DTASelect v1.9 /data/2/shabadu/february2005/sandall/bir1 /scratch/yates/yrcdb/cerv4932.FASTAC SEQUEST 2.7 in SQT format. true Use criteria 1.8 Minimum +1 XCorr 2.5 Minimum +2 XCorr 3.5 Minimum +3 XCorr 0.08 Minimum DeltCN 1 Minimum charge state 3 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement true Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide false Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 10 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN M+H+ CalcM+H+ TotalIntensity SpRank SpScore IonProportion Redundancy Sequence BIR1_YEAST 21 56 22.7% 954 108667 6.5 U (P47134) BIR1 protein * bir1-04.17740.17740.2 3.6693 0.3165 1412.09 1411.64 6074.5 3 851.5 68.2 3 K.LGFYFDPVIDPK.T * bir1-01.18368.18368.1 2.2316 0.0965 1290.67 1291.505 3866.7 1 311.6 65.0 1 K.DVLETLSNIMR.Q * bir1-01.18363.18363.2 4.0661 0.2842 1292.95 1291.505 8543.9 1 1931.6 90.0 1 K.DVLETLSNIMR.Q * bir1-06.33129.33129.3 4.0275 0.3444 2698.64 2697.926 10983.3 1 1285.5 33.0 1 R.KFTFQDNWPHSGSQNEHPLGIEK.M * bir1-02.07915.07915.2 3.0606 0.4972 1740.21 1742.88 6950.5 1 579.2 62.5 1 K.TLMNDTCYCIYCK.Q * bir1-02.06757.06757.2 3.9074 0.3974 2150.25 2150.282 9693.6 1 1461.4 58.3 1 K.EQINMENGSTTLEEGNINR.D * bir1-06.24881.24881.2 3.0541 0.2296 1401.75 1401.646 6873.2 1 1131.0 77.3 2 K.DLVIDFTSHIIK.N * bir1-06.27107.27107.3 5.001 0.3374 3662.78 3662.948 7389.9 1 1053.1 28.1 4 K.NAILDDSTDEFSFSNQGHNTFDIPIPTSSHLLK.G * bir1-06.27107.27107.2 3.0518 0.3619 2442.19 2441.706 7389.9 1 294.5 31.0 3 F.SFSNQGHNTFDIPIPTSSHLLK.G * bir1-01.19470.19470.2 4.6758 0.3889 1743.89 1744.852 10019.1 1 2236.4 78.6 3 K.FSVNSEEDLNFSEVK.L * bir1-06.02629.02629.2 2.7453 0.4062 1420.27 1419.624 5023.4 1 382.4 54.2 1 K.TSSIPADIHPKPR.K * bir1-02.11880.11880.2 4.0287 0.4167 2578.33 2578.81 9522.7 1 765.5 40.9 1 K.NETPNNEMLLFETGTPIASQENK.S * