQVR.F	2
*	PARC_hx_14_03_itms.11472.11472.2	1.9354	0.0429	98.3%	1112.4922	1112.3115	118	2.927	68.8%	1	K.LIELPLEER.Y	2
*	PARC_hx_14_05_itms.16702.16702.2	3.9622	0.3345	100.0%	1440.0721	1440.6384	1	6.801	86.4%	3	R.LGDVVWDDVFFK.T	2
	PARC_hx_14_05_itms.16280.16280.2	4.2554	0.4459	100.0%	2408.7322	2409.5732	1	8.286	55.3%	2	R.APTFFVSQDDNNFETEFFPR.D	2
*	PARC_hx_14_03_itms.08718.08718.2	4.1582	0.3994	100.0%	2538.4922	2538.6814	1	7.342	47.7%	1	K.ILAEETAAYEGNENEAEKEDALK.S	2
	PARC_hx_14_05_itms.15698.15698.2	4.3137	0.354	100.0%	1703.9722	1703.8982	1	6.542	76.9%	1	K.SQIDDLPFYCIGFK.S	2
*	PARC_hx_14_04_itms.12066.12066.2	4.8937	0.457	100.0%	2092.5322	2090.3154	1	8.529	63.9%	4	R.VENPEIVQMFGGNAEGLER.E	2
*	PARC_hx_14_03_itms.13330.13330.3	3.3725	0.2955	100.0%	2645.8145	2646.867	1	5.121	31.8%	1	R.AYPDLQIAYLDEEPPLTEGEEPR.I	3
*	PARC_hx_14_03_itms.13352.13352.2	5.2669	0.3501	100.0%	2645.9521	2646.867	1	7.84	50.0%	4	R.AYPDLQIAYLDEEPPLTEGEEPR.I	2
	PARC_hx_14_03_itms.09604.09604.2	4.3445	0.3931	100.0%	1298.0922	1298.4819	1	6.416	79.2%	1	R.VQLSGNPILGDGK.S	2
	PARC_hx_14_05_itms.14691.14691.2	5.7641	0.467	100.0%	2429.132	2429.6086	1	8.683	63.2%	2	R.GEYIQLIDANQDNYLEECLK.I	2
	PARC_hx_14_05_itms.13205.13205.2	4.6633	0.564	100.0%	1856.7122	1857.027	1	9.524	61.8%	2	R.EYIFSENSGVLGDVAAGK.E	2
	PARC_hx_14_03_itms.11372.11372.2	2.5658	0.2755	100.0%	1170.4122	1170.3103	1	5.606	77.8%	2	K.EQTFGTLFAR.T	2
	PARC_hx_14_03_itms.09236.09236.2	3.5876	0.3381	100.0%	1250.2322	1250.4736	1	6.735	77.3%	1	K.IGAGMGEQMLSR.E	2
*	PARC_hx_14_03_itms.11332.11332.2	3.5244	0.3303	100.0%	1617.5322	1617.7985	1	6.383	70.8%	1	R.EYYYLGTQLPVDR.F	2

YLR340W

12.5%

312

33717

4.8

RPP0 SGDID:S000004332, Chr XII from 805887-806825, Verified ORF, "Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphorylated on serine 302"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.13478.13478.2	2.8491	0.174	99.9%	1268.3121	1268.4088	11	4.41	70.0%	2	R.GFLSDLPDFEK.L	2
*	PARC_hx_14_05_itms.14378.14378.2	4.582	0.3466	100.0%	1765.4521	1766.0038	1	8.024	70.0%	3	K.GNVGFVFTNEPLTEIK.N	2
*	PARC_hx_14_03_itms.10818.10818.2	2.7041	0.2332	99.9%	1284.7522	1284.4575	2	5.106	63.6%	1	R.AGAVAPEDIWVR.A	2

YKL212W

12.4%

623

71125

7.7

SAC1 SGDID:S000001695, Chr XI from 34544-36415, Verified ORF, "Lipid phosphoinositide phosphatase of the ER and Golgi, involved in protein trafficking and secretion"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10548.10548.2	2.7543	0.0184	99.0%	1601.5521	1601.84	14	3.848	53.6%	1	R.VLGAEEFPVQGEVVK.I	2
*	PARC_hx_14_03_itms.12262.12262.2	4.3427	0.0685	99.9%	2547.872	2548.6794	1	4.793	45.5%	1	K.DGNVGNFNETEQILLAENPESEK.I	2
*	PARC_hx_14_05_itms.14464.14464.2	4.2097	0.2825	100.0%	1783.3522	1782.9908	1	6.566	60.7%	1	K.ELYGDNYLVNLVNQK.G	2
*	PARC_hx_14_05_itms.13413.13413.2	3.7326	0.3661	100.0%	1412.0721	1412.5449	1	8.04	75.0%	1	R.LGAFNDFLNSASR.Y	2
*	PARC_hx_14_03_itms.08585.08585.2	2.5939	0.2815	100.0%	1413.9722	1414.4764	1	5.093	70.0%	1	R.YYQNNWTDGPR.Q	2

YML123C

12.3%

587

64382

6.4

PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12284.12284.2	5.2106	0.4184	100.0%	1937.0922	1936.1284	1	8.048	68.8%	5	R.LALESIDDEGFGWQQVK.T	2
*	PARC_hx_14_02_itms.08102.08102.1	2.3246	0.1692	100.0%	950.56	951.0672	1	4.552	78.6%	1	R.YQLDVNAK.L	1
*	PARC_hx_14_02_itms.08090.08090.2	2.2618	0.0866	99.5%	951.1322	951.0672	12	3.177	92.9%	1	R.YQLDVNAK.L	2
*	PARC_hx_14_02_itms.08192.08192.2	5.2152	0.5044	100.0%	1473.7922	1473.5798	1	8.329	88.5%	1	K.LELAAAAQEQDGEK.K	2
*	PARC_hx_14_02_itms.08064.08064.2	3.3272	0.3459	100.0%	1601.1721	1601.7539	1	6.481	50.0%	2	K.LELAAAAQEQDGEKK.I	2
*	PARC_hx_14_03_itms.09195.09195.2	4.6879	0.489	100.0%	1817.6522	1816.9373	1	8.455	73.3%	3	K.IHDTSDEDMAINGLER.A	2
*	PARC_hx_14_02_itms.07941.07941.2	4.3762	0.441	100.0%	1757.1322	1756.7802	1	8.451	66.7%	1	K.NNDIESSSPSQLQHEA.-	2

YLR220W

12.1%

322

34250

5.1

CCC1 SGDID:S000004210, Chr XII from 576827-577795, Verified ORF, "Putative vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack the ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09177.09177.2	3.1935	0.0864	99.7%	987.47217	986.19977	1	5.664	87.5%	1	K.NAVVTLIQK.A	2
*	PARC_hx_14_02_itms.09263.09263.2	3.505	0.4737	100.0%	1705.4922	1705.8192	1	8.511	50.0%	1	K.GSGGTSELGGSESTPLLR.G	2
*	PARC_hx_14_04_itms.11277.11277.2	3.3849	0.3123	100.0%	1351.0122	1351.5046	1	5.452	77.3%	2	K.ANLGFFQSVDPR.V	2

YGR282C

12.1%

313

34119

4.5

BGL2 SGDID:S000003514, Chr VII from 1058730-1057789, reverse complement, Verified ORF, "Endo-beta-1,3-glucanase, major protein of the cell wall, involved in cell wall maintenance"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10162.10162.2	3.6791	0.2504	100.0%	1487.8322	1485.5878	1	5.161	75.0%	1	K.STSDYETELQALK.S	2
*	PARC_hx_14_03_itms.09573.09573.2	1.7132	0.1423	98.9%	1004.3122	1005.2022	16	3.485	62.5%	1	K.AALQTYLPK.I	2
*	PARC_hx_14_05_itms.14920.14920.2	4.3397	0.4415	100.0%	1701.1522	1699.9011	1	9.096	60.0%	1	K.ESTVAGFLVGSEALYR.N	2

YBR014C

11.8%

203

22565

6.0

YBR014C SGDID:S000000218, Chr II from 267336-266725, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.10944.10944.2	2.7177	0.3302	100.0%	1410.3322	1410.7297	1	6.39	63.6%	1	K.IMEQSPMIVFSK.T	2
*	PARC_hx_14_03_itms.09209.09209.2	2.1747	0.2122	99.7%	1214.7322	1214.4075	1	4.85	68.2%	1	R.TVPNVIIGGTSR.G	2

YMR202W

11.7%

222

24896

5.9

ERG2 SGDID:S000004815, Chr XIII from 667536-668204, Verified ORF, "C-8 sterol isomerase, catalyzes the isomerization of the delta-8 double bond to the delta-7 position at an intermediate step in ergosterol biosynthesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09227.09227.2	2.5826	0.0605	99.3%	1378.1322	1378.5316	7	3.725	59.1%	1	K.TLNEICNSVISK.H	2
*	PARC_hx_14_03_itms.08884.08884.2	4.334	0.4888	100.0%	1625.2922	1624.7068	1	8.128	69.2%	1	R.DALASHYGDEYINR.Y	2

YFL005W

11.6%

215

23506

7.1

SEC4 SGDID:S000001889, Chr VI from 130329-130976, Verified ORF, "Secretory vesicle-associated Rab GTPase essential for exocytosis; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10486.10486.2	2.2938	0.1034	99.3%	1071.6721	1072.2902	1	3.476	85.0%	1	K.ILLIGDSGVGK.S	2
*	PARC_hx_14_04_itms.13144.13144.2	3.9774	0.2862	100.0%	1640.2522	1640.7899	1	5.948	65.4%	3	K.NDDNVNEIFFTLAK.L	2

YJL172W

11.3%

576

64597

5.5

CPS1 SGDID:S000003708, Chr X from 97731-99461, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08321.08321.2	3.0408	0.3839	100.0%	1394.6921	1393.4521	1	6.412	72.7%	1	K.NPNPADDPDFYK.H	2
*	PARC_hx_14_04_itms.14834.14834.2	5.3308	0.3775	100.0%	2318.672	2319.4988	1	7.379	55.0%	6	R.YGDDGIYSIIDEGEGIMEVDK.D	2
*	PARC_hx_14_02_itms.09599.09599.2	3.3667	0.2322	100.0%	1305.3522	1304.4857	1	4.969	68.2%	1	K.DVFVATPINAEK.G	2
*	PARC_hx_14_02_itms.09050.09050.2	3.9005	0.2848	100.0%	1315.9722	1316.4973	1	6.283	70.8%	1	R.TTQAVDIINGGVK.A	2
*	PARC_hx_14_04_itms.09819.09819.1	1.9909	0.0376	95.9%	973.49	974.1039	4	3.496	75.0%	1	K.YYWNLSK.N	1

YNL112W

11.2%

546

60999

8.8

DBP2 SGDID:S000005056, Chr XIV from 413641-414913,415916-416283, Verified ORF, "Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated mRNA decay and rRNA processing"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08632.08632.2	2.1751	0.0107	98.3%	1100.3121	1100.2603	36	3.818	65.0%	1	R.GSEIVIATPGR.L	2
*	PARC_hx_14_02_itms.10486.10486.2	3.7288	0.2957	100.0%	1294.7122	1294.4473	1	6.374	80.0%	1	R.VTYLVLDEADR.M	2
	PARC_hx_14_03_itms.11822.11822.2	3.6479	0.2901	100.0%	1337.4521	1337.5946	1	6.932	80.0%	1	R.MLDMGFEPQIR.K	2 2
*	PARC_hx_14_03_itms.09221.09221.2	3.6752	0.442	100.0%	1232.0122	1231.4528	1	7.989	86.4%	1	R.SPIMVATDVAAR.G	2
*	PARC_hx_14_04_itms.10977.10977.2	4.0817	0.4621	100.0%	1643.6122	1643.7936	1	8.427	60.0%	2	R.AGATGTAISFFTEQNK.G	2

Similarities: YOR204W(1:4)

YLR262C

11.2%

215

24413

5.8

YPT6 SGDID:S000004252, Chr XII from 668893-668246, reverse complement, Verified ORF, "GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10337.10337.2	3.4171	0.2666	100.0%	1147.4922	1147.3599	1	5.717	85.0%	1	K.IVFLGEQGVGK.T	2
*	PARC_hx_14_03_itms.12308.12308.2	3.9959	0.2713	100.0%	1431.3922	1431.5951	1	5.172	75.0%	1	R.GDENVILCIVGNK.S	2

YLR205C

11.0%

317

37179

7.8

HMX1 SGDID:S000004195, Chr XII from 553679-552726, reverse complement, Verified ORF, "ER localized, heme-binding peroxidase involved in the degradation of heme; does not exhibit heme oxygenase activity despite similarity to heme oxygenases; expression regulated by AFT1"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12429.12429.2	4.3233	0.4839	100.0%	2044.0922	2044.3068	1	7.975	61.8%	2	R.LLNDPVTEEELQTSTILK.Q	2
*	PARC_hx_14_04_itms.12572.12572.2	2.1199	0.1234	99.0%	1917.5721	1920.0422	2	4.109	46.9%	1	K.GTNFFTFSDLGPTEETR.L	2

YDL185W

10.9%

1071

118637

6.2

TFP1 SGDID:S000002344, Chr IV from 126788-130003, Verified ORF, "Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites; protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI), which is a site-specific endonuclease"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12090.12090.2	4.0831	0.4159	100.0%	2363.4922	2364.596	1	8.222	50.0%	1	K.GTNVLMADGSIECIENIEVGNK.V	2
*	PARC_hx_14_02_itms.08279.08279.2	2.4225	0.3053	100.0%	1084.5521	1085.2604	1	6.176	81.2%	1	R.ETMYSVVQK.S	2
*	PARC_hx_14_02_itms.07872.07872.2	2.2724	0.3051	100.0%	1134.6522	1135.2188	1	6.044	88.9%	1	K.SYPISEGPER.A	2
*	PARC_hx_14_02_itms.08115.08115.2	3.0679	0.2299	100.0%	1082.3121	1081.1704	1	5.385	93.8%	1	R.ANELVESYR.K	2
*	PARC_hx_14_05_itms.22773.22773.2	3.2196	0.2683	100.0%	2230.2722	2229.5408	1	6.191	50.0%	2	R.NNLNTENPLWDAIVGLGFLK.D	2
*	PARC_hx_14_05_itms.12632.12632.2	4.1053	0.3415	100.0%	1535.5721	1535.697	1	6.522	84.6%	5	K.NIPSFLSTDNIGTR.E	2
*	PARC_hx_14_02_itms.08993.08993.1	1.7922	0.1335	98.0%	830.7	830.95966	57	3.632	71.4%	1	R.DGLVSLAR.S	1
*	PARC_hx_14_05_itms.14698.14698.2	2.953	0.1865	99.9%	1274.9521	1274.4589	4	4.397	77.8%	2	R.GFYFELQELK.E	2
*	PARC_hx_14_03_itms.08789.08789.2	3.8549	0.1787	100.0%	1546.0322	1546.782	1	6.014	71.4%	1	R.TTLVANTSNMPVAAR.E	2

YGL008C

10.7%

918

99619

5.1

PMA1 SGDID:S000002976, Chr VII from 482671-479915, reverse complement, Verified ORF, "Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plasma membrane potential; part of the P2 subgroup of cation-transporting ATPases"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12183.12183.2	4.1089	0.3075	100.0%	2480.7522	2481.7156	1	7.199	54.8%	2	R.PVPEEYLQTDPSYGLTSDEVLK.R	2
*	PARC_hx_14_03_itms.08808.08808.2	3.2786	0.2487	100.0%	1058.3121	1058.2664	1	5.964	94.4%	1	K.TLANTAVVIR.D	2
*	PARC_hx_14_05_itms.14967.14967.2	2.9094	0.2731	100.0%	2654.8523	2653.9092	2	5.757	32.6%	1	R.IVTEDCFLQIDQSAITGESLAVDK.H	2
	PARC_hx_14_03_itms.09927.09927.2	2.7272	0.3841	100.0%	1449.5322	1449.6066	1	6.858	58.3%	1	R.QLGLGTNIYNAER.L	2
	PARC_hx_14_03_itms.10994.10994.2	3.9925	0.4729	100.0%	1809.8322	1809.0442	1	8.22	58.8%	1	R.GYLVAMTGDGVNDAPSLK.K	2
	PARC_hx_14_03_itms.12316.12316.2	3.9402	0.4846	100.0%	1285.8722	1285.4756	1	8.075	80.0%	1	R.SVEDFMAAMQR.V	2

YIL117C

10.7%

318

34651

7.1

PRM5 SGDID:S000001379, Chr IX from 141566-140610, reverse complement, Verified ORF, "Pheromone-regulated protein, predicted to have 1 transmembrane segment; induced during cell integrity signaling"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10642.10642.2	1.979	0.088	98.9%	1221.5922	1221.3556	62	3.521	65.0%	1	R.PLFSLASESNR.N	2
*	PARC_hx_14_05_itms.13929.13929.2	3.6297	0.2837	100.0%	1571.5122	1568.81	1	4.917	69.2%	3	R.NSLFISPTGDILYK.T	2
*	PARC_hx_14_03_itms.08717.08717.2	3.3195	0.3155	100.0%	957.9522	958.146	1	5.596	87.5%	1	K.GNLLVVQSK.R	2

U	YDL082W	2	2	10.6%	199	22554	11.2	RPL13A SGDID:S000002240, Chr IV from 308424-308427,308793-309388, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp; not essential for viability; has similarity to rat L13 ribosomal protein"
U	YMR142C	2	2	10.6%	199	22525	11.1	RPL13B SGDID:S000004750, Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_03_itms.08122.08122.2	3.162	0.325	100.0%	964.9322	965.0971	1	6.474	77.8%	1	K.AAGLTAAYAR.T	2
	PARC_hx_14_02_itms.08595.08595.2	3.8541	0.3182	100.0%	1334.3722	1334.4313	1	6.284	85.0%	1	R.NQEIFDANVQR.L	2

YLR197W

10.5%

504

56864

8.9

SIK1 SGDID:S000004187, Chr XII from 546099-547613, Verified ORF, "Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14600.14600.2	5.1372	0.5196	100.0%	2217.5122	2218.3794	1	9.406	57.1%	2	K.GAAEALENANDISEGLVSESLK.A	2
*	PARC_hx_14_03_itms.12218.12218.2	3.7315	0.3337	100.0%	1897.9922	1899.0642	3	6.012	43.8%	2	R.IDNYSEEPSNVFGSVLK.K	2
*	PARC_hx_14_04_itms.12028.12028.2	4.8709	0.3792	100.0%	1667.1721	1666.8866	1	7.574	84.6%	2	K.NELAIQEAMELYNK.D	2

YNL178W

10.4%

240

26503

9.4

RPS3 SGDID:S000005122, Chr XIV from 302682-303404, Verified ORF, "Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08591.08591.2	2.6307	0.1487	99.7%	1439.3121	1438.5339	23	4.507	58.3%	1	R.ELAEEGYSGVEVR.V	2
*	PARC_hx_14_03_itms.10740.10740.2	3.0374	0.4492	100.0%	1353.6522	1353.5608	1	7.039	72.7%	1	K.YAPGTIVLYAER.V	2

YJL198W

10.3%

881

97689

7.1

PHO90 SGDID:S000003734, Chr X from 60843-63488, Verified ORF, "Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14588.14588.2	3.6731	0.4043	100.0%	2612.8323	2612.8096	1	7.159	39.1%	2	K.NLIYTLQTDELQVGDNEEGFGAGK.S	2
*	PARC_hx_14_03_itms.11418.11418.2	2.6321	0.2444	99.9%	1345.5721	1345.4924	1	5.879	68.2%	1	K.DAGIVEETIELR.E	2
*	PARC_hx_14_03_itms.11555.11555.2	3.9303	0.2707	100.0%	1371.3522	1371.5298	5	5.049	80.0%	1	R.TELIESEQFFK.D	2
*	PARC_hx_14_04_itms.12983.12983.2	4.4775	0.2023	100.0%	1846.5322	1844.0282	1	4.661	66.7%	4	K.DTYAFQAETIELLNSK.I	2
*	PARC_hx_14_05_itms.16214.16214.2	4.4563	0.3173	100.0%	1631.7922	1631.8817	1	5.959	71.4%	2	K.DMLGLLSQADELTPK.E	2
*	PARC_hx_14_03_itms.10473.10473.2	3.6697	0.2751	100.0%	1235.7522	1234.4355	1	6.212	79.2%	1	K.AVSSSGLLSTIAK.A	2

YDR135C

10.2%

1515

171120

8.4

YCF1 SGDID:S000002542, Chr IV from 727546-722999, reverse complement, Verified ORF, "Vacuolar glutathione S-conjugate transporter of the ATP-binding cassette family, has a role in detoxifying metals such as cadmium, mercury, and arsenite; also transports unconjugated bilirubin; similar to human cystic fibrosis protein CFTR"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.07948.07948.2	2.017	0.0836	99.0%	1131.1522	1131.187	38	3.435	68.8%	1	K.FVTDYNSER.Q	2
*	PARC_hx_14_05_itms.12448.12448.2	3.0221	0.1624	99.9%	1108.6721	1108.3231	2	5.915	72.2%	1	K.SALTALIYQK.S	2
*	PARC_hx_14_05_itms.12323.12323.2	3.4528	0.1483	100.0%	1143.3722	1143.369	1	4.466	88.9%	1	R.VISEILNNIK.S	2
*	PARC_hx_14_05_itms.15284.15284.2	3.9401	0.3025	100.0%	2071.9722	2072.2817	1	5.522	62.5%	4	R.LFTFFTNEELQPDSVQR.L	2
*	PARC_hx_14_03_itms.11210.11210.2	3.6614	0.2978	100.0%	1687.5122	1686.8566	1	6.141	64.3%	3	R.ESSIPVEGELEQLQK.L	2
*	PARC_hx_14_05_itms.13682.13682.2	4.063	0.3765	100.0%	1468.5322	1468.7106	1	7.877	70.8%	2	R.APMTFFETTPIGR.I	2
*	PARC_hx_14_04_itms.10397.10397.2	3.7397	0.4132	100.0%	1827.7522	1828.0093	1	6.821	63.3%	1	R.IDNNMSAFYPSINANR.W	2
*	PARC_hx_14_04_itms.11486.11486.2	3.8767	0.3591	100.0%	1791.6122	1790.0262	1	6.162	66.7%	1	K.LSIIPQDSQVFEGTVR.E	2
*	PARC_hx_14_03_itms.12638.12638.2	5.2537	0.5046	100.0%	1978.2322	1978.1252	1	9.151	80.0%	2	R.ENIDPINQYTDEAIWR.A	2
*	PARC_hx_14_04_itms.12108.12108.2	5.3927	0.6068	100.0%	1802.8922	1803.0166	1	9.864	71.9%	3	K.ILVLDEATAAVDVETDK.V	2
*	PARC_hx_14_02_itms.10634.10634.2	4.6064	0.3742	100.0%	1620.5122	1620.7563	1	7.206	67.9%	2	K.VAEFDSPGQLLSDNK.S	2

YDL077C

10.1%

1049

122881

7.1

VAM6 SGDID:S000002235, Chr IV from 320120-316971, reverse complement, Verified ORF, "Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by facilitating guanine nucleotide exchange on small guanosine triphosphatase Ypt7p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09596.09596.2	2.133	0.0183	98.5%	1201.4321	1202.3857	6	3.211	83.3%	1	K.NMMEASLSYR.K	2
*	PARC_hx_14_04_itms.12051.12051.2	5.314	0.4171	100.0%	2172.5122	2173.3992	1	9.029	63.2%	3	R.YTFELDGNDATPMIIDGATK.K	2
*	PARC_hx_14_03_itms.14076.14076.2	5.5576	0.4331	100.0%	2012.3522	2010.1187	1	7.847	65.6%	4	K.FLTDLVDELENDNTDQK.Q	2
*	PARC_hx_14_03_itms.10037.10037.2	3.2282	0.4133	100.0%	1395.2922	1395.5522	1	6.874	72.7%	1	K.SLLETTSVYEPR.T	2
*	PARC_hx_14_05_itms.13712.13712.2	4.3472	0.3489	100.0%	2417.8523	2417.6782	1	6.463	50.0%	1	K.LLNDAIESGSDQLPTNQLNFVK.Y	2
*	PARC_hx_14_03_itms.12090.12090.2	1.6832	0.0251	97.1%	1504.8121	1504.683	11	3.076	50.0%	1	K.NLPQDISLYDIGR.V	2
*	PARC_hx_14_03_itms.11115.11115.2	3.9967	0.3276	100.0%	1344.3322	1344.5077	1	5.954	77.3%	2	K.TLGEVINELNNK.-	2

contaminant_KERATIN14

9.7%

638

65871

8.1

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_02_itms.08829.08829.2	4.7102	0.2639	100.0%	1479.8722	1477.7007	1	5.727	90.9%	12	R.FLEQQNKVLETK.W	2 2 2
*	PARC_hx_14_03_itms.10708.10708.2	3.5709	0.1659	98.0%	2002.6721	2000.2596	1	3.851	44.1%	1	C.KQLDSLLGERGNLEGELK.S	2
	PARC_hx_14_02_itms.09465.09465.1	2.8646	0.2609	100.0%	1139.66	1140.2965	9	5.558	68.8%	1	R.DYQELMNVK.L	1 1 1
	PARC_hx_14_02_itms.09446.09446.2	3.2471	0.2069	100.0%	1140.3322	1140.2965	1	5.609	81.2%	2	R.DYQELMNVK.L	2 2 2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2

YML075C

9.6%

1054

115625

8.0

HMG1 SGDID:S000004540, Chr XIII from 118898-115734, reverse complement, Verified ORF, "One of two isozymes of HMG-CoA reductase that catalyzes the conversion of HMG-CoA to mevalonate, which is a rate-limiting step in sterol biosynthesis; localizes to the nuclear envelope; overproduction induces the formation of karmellae"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09975.09975.2	2.9384	0.2116	100.0%	1295.3922	1295.4753	7	4.629	75.0%	2	K.YILQEDLSVSK.E	2
*	PARC_hx_14_03_itms.11626.11626.2	4.5636	0.4067	100.0%	1868.6122	1868.9922	1	8.679	59.4%	2	R.ITTDEIVFESVSEEGGR.L	2
*	PARC_hx_14_02_itms.08298.08298.2	2.9742	0.3308	100.0%	1502.5122	1502.6213	8	5.347	57.7%	1	K.QTLEEDGVVPSTAR.I	2
*	PARC_hx_14_05_itms.14424.14424.2	3.0229	0.3842	100.0%	1771.4922	1769.9487	2	6.524	50.0%	1	R.VSLPDFITSNASENFK.E	2
*	PARC_hx_14_04_itms.12242.12242.2	4.6044	0.4067	100.0%	1527.8922	1526.7734	2	7.811	60.7%	5	K.ALSILAEAPVLASDR.L	2
	PARC_hx_14_03_itms.08258.08258.2	4.3557	0.3046	100.0%	1274.5922	1274.46	1	8.393	80.8%	1	K.AINAGGGATTVLTK.D	2
*	PARC_hx_14_02_itms.09578.09578.2	3.6053	0.335	100.0%	1413.6522	1413.6139	1	7.337	65.4%	1	K.SVVAEATIPGDVVR.K	2

YOR310C

9.4%

511

56956

8.9

NOP58 SGDID:S000005837, Chr XV from 898355-896820, reverse complement, Verified ORF, "Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14904.14904.2	2.975	0.2351	99.9%	1880.0122	1879.0337	1	5.77	50.0%	1	K.FNSAANALEEANSIIEGK.V	2
*	PARC_hx_14_03_itms.12484.12484.2	3.0616	0.1363	99.8%	1960.1721	1961.0869	8	4.988	40.6%	1	K.ASETDLSEILPEEIEER.V	2
*	PARC_hx_14_03_itms.09972.09972.2	3.8091	0.2942	100.0%	1315.4922	1315.5095	1	6.762	70.8%	1	K.SPASTIQILGAEK.A	2

YML048W

9.4%

403

45870

7.1

GSF2 SGDID:S000004511, Chr XIII from 178426-179637, Verified ORF, "ER localized integral membrane protein that may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11039.11039.2	4.0424	0.3708	100.0%	2150.7522	2150.2622	1	7.104	56.2%	1	R.ATYDDYQTNYYNYVIDK.M	2
*	PARC_hx_14_05_itms.13898.13898.2	4.9062	0.562	100.0%	2127.9722	2127.3616	1	9.832	57.5%	2	K.AAAPGIQLVAGEGFQSPLEDR.F	2

YGR106C

9.4%

265

29678

4.1

YGR106C SGDID:S000003338, Chr VII from 699790-698993, reverse complement, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10011.10011.2	2.4433	0.1541	99.8%	1147.0922	1147.2267	1	4.943	72.2%	1	K.ESSSFISFDK.E	2
*	PARC_hx_14_05_itms.16191.16191.2	3.7964	0.2781	100.0%	1831.6921	1831.9801	1	5.911	64.3%	1	K.LDEFIDSCLSFLEDK.S	2

YPL019C

9.3%

835

96553

7.4

VTC3 SGDID:S000005940, Chr XVI from 517016-514509, reverse complement, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10300.10300.2	2.6143	0.2523	100.0%	1203.6921	1203.383	1	4.978	72.2%	1	K.LANDVYPPWK.D	2
*	PARC_hx_14_05_itms.14169.14169.2	3.7041	0.4393	100.0%	1972.5922	1972.1614	1	7.367	63.3%	3	K.ELPFNNSEEYSPLLYR.I	2
*	PARC_hx_14_03_itms.12806.12806.2	4.7653	0.3037	100.0%	1613.6721	1611.7484	1	5.844	83.3%	2	R.DFDNIQNFIVEEK.L	2
*	PARC_hx_14_03_itms.09984.09984.2	2.4578	0.0994	99.4%	1333.6322	1333.4868	54	3.957	54.5%	2	R.TAFQIPGDQSIR.V	2
*	PARC_hx_14_03_itms.10932.10932.2	2.893	0.1898	99.8%	1980.4521	1980.2024	1	4.523	60.0%	1	K.VINQDNSQMPNYEWIK.D	2
*	PARC_hx_14_03_itms.09615.09615.2	2.2882	0.036	98.9%	1204.5922	1203.3378	5	3.655	70.0%	3	K.ISVPDGKTTER.Q	2

contaminant_KERATIN20

9.3%

483

53748

5.4

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_04_itms.05432.05432.2	2.8903	0.0171	99.6%	1309.3722	1309.4215	5	3.906	72.2%	7	K.NKYEDEINKR.T	2 2 2 2
*	PARC_hx_14_03_itms.10233.10233.2	4.0899	0.1786	98.8%	1499.4722	1501.6395	1	5.317	76.9%	1	Q.RASLEAAIADAEQR.G	2
	PARC_hx_14_02_itms.08895.08895.2	2.7944	0.1747	99.9%	1154.4321	1154.3234	5	4.449	81.2%	1	R.EYQELMNVK.L	2 2 2

YGL234W

9.2%

802

86068

5.3

ADE5,7 SGDID:S000003203, Chr VII from 56482-58890, Verified ORF, "Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway, contains aminoimidazole ribotide synthetase and glycinamide ribotide synthetase activities"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08367.08367.2	2.7756	0.2688	99.9%	1708.5521	1707.8987	6	5.124	50.0%	1	K.IYVAPGNGGTATMDPSR.V	2
*	PARC_hx_14_05_itms.15128.15128.2	2.8449	0.2556	99.9%	1732.4922	1731.9487	2	5.198	53.6%	1	R.VINWDITPDVANFAR.L	2
*	PARC_hx_14_04_itms.11260.11260.2	3.2797	0.3453	100.0%	1656.6122	1656.917	1	6.436	56.7%	1	K.GVIIPSSIDESVQAIK.D	2
*	PARC_hx_14_03_itms.12148.12148.2	2.7316	0.278	100.0%	1674.3922	1674.8943	1	5.549	53.8%	3	K.TNQLVPEVLEYNVR.F	2
*	PARC_hx_14_02_itms.09021.09021.2	3.4063	0.4884	100.0%	1290.3522	1290.4594	1	8.603	81.8%	1	R.VLSVTSTAQDLR.T	2

YER001W

9.1%

762

88529

7.2

MNN1 SGDID:S000000803, Chr V from 153519-155807, Verified ORF, "Alpha-1,3-mannosyltransferase, integral membrane glycoprotein of the Golgi complex, required for addition of alpha1,3-mannose linkages to N-linked and O-linked oligosaccharides, one of five S. cerevisiae proteins of the MNN1 family"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11792.11792.2	3.8512	0.4017	100.0%	1685.4922	1685.8279	1	8.184	76.9%	2	R.TLYTLDDEWTNSVK.K	2
*	PARC_hx_14_03_itms.12800.12800.2	3.3277	0.2264	100.0%	1207.4521	1207.346	1	6.68	93.8%	1	K.YDMFQAFER.I	2
*	PARC_hx_14_03_itms.09896.09896.2	2.2171	0.1593	99.7%	1029.9922	1031.2401	73	4.452	75.0%	1	K.VLEQGFLPK.F	2
*	PARC_hx_14_04_itms.11195.11195.2	2.9167	0.1448	99.8%	1536.0922	1536.771	1	5.849	66.7%	1	R.FEGNTLPIQVVYR.G	2
*	PARC_hx_14_03_itms.10029.10029.2	2.5218	0.2371	99.9%	1235.0122	1235.4222	3	4.614	72.2%	1	K.YYYITPISSK.Y	2
*	PARC_hx_14_03_itms.09348.09348.2	3.5152	0.3923	100.0%	1642.7322	1642.7631	1	7.546	65.4%	4	R.TTHGELITLDEEQR.L	2

contaminant_KERATIN15

9.1%

629

64511

6.5

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.11067.11067.2	3.0935	0.2953	100.0%	1398.4321	1398.6017	1	6.445	68.2%	1	K.TLNNKFASFIDK.V	2 2 2 2 2 2
	PARC_hx_14_02_itms.08829.08829.2	4.7102	0.2639	100.0%	1479.8722	1477.7007	1	5.727	90.9%	12	R.FLEQQNKVLETK.W	2 2 2
*	PARC_hx_14_05_itms.15932.15932.2	4.9604	0.29	100.0%	1302.9922	1303.4521	1	6.991	79.2%	11	R.SLDLDSIIAEVGA.Q	2
*	PARC_hx_14_04_itms.13596.13596.1	3.221	0.1998	100.0%	1304.44	1303.4521	6	5.235	58.3%	4	R.SLDLDSIIAEVGA.Q	1
	PARC_hx_14_02_itms.09465.09465.1	2.8646	0.2609	100.0%	1139.66	1140.2965	9	5.558	68.8%	1	R.DYQELMNVK.L	1 1 1
	PARC_hx_14_02_itms.09446.09446.2	3.2471	0.2069	100.0%	1140.3322	1140.2965	1	5.609	81.2%	2	R.DYQELMNVK.L	2 2 2
	PARC_hx_14_05_itms.12908.12908.2	3.8559	0.3693	100.0%	1264.2722	1264.4644	1	7.267	90.0%	5	K.LALDVEIATYR.K	2 2 2 2 2 2

YNL217W

8.9%

326

37151

8.3

YNL217W SGDID:S000005161, Chr XIV from 240332-241312, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10917.10917.2	3.4654	0.3702	100.0%	1728.2722	1728.8962	1	7.082	64.3%	1	L.TFSTETNFIPQDISK.I	2
*	PARC_hx_14_04_itms.09836.09836.2	3.0377	0.2099	99.9%	1731.4122	1731.8658	1	4.796	65.4%	1	K.KGQYDYELIQVQCS.-	2

YPR024W

8.8%

747

81772

7.1

YME1 SGDID:S000006228, Chr XVI from 610478-612721, Verified ORF, "Subunit, with Mgr1p, of the mitochondrial inner membrane i-AAA protease complex, which is responsible for degradation of unfolded or misfolded mitochondrial gene products; mutation causes an elevated rate of mitochondrial turnover"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.11960.11960.2	3.6774	0.3838	100.0%	1680.8121	1680.9445	1	7.482	65.4%	1	K.LLLQSNYPQYVVSR.F	2
*	PARC_hx_14_05_itms.17421.17421.2	5.1809	0.3442	100.0%	1644.0122	1643.9207	1	8.671	80.0%	1	R.APAIIFIDELDAIGGK.R	2
*	PARC_hx_14_02_itms.09672.09672.2	3.4247	0.3037	100.0%	1125.6122	1126.2981	1	6.905	94.4%	1	K.VVNVDLPDVR.G	2
*	PARC_hx_14_03_itms.10979.10979.2	3.9317	0.3829	100.0%	1512.5322	1512.7465	1	6.687	73.1%	1	K.ITLADNVDPTIIAR.G	2
*	PARC_hx_14_03_itms.13529.13529.2	3.196	0.0952	99.8%	1375.1322	1372.5585	1	4.249	77.3%	1	R.DIADNEVIELLK.D	2

contaminant_KERATIN16

8.8%

534

57265

6.6

no description

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08454.08454.2	2.0996	0.0175	98.5%	1134.0521	1134.2773	58	3.092	68.8%	1	K.VQFLEQQNK.V	2
	PARC_hx_14_02_itms.08829.08829.2	4.7102	0.2639	100.0%	1479.8722	1477.7007	1	5.727	90.9%	12	Q.FLEQQNKVLETK.W	2 2 2
*	PARC_hx_14_03_itms.12186.12186.2	4.1649	0.3284	100.0%	1407.5521	1407.5634	1	6.422	81.8%	1	K.VDSLNDEINFLK.V	2
*	PARC_hx_14_04_itms.13799.13799.2	3.4928	0.2407	100.0%	1360.4122	1358.5345	2	5.911	77.3%	1	R.NLDLDSIIAEVR.A	2
	PARC_hx_14_02_itms.07160.07160.2	3.1955	0.1889	100.0%	1108.0122	1108.196	1	5.082	87.5%	2	R.AQYEEIAQR.S	2 2 2 2

YPL131W

8.8%

297

33715

6.8

RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11322.11322.2	2.7001	0.0022	99.3%	1061.6122	1061.2694	13	2.706	93.8%	1	K.VFLDIGLQR.T	2
*	PARC_hx_14_05_itms.17036.17036.2	3.6458	0.2926	100.0%	2094.5322	2094.285	1	6.369	59.4%	3	R.FPGWDFETEEIDPELLR.S	2

YJL130C

8.7%

2214

245123

5.9

URA2 SGDID:S000003666, Chr X from 172285-165641, reverse complement, Verified ORF, "Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11320.11320.2	3.3066	0.3723	100.0%	1818.1721	1819.0269	1	7.003	60.0%	1	K.WLQNEGIPAVYGVDTR.S	2
*	PARC_hx_14_05_itms.15626.15626.2	3.0679	0.2609	100.0%	2145.2722	2145.3765	1	5.652	44.4%	1	R.SAFDVPEWVDPNVQNLVSK.V	2
*	PARC_hx_14_04_itms.13228.13228.2	3.0446	0.3551	100.0%	2610.2322	2610.7502	1	5.953	34.8%	1	K.EDYDGLFISNGPGDPSVLDDLSQR.L	2
*	PARC_hx_14_03_itms.12221.12221.2	3.2169	0.4658	100.0%	1644.5922	1644.8627	1	7.749	60.7%	3	K.VLGTPIDTIITTEDR.E	2
	PARC_hx_14_03_itms.08988.08988.2	1.9521	0.0212	97.9%	1227.7122	1227.4026	1	3.975	59.1%	1	K.ATGYPLAYTAAK.L	2
*	PARC_hx_14_04_itms.11055.11055.2	2.521	0.1274	99.7%	1210.5521	1210.4594	44	3.48	60.0%	1	K.LGLNIPLNEVK.N	2
*	PARC_hx_14_03_itms.10940.10940.2	3.3637	0.4427	100.0%	1937.0922	1937.0519	1	7.435	60.0%	1	K.STCACFEPSLDYCVVK.M	2
*	PARC_hx_14_03_itms.10853.10853.2	3.1201	0.1831	99.9%	1501.3121	1501.7406	4	4.701	62.5%	1	R.MLDQIGVDQPAWK.E	2
*	PARC_hx_14_04_itms.12194.12194.2	5.3352	0.4388	100.0%	1737.4521	1737.8638	1	8.183	78.6%	2	K.NDLESYLNQAVEVSR.D	2
*	PARC_hx_14_05_itms.14362.14362.2	1.849	0.0746	98.2%	1529.5521	1529.878	334	4.093	38.5%	1	K.AIMGLPLTPYPVEK.L	2
*	PARC_hx_14_04_itms.11108.11108.2	3.6219	0.3682	100.0%	1518.8121	1518.7936	1	7.154	61.5%	1	R.LAVDYSVPLVTNVK.C	2
*	PARC_hx_14_03_itms.12492.12492.2	2.4743	0.2039	99.8%	1058.2922	1058.2633	34	3.947	75.0%	1	K.LTIDDIVLR.L	2
*	PARC_hx_14_04_itms.12010.12010.2	3.6799	0.3809	100.0%	1436.5322	1436.6482	1	6.951	65.4%	1	K.AGLLGVESIELTPH.I	2

U	YHL033C	2	2	8.6%	256	28125	10.0	RPL8A SGDID:S000001025, Chr VIII from 36023-35253, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits"
U	YLL045C	2	2	8.6%	256	28112	10.0	RPL8B SGDID:S000003968, Chr XII from 48628-47858, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.08643.08643.2	3.7673	0.2874	100.0%	1159.2122	1159.3304	1	6.1	85.0%	1	K.NFGIGQAVQPK.R	2
	PARC_hx_14_02_itms.09429.09429.2	3.6452	0.289	100.0%	1118.7522	1118.2755	1	5.488	90.0%	1	K.TSAVAALTEVR.A	2

YDR483W

8.4%

442

51387

5.4

KRE2 SGDID:S000002891, Chr IV from 1421147-1422475, Verified ORF, "Alpha1,2-mannosyltransferase of the Golgi involved in protein mannosylation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10452.10452.2	3.2076	0.2692	100.0%	1488.7922	1489.6832	2	6.168	58.3%	1	K.TTMDYITPSFANK.A	2
*	PARC_hx_14_03_itms.12881.12881.2	3.3247	0.3008	100.0%	1614.6122	1615.7797	1	5.266	70.8%	1	W.VFLNDEPFTEEFK.E	2
*	PARC_hx_14_03_itms.11706.11706.2	3.7124	0.4269	100.0%	1451.3722	1450.597	1	7.118	85.0%	1	K.LYCDINYDVFK.W	2

YDR345C

8.3%

567

62558

7.1

HXT3 SGDID:S000002753, Chr IV from 1164652-1162949, reverse complement, Verified ORF, "Low affinity glucose transporter of the major facilitator superfamily, expression is induced in low or high glucose conditions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11667.11667.2	5.007	0.4001	100.0%	2247.0923	2248.368	1	7.615	57.5%	2	K.GVQDDFQAEADQVLTNPNTGK.G	2
*	PARC_hx_14_02_itms.08901.08901.2	4.2336	0.3897	100.0%	1365.3121	1364.4979	1	7.357	90.9%	1	R.YLVEAGQIDEAR.A	2
*	PARC_hx_14_04_itms.11592.11592.2	2.5385	0.3139	100.0%	1382.0122	1382.5156	1	5.71	61.5%	1	R.AAGSASWGELFTGK.P	2

YML125C

8.0%

312

35287

5.5

YML125C SGDID:S000004594, Chr XIII from 21700-20762, reverse complement, Uncharacterized ORF, "Essential protein required for maturation of Gas1p and Pho8p; GFP-fusion protein localizes to the endoplasmic reticulum; null mutants have a cell separation defect"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11903.11903.2	2.8239	0.2019	99.9%	1236.2122	1236.4509	1	4.819	75.0%	1	K.LESGYLDLVVK.A	2
*	PARC_hx_14_03_itms.10924.10924.2	3.0968	0.3463	100.0%	1535.2722	1534.6653	1	6.911	65.4%	1	K.YFAGLNSGDTVDFK.G	2

YML115C

7.9%

535

61092

5.4

VAN1 SGDID:S000004583, Chr XIII from 41794-40187, reverse complement, Verified ORF, "Component of the mannan polymerase I; forms a complex with Mnn9p, which is involved in in mannan synthesis; mutants are vanadate-resistant"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12951.12951.2	3.2567	0.2006	99.9%	2269.872	2272.4297	9	5.168	41.7%	3	K.TLDEDDVIVEGYAEYPTWR.V	2
*	PARC_hx_14_03_itms.12124.12124.2	4.2808	0.4079	100.0%	2241.372	2242.4014	1	7.476	47.7%	1	R.DAEGDPNEAVDLDGVGGVSILAK.A	2

YGR295C

7.9%

381

45678

9.0

COS6 SGDID:S000003527, Chr VII from 1082735-1081590, reverse complement, Verified ORF, "Protein of unknown function, member of a family of conserved, often subtelomerically-encoded proteins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.20582.20582.2	4.2749	0.4261	100.0%	2260.392	2261.487	2	8.509	47.2%	3	K.DSVPYIEEALEVYFTEVEK.Q	2
	PARC_hx_14_02_itms.09944.09944.2	1.9728	0.0903	98.9%	1186.8722	1189.3104	2	3.871	70.0%	1	K.SWSPVGLEDAK.L	2

YCR012W

7.7%

416

44738

7.6

PGK1 SGDID:S000000605, Chr III from 137743-138993, Verified ORF, "3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12656.12656.2	2.1163	0.0495	98.3%	1965.1721	1964.1456	3	3.972	38.2%	1	K.DVTFLNDCVGPEVEAAVK.A	2
*	PARC_hx_14_05_itms.13710.13710.2	3.0858	0.4418	100.0%	1440.4122	1440.683	1	6.833	65.4%	1	K.ASAPGSVILLENLR.Y	2

YPL045W

7.5%

798

92741

7.1

VPS16 SGDID:S000005966, Chr XVI from 467257-469653, Verified ORF, "Subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; part of the Class C Vps complex essential for membrane docking and fusion at both the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09249.09249.2	2.5771	0.1171	99.7%	1068.1921	1068.2762	58	3.217	72.2%	1	K.MLLNAASYGK.A	2
*	PARC_hx_14_03_itms.11781.11781.2	3.9916	0.2938	100.0%	1750.0521	1750.9434	1	6.682	78.6%	1	R.IEQLYNLDDDSIALK.E	2
*	PARC_hx_14_05_itms.14598.14598.2	3.6986	0.4199	100.0%	2477.9321	2478.678	1	6.895	47.5%	1	K.DLYSQVQNSEVVNNTIEQLQR.Q	2
*	PARC_hx_14_03_itms.11336.11336.2	3.3837	0.2713	100.0%	1669.4722	1669.9152	1	4.828	65.4%	1	K.EIYNIIPPNEPELK.A	2

YGR191W

7.1%

603

66006

7.4

HIP1 SGDID:S000003423, Chr VII from 880425-882236, Verified ORF, "High-affinity histidine permease, also involved in the transport of manganese ions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10355.10355.2	2.4587	0.2871	99.9%	1343.1522	1343.4735	1	6.429	72.7%	1	K.ESTTFVTELTSK.T	2
*	PARC_hx_14_02_itms.07974.07974.2	3.5647	0.3397	100.0%	1821.5922	1821.8522	1	6.261	56.2%	1	K.DSPGINQTTNDITSSDR.F	2
*	PARC_hx_14_05_itms.14154.14154.2	1.8945	0.0475	97.9%	1533.9521	1534.7496	54	3.535	38.5%	1	R.SLDELPFISQTGVK.G	2

YDL180W

7.1%

547

62288

5.5

YDL180W SGDID:S000002339, Chr IV from 135897-137540, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13143.13143.2	2.7628	0.2849	100.0%	2347.112	2346.6367	2	6.372	40.0%	2	K.LTTLDTGDLSFPIDEEQPILK.K	2
*	PARC_hx_14_04_itms.10476.10476.2	2.4675	0.0815	99.2%	2058.892	2059.1992	1	4.434	41.2%	1	K.SFGYTWAVPNENTQNTTK.S	2

YNR028W

7.1%

308

34946

7.0

CPR8 SGDID:S000005311, Chr XIV from 676179-677105, Verified ORF, "Peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; similarity to Cpr4p suggests a potential role in the secretory pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11411.11411.2	3.2802	0.3444	100.0%	1578.7322	1578.7865	1	6.41	62.5%	1	K.TVMTFCQYVDSVK.D	2
*	PARC_hx_14_03_itms.08115.08115.2	2.6798	0.1701	99.9%	1128.9922	1129.2174	1	4.863	87.5%	1	K.NYLYQGSQR.K	2

YDL201W

7.0%

286

33391

9.1

TRM8 SGDID:S000002360, Chr IV from 99562-100422, Verified ORF, "Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p that catalyzes 7-methylguanosine modification of tRNA"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09051.09051.2	2.6429	0.1483	95.9%	1037.8121	1038.2815	111	4.086	78.6%	1	N.RKELKHVK.I	2
*	PARC_hx_14_03_itms.10806.10806.2	2.7023	0.0622	99.5%	1332.5721	1332.4532	22	3.654	59.1%	1	K.INESSLVQEGQK.I	2

YPR159W

6.9%

720

80123

4.7

KRE6 SGDID:S000006363, Chr XVI from 857579-859741, Verified ORF, "Protein required for beta-1,6 glucan biosynthesis; putative beta-glucan synthase; appears functionally redundant with Skn1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08248.08248.2	2.3492	0.3098	99.9%	1389.5521	1389.5486	1	5.243	65.4%	1	R.AIASSPSLNSNLSK.N	2
*	PARC_hx_14_03_itms.09258.09258.2	2.472	0.0864	99.6%	1051.4321	1051.2053	150	3.37	62.5%	1	R.SGMLQSWNK.V	2
	PARC_hx_14_03_itms.11088.11088.2	4.519	0.4355	100.0%	1835.7722	1834.9365	1	8.141	64.3%	1	K.YAIEYLNDDDNGYIR.W	2
*	PARC_hx_14_04_itms.11140.11140.2	2.693	0.2039	97.5%	1437.4122	1437.5945	1	5.133	68.2%	1	R.WFVGDTPTYTIH.A	2

YBR205W

6.9%

404

47482

8.7

KTR3 SGDID:S000000409, Chr II from 633617-634831, Verified ORF, "Putative alpha-1,2-mannosyltransferase involved in O- and N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10451.10451.2	2.8626	0.2238	99.9%	1367.3322	1367.5443	1	4.365	68.2%	1	K.LDIPYGSSVPYR.H	2
*	PARC_hx_14_05_itms.15741.15741.2	4.3946	0.4785	100.0%	1995.5521	1996.0961	1	8.769	70.0%	1	R.EYFDYLDSSGGFFYER.W	2

YMR231W

6.7%

1029

117477

5.8

PEP5 SGDID:S000004844, Chr XIII from 733544-736633, Verified ORF, "Peripheral vacuolar membrane protein required for protein trafficking and vacuole biogenesis; forms complex with Pep3p that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, also interacts with Pep7p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.24352.24352.3	3.1964	0.1788	100.0%	3751.6443	3748.9797	1	4.203	21.1%	1	K.NGLDLNCGSFNPATNEFICCLSNFIEFFSSSGK.K	3
*	PARC_hx_14_04_itms.12569.12569.2	3.0883	0.2321	100.0%	2441.9521	2442.6453	1	5.226	42.5%	1	K.EATDQYIQCLDVVETSEIISK.F	2
*	PARC_hx_14_03_itms.12722.12722.2	4.9686	0.4139	100.0%	1678.6522	1679.7838	1	8.87	78.6%	3	K.NDLLNFALNSEEGSR.D	2

YCL043C

6.7%

522

58227

4.5

PDI1 SGDID:S000000548, Chr III from 50221-48653, reverse complement, Verified ORF, "Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, essential for the formation of disulfide bonds in secretory and cell-surface proteins, unscrambles non-native disulfide bonds"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13629.13629.2	4.609	0.4776	100.0%	1941.2722	1942.0863	1	7.634	71.9%	5	K.YGLPQLSEEAFDELSDK.I	2
*	PARC_hx_14_04_itms.12164.12164.2	4.4913	0.4527	100.0%	2055.5322	2056.2366	1	8.397	64.7%	3	K.SQEIFENQDSSVFQLVGK.N	2

YOR254C

6.6%

663

75345

5.3

SEC63 SGDID:S000005780, Chr XV from 807022-805031, reverse complement, Verified ORF, "Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14008.14008.2	2.4671	0.0052	98.5%	2363.7122	2364.6575	13	3.935	33.3%	1	K.ADFLVPGENQVTPSSTPYISLK.V	2
*	PARC_hx_14_03_itms.10540.10540.2	2.167	0.1889	99.7%	1167.6522	1168.4624	1	4.064	72.2%	1	K.ILQTPIIIEK.L	2
*	PARC_hx_14_05_itms.14901.14901.2	3.8028	0.2664	100.0%	1451.7322	1451.6189	1	7.351	81.8%	1	K.FDINDWEIGTIK.I	2

YEL013W

6.6%

578

63208

5.1

VAC8 SGDID:S000000739, Chr V from 128825-130561, Verified ORF, "Phosphorylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway; interacts with Nvj1p to form nucleus-vacuole junctions"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11139.11139.2	4.6383	0.3445	100.0%	1253.7922	1251.4221	1	6.928	77.3%	3	R.SAALAFAEITEK.Y	2
*	PARC_hx_14_03_itms.10247.10247.2	2.9592	0.2556	100.0%	1187.8322	1185.4496	1	5.387	72.7%	1	K.IATSGALIPLTK.L	2
*	PARC_hx_14_03_itms.10838.10838.2	4.764	0.4259	100.0%	1610.3322	1609.7765	1	7.92	80.8%	2	R.NLASDTSYQLEIVR.A	2

YOL018C

6.5%

397

45876

5.3

TLG2 SGDID:S000005378, Chr XV from 292074-290881, reverse complement, Verified ORF, "Syntaxin-like t-SNARE that forms a complex with Tlg1p and Vti1p and mediates fusion of endosome-derived vesicles with the late Golgi; binds Vps45p, which prevents Tlg2p degradation and also facilitates t-SNARE complex formation"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12197.12197.2	2.2153	0.0105	98.2%	1552.5721	1553.758	2	3.182	58.3%	1	K.VYRKNSLPGFEDK.S	2
*	PARC_hx_14_03_itms.11795.11795.2	2.8251	0.1804	99.8%	1552.2122	1550.749	1	5.215	62.5%	1	R.IDYNLENTVVELK.S	2

YDR080W

6.4%

992

113412

4.9

VPS41 SGDID:S000002487, Chr IV from 604004-606982, Verified ORF, "Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13382.13382.2	4.0574	0.3157	100.0%	2129.4321	2128.4016	1	6.977	55.9%	2	K.IVDLFNGDEIYNDEVIMK.N	2
*	PARC_hx_14_03_itms.11202.11202.2	3.7391	0.3583	100.0%	1745.7322	1743.9109	1	6.733	57.1%	2	K.TTPEYYLISSNDAIR.V	2
*	PARC_hx_14_04_itms.14378.14378.2	4.6232	0.4042	100.0%	1743.1522	1743.8645	1	8.488	73.1%	4	K.LFSVEDFEEELETR.I	2
*	PARC_hx_14_04_itms.12837.12837.2	4.2716	0.2326	100.0%	1819.6721	1819.0369	1	6.337	60.0%	4	R.GMSDDLQIDNLQDIIK.H	2

YMR246W

6.3%

694

77267

6.6

FAA4 SGDID:S000004860, Chr XIII from 759806-761890, Verified ORF, "Long chain fatty acyl-CoA synthetase, regulates protein modification during growth in the presence of ethanol, functions to incorporate palmitic acid into phospholipids and neutral lipids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12747.12747.2	4.1442	0.372	100.0%	1369.4321	1369.5573	1	7.217	86.4%	1	K.LVDVEDLGYFAK.N	2
*	PARC_hx_14_03_itms.13022.13022.2	5.0497	0.5024	100.0%	1827.4122	1827.9042	1	8.866	70.0%	2	K.NPEETAAAFTDDGWFR.T	2
*	PARC_hx_14_03_itms.10017.10017.2	3.2106	0.2227	100.0%	1914.4722	1915.0326	5	5.184	46.7%	1	R.SNPYVQNICVYADENK.V	2

YER123W

6.3%

524

60261

8.8

YCK3 SGDID:S000000925, Chr V from 404809-406383, Verified ORF, "Palmitoylated, vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of the HOPS complex subunit, Vps41p; shares overlapping essential functions with Hrr25p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.10228.10228.2	4.046	0.2113	100.0%	1488.7922	1488.7394	7	5.412	65.4%	1	R.DSSIIMANEPVAIK.F	2
*	PARC_hx_14_05_itms.20132.20132.2	5.0928	0.4249	100.0%	2306.7122	2307.4902	1	7.353	61.1%	4	K.FDEDPDYDYLISLMDDALR.L	2

YOR320C

6.3%

491

57578

8.4

GNT1 SGDID:S000005847, Chr XV from 915089-913614, reverse complement, Verified ORF, "N-acetylglucosaminyltransferase capable of modification of N-linked glycans in the Golgi apparatus"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.16386.16386.2	3.7226	0.3974	100.0%	2167.0122	2165.405	1	7.426	50.0%	2	K.DLLDPNTSSNVAYISSLLNK.I	2
*	PARC_hx_14_03_itms.11315.11315.2	3.0496	0.157	99.9%	1305.4321	1305.5168	1	5.021	80.0%	1	R.VIYLDNDAILR.S	2

YMR243C

6.3%

442

48345

6.4

ZRC1 SGDID:S000004856, Chr XIII from 756165-754837, reverse complement, Verified ORF, "Vacuolar membrane zinc transporter, transports zinc from the cytosol into the vacuole for storage; also has a role in resistance to zinc shock resulting from a sudden influx of zinc into the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08528.08528.2	3.1212	0.3075	100.0%	1337.2922	1337.5187	2	6.11	70.0%	1	R.LIEPQEIQNPR.L	2
*	PARC_hx_14_05_itms.11231.11231.2	4.5375	0.4417	100.0%	1855.8121	1856.1295	1	8.001	65.6%	5	R.ILLQATPSTISADQIQR.E	2

YBR287W

6.1%

427

47506

4.9

YBR287W SGDID:S000000491, Chr II from 776567-777850, Uncharacterized ORF, "Protein of unknown function; mutation results in a zinc sensitive phenotype"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11694.11694.2	4.1952	0.4033	100.0%	3157.4722	3158.2268	1	8.28	38.0%	1	R.TPNIDNEELVNEEQEEQELLEEENNR.M	2
*	PARC_hx_14_03_itms.11685.11685.3	5.2721	0.3242	100.0%	3158.4243	3158.2268	1	5.439	26.0%	1	R.TPNIDNEELVNEEQEEQELLEEENNR.M	3

U	YDR038C	4	6	6.0%	1091	120296	5.5	ENA5 SGDID:S000002445, Chr IV from 530693-527418, reverse complement, Verified ORF, "Protein with similarity to P-type ATPase sodium pumps"
U	YDR040C	4	6	6.0%	1091	120357	5.6	ENA1 SGDID:S000002447, Chr IV from 538463-535188, reverse complement, Verified ORF, "P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance"
U	YDR039C	4	6	6.0%	1091	120317	5.5	ENA2 SGDID:S000002446, Chr IV from 534578-531303, reverse complement, Verified ORF, "P-type ATPase sodium pump, involved in Na+ efflux to allow salt tolerance; likely not involved in Li+ efflux"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.11768.11768.2	5.4406	0.4862	100.0%	1954.7122	1953.1101	1	8.547	64.7%	2	K.NFDTDESLLTGESLPVSK.D	2
PARC_hx_14_03_itms.13598.13598.2	3.2961	0.0135	99.6%	1578.8922	1579.762	8	4.493	70.8%	1	K.DLPEDIDMDLFQK.W	2
PARC_hx_14_03_itms.09172.09172.2	3.4044	0.314	100.0%	1251.9722	1252.3696	1	7.068	85.0%	1	K.NVYSLSNEGLR.V	2
PARC_hx_14_05_itms.18030.18030.2	4.2954	0.4847	100.0%	2465.912	2465.633	1	8.689	50.0%	2	K.EASDIVLSDDNFASILNAVEEGR.R	2

YHR149C

6.0%

734

81849

5.0

SKG6 SGDID:S000001192, Chr VIII from 396662-394458, reverse complement, Uncharacterized ORF, "Protein of unknown function; found in the bud tip and bud neck, potential Cdc28p substrate; Skg6p interacts with Zds1p and Zds2p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10438.10438.2	2.5909	0.1769	99.7%	1157.4722	1157.3115	1	4.964	87.5%	1	K.SIYQVYLDR.A	2
*	PARC_hx_14_03_itms.10458.10458.2	3.6319	0.1034	99.9%	1440.2722	1437.6793	1	3.993	75.0%	3	R.VDNIVQNPLPSIK.I	2
*	PARC_hx_14_03_itms.11331.11331.2	4.1513	0.5062	100.0%	2419.4922	2419.6685	1	8.208	45.2%	1	K.EALPLNNTNLAEYGPEMAQSQK.Q	2

YKL064W

5.9%

969

109736

7.5

MNR2 SGDID:S000001547, Chr XI from 317408-320317, Verified ORF, "Putative magnesium transporter; has similarity to Alr1p and Alr2p, which mediate influx of Mg2+ and other divalent cations"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08578.08578.2	4.2867	0.5168	100.0%	1813.8922	1814.0637	1	8.728	65.6%	1	R.EGPQSVSSTVQPQPIMK.F	2
*	PARC_hx_14_04_itms.10694.10694.2	3.0927	0.1561	99.8%	1540.1721	1537.7562	2	3.989	69.2%	1	K.PIVTNIDVPELGNR.R	2
*	PARC_hx_14_03_itms.10220.10220.2	4.0198	0.3381	100.0%	1413.1721	1413.617	1	6.7	79.2%	2	R.IQSGLQDNLLVGR.N	2
*	PARC_hx_14_02_itms.08909.08909.2	4.0379	0.4022	100.0%	1347.5521	1346.5236	1	7.481	79.2%	1	K.AETVSQLQGLTAK.N	2

YNL268W

5.9%

611

68090

7.0

LYP1 SGDID:S000005212, Chr XIV from 138551-140386, Verified ORF, "Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08550.08550.2	3.0931	0.1931	100.0%	1023.3722	1024.1619	2	4.099	100.0%	1	R.FSNIITSNK.W	2
	PARC_hx_14_04_itms.09629.09629.2	3.3062	0.339	100.0%	1399.3922	1399.5461	1	6.933	69.2%	1	R.NPGAWGPGIISSDK.S	2
*	PARC_hx_14_03_itms.11705.11705.2	3.9572	0.323	100.0%	1588.3522	1587.7234	1	6.239	87.5%	1	R.EIEAIIWEDDEPK.N	2

YBR127C

5.8%

517

57749

5.1

VMA2 SGDID:S000000331, Chr II from 492816-491263, reverse complement, Verified ORF, "Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; contains nucleotide binding sites; also detected in the cytoplasm"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11404.11404.2	2.8932	0.249	99.9%	1704.0322	1704.9207	1	5.418	60.7%	2	R.YNEIVNLTLPDGTVR.Q	2
*	PARC_hx_14_04_itms.12178.12178.2	2.4322	0.1776	99.7%	1706.8121	1704.9207	3	4.378	50.0%	1	R.TSLFLNLANDPTIER.I	2

contaminant_NRL_1MCOH

5.8%

428

46852

8.9

owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H...

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08234.08234.1	1.8663	0.1213	97.9%	835.53	835.994	29	3.756	66.7%	1	K.DTLMISR.T	1
*	PARC_hx_14_02_itms.08252.08252.2	2.1561	0.0936	99.4%	836.4922	835.994	4	4.431	83.3%	1	K.DTLMISR.T	2
*	PARC_hx_14_03_itms.08126.08126.1	1.7725	0.1612	100.0%	838.56	839.02264	1	4.229	78.6%	3	K.ALPAPIEK.T	1
*	PARC_hx_14_03_itms.10032.10032.2	2.3486	0.1267	99.7%	1162.6522	1162.3379	33	3.578	61.1%	1	K.NQVSLTCLVK.G	2

U	YBR118W	3	4	5.7%	458	50033	9.0	TEF2 SGDID:S000000322, Chr II from 477665-479041, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF1; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes"
U	YPR080W	3	4	5.7%	458	50033	9.0	TEF1 SGDID:S000006284, Chr XVI from 700592-701968, Verified ORF, "Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_03_itms.10408.10408.1	2.0395	0.054	95.3%	894.54	895.04584	29	3.166	75.0%	1	K.YAWVLDK.L	1
PARC_hx_14_03_itms.09416.09416.2	2.7199	0.1734	99.9%	976.3122	976.1607	2	3.931	92.9%	2	R.LPLQDVYK.I	2
PARC_hx_14_04_itms.08534.08534.2	3.3994	0.2746	100.0%	1026.2522	1026.2241	1	6.012	90.0%	1	K.IGGIGTVPVGR.V	2

contaminant_INT-STD1

5.6%

607

69271

6.1

BSA

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.08136.08136.1	2.3577	0.0764	98.0%	922.61	923.05383	4	3.649	71.4%	1	K.AEFVEVTK.L	1
*	PARC_hx_14_05_itms.16436.16436.2	4.0812	0.417	100.0%	1569.5521	1568.7258	1	8.097	79.2%	1	K.DAFLGSFLYEYSR.R	2
*	PARC_hx_14_03_itms.12525.12525.2	2.4172	0.1535	99.7%	1481.4122	1480.7068	1	4.121	75.0%	1	K.LGEYGFQNALIVR.Y	2

YOR204W

5.6%

604

65553

7.8

DED1 SGDID:S000005730, Chr XV from 722911-724725, Verified ORF, "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all yeast mRNAs; mutations in human DEAD-box DBY are a frequent cause of male infertility"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.18530.18530.2	3.9361	0.3796	100.0%	2541.5322	2538.8975	1	7.215	43.2%	2	K.DVPEPITEFTSPPLDGLLLENIK.L	2
	PARC_hx_14_03_itms.11822.11822.2	3.6479	0.2901	100.0%	1337.4521	1337.5946	1	6.932	80.0%	1	R.MLDMGFEPQIR.H	2 2

Similarities: YNL112W(1:1)

YLL043W

5.5%

669

73877

6.9

FPS1 SGDID:S000003966, Chr XII from 49937-51946, Verified ORF, "Plasma membrane glycerol channel, member of the major intrinsic protein (MIP) family of channel proteins; involved in efflux of glycerol and in uptake of the trivalent metalloids arsenite and antimonite"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.14403.14403.2	4.5143	0.4481	100.0%	1899.7322	1900.0953	1	8.595	62.5%	1	R.GQTTVSANVLNIEDFYK.N	2
*	PARC_hx_14_03_itms.10251.10251.2	4.6926	0.4132	100.0%	2355.4521	2356.2878	1	8.299	60.5%	1	R.TSDLSDFSYNNDDDEEFGER.M	2

YFL037W

5.5%

457

50923

4.7

TUB2 SGDID:S000001857, Chr VI from 56335-57708, Verified ORF, "Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10827.10827.2	3.4484	0.3689	100.0%	1599.6721	1599.7814	2	6.754	60.7%	1	R.SINVDLEPGTIDAVR.N	2
*	PARC_hx_14_03_itms.11128.11128.2	3.457	0.342	100.0%	1130.2122	1130.3038	1	6.37	83.3%	1	R.VGDQFSAMFK.R	2

YLR259C

5.1%

572

60752

5.3

HSP60 SGDID:S000004249, Chr XII from 665004-663286, reverse complement, Verified ORF, "Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; similarity to groEL"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.10367.10367.2	3.6088	0.2643	100.0%	1339.6522	1339.5773	1	6.054	86.4%	1	R.NVLIEQPFGPPK.I	2
*	PARC_hx_14_03_itms.10617.10617.2	2.3066	0.0259	98.5%	1582.6122	1582.8375	166	3.249	37.5%	1	R.AAVEEGILPGGGTALVK.A	2

Reverse_YDR515W

5.1%

447

50943

9.3

SLF1 SGDID:S000002923, Chr IV from 1473419-1474762, Verified ORF, "RNA binding protein that associates with polysomes; proposed to be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.11118.11118.2	1.9617	0.0119	98.0%	1221.3121	1222.3463	39	3.092	61.1%	1	K.KNIDNNYKGR.K	2
*	PARC_hx_14_03_itms.09982.09982.2	2.8055	0.1253	99.6%	1306.2122	1307.4465	17	4.092	58.3%	1	K.TNSTLKISGSGNK.S	2

YLL015W

4.9%

1559

176873

7.7

BPT1 SGDID:S000003938, Chr XII from 116431-121110, Verified ORF, "ABC type transmembrane transporter of MRP/CFTR family, found in vacuolar membrane, involved in the transport of unconjugated bilirubin and in heavy metal detoxification via glutathione conjugates, along with Ycf1p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13568.13568.2	4.5705	0.4389	100.0%	1786.4722	1786.933	1	8.662	75.0%	1	K.SFLLSDEIDDSFIER.I	2
*	PARC_hx_14_05_itms.13409.13409.2	4.247	0.2813	100.0%	1470.7122	1470.6831	1	7.42	75.0%	1	R.SPMTFFETTPVGR.I	2
*	PARC_hx_14_03_itms.10385.10385.2	3.2023	0.3023	100.0%	2116.5723	2117.3264	1	5.637	50.0%	1	R.IVEYCELPPEAQSINPEK.R	2
*	PARC_hx_14_03_itms.10560.10560.2	3.0477	0.2642	100.0%	1482.8722	1482.6769	1	5.865	75.0%	1	R.ENLDPVLNNINVK.I	2
*	PARC_hx_14_03_itms.12180.12180.2	2.452	0.2051	99.8%	1852.5122	1851.076	1	5.062	46.9%	1	K.ILVLDEATASVDMETDK.I	2

YER165W

4.9%

577

64344

6.0

PAB1 SGDID:S000000967, Chr V from 510368-512101, Verified ORF, "Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12392.12392.2	4.5217	0.4862	100.0%	2015.1122	2015.1406	1	8.361	68.8%	1	K.NINSETTDEQFQELFAK.F	2
*	PARC_hx_14_03_itms.10149.10149.2	2.2611	0.1138	99.4%	1148.6322	1148.3446	5	3.861	70.0%	1	K.FGPIVSASLEK.D	2

YDR329C

4.8%

441

50676

6.4

PEX3 SGDID:S000002737, Chr IV from 1127588-1126263, reverse complement, Verified ORF, "Peroxisomal membrane protein (PMP) required to recruit Pex19p chaperone to peroxisomes; plays selective, essential, direct role in PMP import as a docking factor for Pex19p"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12586.12586.2	2.8691	0.0864	99.8%	1245.4722	1245.4178	1	4.217	77.8%	1	K.AELWNELELK.S	2
*	PARC_hx_14_02_itms.10518.10518.2	3.2616	0.285	100.0%	1299.6721	1298.3922	3	5.758	70.0%	1	R.DTLTLEEFSSR.L	2

YER138C

4.7%

1755

198561

8.1

YER138C SGDID:S000000940, Chr V from 449020-447719,447717-443752, reverse complement, transposable_element_gene, "TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition"

Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
PARC_hx_14_02_itms.08159.08159.2	2.5013	0.112	99.4%	1640.0521	1640.7472	19	4.028	50.0%	1	K.EVHTNQDPLDVSASK.T	2
PARC_hx_14_03_itms.12963.12963.2	3.8111	0.2757	100.0%	1416.4722	1413.6257	1	5.425	86.4%	5	K.DILSVDYTDIMK.I	2
PARC_hx_14_03_itms.08818.08818.2	2.9291	0.2844	100.0%	991.39215	991.203	1	5.823	92.9%	1	K.VACQLIMR.G	2
PARC_hx_14_03_itms.12189.12189.2	2.4376	0.0659	99.0%	1695.2722	1694.8352	11	4.683	39.3%	1	K.SAPSYFISFTDETTK.F	2
PARC_hx_14_03_itms.13191.13191.2	4.1209	0.3553	100.0%	2090.672	2090.2102	1	8.127	59.4%	1	R.LDQFNYDALTFDEDLNR.L	2
PARC_hx_14_03_itms.09724.09724.2	2.4113	0.2837	99.9%	1791.1322	1789.9824	3	5.623	46.7%	1	K.LVAISDASYGNQPYYK.S	2

YBR038W

4.7%

963

109882

8.6

CHS2 SGDID:S000000242, Chr II from 311897-314788, Verified ORF, "Chitin synthase II, requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for the synthesis of chitin in the primary septum during cytokinesis"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10187.10187.2	2.9986	0.2732	100.0%	1059.4722	1059.2511	1	5.088	83.3%	1	K.VSVILISDGR.A	2
*	PARC_hx_14_03_itms.10200.10200.2	3.6336	0.3642	100.0%	1624.4122	1623.8212	1	6.314	53.3%	1	K.VFDMDSNVAGAAGQIK.T	2
*	PARC_hx_14_03_itms.12740.12740.2	3.8654	0.3808	100.0%	2110.5122	2110.1956	1	6.904	47.2%	1	K.EATGETDVPEDVSEFISQR.R	2

YOL060C

4.7%

706

77712

6.7

MAM3 SGDID:S000005421, Chr XV from 216136-214016, reverse complement, Verified ORF, "Protein required for normal mitochondrial morphology, has similarity to hemolysins"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.18230.18230.2	4.7443	0.3678	100.0%	1416.3121	1416.6549	1	6.945	87.5%	1	K.DEVTIISAVLDLK.A	2
*	PARC_hx_14_03_itms.10502.10502.2	3.0989	0.2841	100.0%	1159.5922	1159.3684	1	5.221	70.0%	1	K.NGIVESVITVK.G	2
*	PARC_hx_14_02_itms.08453.08453.2	2.9093	0.1975	100.0%	1026.7522	1027.0789	1	4.855	87.5%	1	R.SNFTDSLSR.T	2

YGL228W

4.5%

577

66862

5.9

SHE10 SGDID:S000003197, Chr VII from 67598-69331, Verified ORF, "Putative glycosylphosphatidylinositol (GPI)-anchored protein of unknown function; overexpression causes growth arrest"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12035.12035.2	2.3068	0.2626	99.9%	1221.3121	1221.3959	2	5.114	77.8%	1	K.TQDVIQLFEK.D	2
*	PARC_hx_14_03_itms.13276.13276.2	2.0035	0.1201	98.9%	1916.5322	1917.212	69	3.105	36.7%	1	K.ILSFTQESGEFLYILR.S	2

YKL103C

4.5%

514

57093

5.8

LAP4 SGDID:S000001586, Chr XI from 247326-245782, reverse complement, Verified ORF, "Vacuolar aminopeptidase, often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09790.09790.2	2.3205	0.1951	99.7%	1415.3121	1415.5957	2	4.363	54.2%	1	K.SALVDSTPLPVCR.I	2
*	PARC_hx_14_03_itms.10846.10846.2	2.7399	0.1996	99.9%	1059.4521	1059.2076	1	5.387	77.8%	2	K.GGLLESVVER.S	2

YDR119W

4.3%

768

85683

8.3

YDR119W SGDID:S000002526, Chr IV from 688222-690528, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.09730.09730.2	2.7036	0.2375	99.9%	1741.3522	1741.9359	1	5.337	53.3%	1	K.IEEINENSPLLSAPSK.Q	2
*	PARC_hx_14_05_itms.10569.10569.2	4.1866	0.4426	100.0%	1819.4722	1820.0093	1	8.347	59.4%	1	K.AVDIDTIDAQPLHEGPK.I	2

YHR030C

4.3%

484

55636

5.3

SLT2 SGDID:S000001072, Chr VIII from 170337-168883, reverse complement, Verified ORF, "Serine/threonine MAP kinase involved in regulating the maintenance of cell wall integrity and progression through the cell cycle; regulated by the PKC1-mediated signaling pathway"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.10700.10700.2	2.8975	0.1003	99.8%	1201.6921	1199.3055	14	3.129	66.7%	1	K.VFNQDFSVDK.R	2
*	PARC_hx_14_05_itms.25300.25300.2	1.5561	0.0807	97.6%	1415.1122	1417.6042	35	3.397	45.0%	1	K.ELEFGLDRKYF.-	2

U	YFR031C-A	2	2	4.3%	254	27408	11.1	RPL2A SGDID:S000002104, Chr VI from 221406-221403,221255-220495, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E. coli L2 and rat L8 ribosomal proteins"
U	YIL018W	2	2	4.3%	254	27408	11.1	RPL2B SGDID:S000001280, Chr IX from 316766-316769,317170-317930, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl2Ap and has similarity to E. coli L2 and rat L8 ribosomal proteins; expression is upregulated at low temperatures"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
	PARC_hx_14_04_itms.09063.09063.1	3.0898	0.2666	100.0%	955.65	956.1331	1	6.098	65.0%	1	R.GVIGVIAGGGR.V	1
	PARC_hx_14_04_itms.09052.09052.2	4.1225	0.3627	100.0%	955.6922	956.1331	1	5.806	90.0%	1	R.GVIGVIAGGGR.V	2

YLR148W

4.2%

918

107398

7.0

PEP3 SGDID:S000004138, Chr XII from 434642-437398, Verified ORF, "Vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis, forms complex with Pep5p that mediates protein transport to the vacuole"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12848.12848.2	3.4037	0.0593	99.6%	1707.4521	1706.8926	1	4.435	69.2%	3	K.FPLVLPDESEQFER.L	2
*	PARC_hx_14_03_itms.10826.10826.2	3.7561	0.4046	100.0%	1441.5322	1441.6392	1	7.187	72.7%	1	K.LDNETVYQIMSK.Q	2
*	PARC_hx_14_03_itms.11716.11716.2	3.9646	0.2355	100.0%	1563.3722	1563.7881	1	5.492	75.0%	1	K.VIVNDEILIEDYK.L	2

YDR508C

4.2%

663

73598

7.7

GNP1 SGDID:S000002916, Chr IV from 1468434-1466443, reverse complement, Verified ORF, "High-affinity glutamine permease, also transports Leu, Ser, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09094.09094.2	3.2287	0.1851	100.0%	1466.4521	1466.5623	1	4.598	68.2%	1	R.NDLDDVSHYEMK.E	2
*	PARC_hx_14_03_itms.11297.11297.2	3.1406	0.2107	99.9%	1911.3121	1912.06	1	4.726	56.7%	3	K.QIGSIEPENEVEYFEK.T	2

YNR013C

4.1%

894

99490

8.0

PHO91 SGDID:S000005296, Chr XIV from 651714-649030, reverse complement, Verified ORF, "Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.08849.08849.2	2.1257	0.0762	99.2%	986.2922	986.1558	68	3.565	78.6%	1	K.YLAYSQLK.K	2
*	PARC_hx_14_03_itms.09645.09645.2	2.9583	0.1444	99.9%	1133.0322	1133.3329	1	4.258	88.9%	1	K.FVAALNQELK.K	2
*	PARC_hx_14_03_itms.11142.11142.2	4.2748	0.2458	100.0%	1401.1522	1399.5431	1	5.727	81.8%	1	K.DFIELNQTGFSK.I	2
*	PARC_hx_14_03_itms.08228.08228.2	1.4874	0.0052	96.9%	942.39215	941.0342	5	3.049	83.3%	1	R.DHVVWER.N	2

YFL041W

4.0%

622

70880

5.2

FET5 SGDID:S000001853, Chr VI from 49139-51007, Verified ORF, "Multicopper oxidase, integral membrane protein with similarity to Fet3p; may have a role in iron transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12996.12996.2	4.0013	0.3202	100.0%	1583.8322	1581.7655	1	5.714	70.8%	3	R.ATNDFYLEPLIER.D	2
*	PARC_hx_14_03_itms.10212.10212.2	3.4773	0.2393	100.0%	1362.9722	1362.5687	1	5.361	72.7%	1	R.IYGDNINAQLLK.H	2

YFL004W

3.9%

828

95441

6.8

VTC2 SGDID:S000001890, Chr VI from 131805-134291, Verified ORF, "Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in protein localization and non-autophagic vacuolar fusion"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10344.10344.2	2.2553	0.1306	99.6%	1217.0122	1217.4099	1	3.742	77.8%	1	K.LANEVYPPWK.G	2
*	PARC_hx_14_04_itms.13672.13672.2	4.4924	0.1749	100.0%	1728.0322	1725.936	1	4.808	76.9%	4	R.LEEDFSEIQNFIIK.N	2
*	PARC_hx_14_03_itms.09153.09153.2	2.2692	0.1988	99.8%	1003.7322	1003.146	6	3.943	85.7%	1	K.NELQPVFR.T	2

YOR087W

3.7%

675

77953

5.4

YVC1 SGDID:S000005613, Chr XV from 487708-489735, Verified ORF, "Vacuolar cation channel, mediates release of Ca(2+) from the vacuole in response to hyperosmotic shock"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.07798.07798.2	2.4415	0.1976	99.8%	1062.2722	1062.1772	1	4.568	81.2%	1	R.NLASQQLCK.L	2
*	PARC_hx_14_03_itms.11352.11352.2	5.1758	0.4409	100.0%	1844.6522	1844.0614	1	8.662	70.0%	1	K.VIDNADDEYMALMSQK.T	2

YNL054W

3.6%

1165

128140

6.0

VAC7 SGDID:S000004999, Chr XIV from 526087-529584, Verified ORF, "Integral vacuolar membrane protein involved in vacuole inheritance and morphology; may function to regulate Fab1p kinase activity"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12737.12737.2	3.3624	0.2045	100.0%	1474.2522	1473.6635	1	4.971	70.8%	1	R.EILLGENLLDDTK.A	2
*	PARC_hx_14_03_itms.08843.08843.2	2.9646	0.2345	100.0%	1302.1122	1301.4447	1	6.039	68.2%	1	K.IFDSNPNGAPLR.R	2
*	PARC_hx_14_04_itms.12046.12046.2	4.2782	0.4449	100.0%	1702.2122	1702.9023	1	8.113	65.6%	2	N.NDISGGNIETVLLGTAK.K	2
*	PARC_hx_14_04_itms.12395.12395.2	3.4382	0.1832	98.0%	1588.7522	1588.7985	3	5.577	60.0%	1	N.DISGGNIETVLLGTAK.K	2

YGL167C

3.6%

950

104571

5.7

PMR1 SGDID:S000003135, Chr VII from 190474-187622, reverse complement, Verified ORF, "High affinity Ca2+/Mn2+ P-type ATPase required for Ca2+ and Mn2+ transport into Golgi; involved in Ca2+ dependent protein sorting and processing; mutations in human homolog ATP2C1 cause acantholytic skin condition Hailey-Hailey disease"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12587.12587.2	1.725	0.034	97.2%	2057.2722	2057.2183	1	3.332	38.2%	1	R.SLYGPNEITVEDDESLFK.K	2
*	PARC_hx_14_03_itms.12322.12322.2	2.5622	0.2616	99.9%	1734.6322	1733.9537	1	4.78	53.3%	1	K.LTLSDSSTPLTEDLIK.D	2

YLR396C

3.6%

691

79271

5.3

VPS33 SGDID:S000004388, Chr XII from 912310-910235, reverse complement, Verified ORF, "ATP-binding protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at both the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.09671.09671.2	2.9515	0.3536	100.0%	1602.7722	1602.7411	1	5.986	58.3%	1	R.IDEHQTENDLFIK.G	2
*	PARC_hx_14_03_itms.10352.10352.2	3.4816	0.3347	100.0%	1379.5122	1379.5126	2	5.821	72.7%	1	K.EFVDSLGSLQQR.Q	2

YBR023C

3.4%

1165

131601

6.7

CHS3 SGDID:S000000227, Chr II from 287925-284428, reverse complement, Verified ORF, "Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12612.12612.2	3.3085	0.4312	100.0%	2340.0522	2340.462	1	7.642	38.1%	1	R.SGIQDVEVDSDTLYGPWSDAGK.D	2
*	PARC_hx_14_04_itms.13052.13052.2	2.0461	0.0678	98.4%	1988.6721	1988.2072	2	3.945	41.2%	1	K.GSDGYWVPVLANPDIVER.Y	2

YBL017C

3.2%

1579

177777

4.9

PEP1 SGDID:S000000113, Chr II from 191586-186847, reverse complement, Verified ORF, "Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_05_itms.16042.16042.2	2.3633	0.2047	99.7%	2255.0322	2253.463	1	5.012	36.1%	1	R.YNDMSSMDVWVSNDLSNFK.M	2
	PARC_hx_14_03_itms.10254.10254.2	2.9243	0.2813	100.0%	1515.2722	1515.6599	1	6.78	61.5%	1	R.AYVTIDGTEFAEAK.F	2
*	PARC_hx_14_05_itms.14748.14748.2	2.2866	0.1208	99.2%	1999.8522	2000.1383	1	4.541	43.8%	1	K.TDENCFIGNIPLSEFSR.N	2

YNL192W

3.1%

1131

129919

6.2

CHS1 SGDID:S000005136, Chr XIV from 276503-279898, Verified ORF, "Chitin synthase I, requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for repairing the chitin septum during cytokinesis; transcription activated by mating factor"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.11565.11565.2	2.5771	0.1935	99.8%	2385.672	2385.5896	5	4.067	35.0%	1	K.TLLDQYATTTENANTLPNEFK.F	2
*	PARC_hx_14_02_itms.08117.08117.2	3.6671	0.3113	100.0%	1653.0122	1651.7797	1	7.644	73.1%	1	R.YQAVTCEPNQLAEK.N	2

YDR270W

3.1%

1004

109829

5.2

CCC2 SGDID:S000002678, Chr IV from 1005669-1008683, Verified ORF, "Cu(+2)-transporting P-type ATPase, required for export of copper from the cytosol into an extracytosolic compartment; has similarity to human proteins involved in Menkes and Wilsons diseases"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.12075.12075.2	3.4059	0.3875	100.0%	1779.8722	1779.9414	1	6.661	56.7%	1	K.AFEDESPLILSSVSER.F	2
*	PARC_hx_14_05_itms.14928.14928.2	2.84	0.3166	100.0%	1606.9922	1605.8718	1	6.423	53.6%	1	K.ALNAVVLESEYVLGK.G	2

YGR125W

3.0%

1036

116971

7.4

YGR125W SGDID:S000003357, Chr VII from 742330-745440, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.12124.12124.2	2.0117	0.021	97.9%	1533.6522	1534.7117	134	3.429	38.5%	1	R.QAGWIFPIANSDSK.W	2
*	PARC_hx_14_03_itms.09843.09843.2	4.5767	0.494	100.0%	1884.5122	1884.9567	1	8.687	59.4%	1	K.NINADNIDYSAAEGFNR.I	2

YLR241W

2.9%

782

89344

8.1

YLR241W SGDID:S000004231, Chr XII from 620475-622823, Uncharacterized ORF, "Hypothetical protein"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_04_itms.13928.13928.2	4.1269	0.3708	100.0%	1578.3722	1578.7594	1	6.656	79.2%	3	K.EVDAIEYLEQQLK.F	2
*	PARC_hx_14_03_itms.10764.10764.2	2.7063	0.1099	99.8%	1179.6721	1177.3428	1	4.191	88.9%	1	K.FIDAEIIEAR.K	2

YGL006W

2.0%

1173

130861

7.4

PMC1 SGDID:S000002974, Chr VII from 485925-489446, Verified ORF, "Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions; prevents growth inhibition by activation of calcineurin in the presence of elevated concentrations of calcium"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_03_itms.10800.10800.2	2.9393	0.2397	100.0%	1421.1322	1421.652	1	5.098	70.8%	1	K.TGTLTENVMTVVR.G	2
*	PARC_hx_14_03_itms.09370.09370.2	2.2498	0.0169	98.6%	1263.0122	1263.4362	9	3.393	65.0%	1	K.VVQTIPFESSR.K	2

Reverse_YPL084W

1.3%

844

97276

5.4

BRO1 SGDID:S000006005, Chr XVI from 394035-396569, Verified ORF, "Cytoplasmic class E vacuolar protein sorting (VPS) factor that coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes"

	Filename	XCorr	DeltCN	Conf%	ObsM+H+	CalcM+H+	SpR	ZScore	Ion%	#	Sequence
*	PARC_hx_14_02_itms.11471.11471.2	2.83	0.0865	99.7%	1203.8522	1205.2236	1	3.957	83.3%	1	K.TIDDNNIEDR.L	2
*	PARC_hx_14_05_itms.15814.15814.2	3.5916	0.1562	97.8%	1320.4321	1318.383	2	4.436	75.0%	2	K.TIDDNNIEDRL.E	2

	Proteins	Peptide IDs	Spectra
Unfiltered	7337	18241	20149
Filtered	184	939	2038
Forward matches	182	935	2033
Decoy matches	2	4	5
Forward FP rate	1.1%	0.43%	0.25%

/data/6/jamest/xu/nov07/hx14/parc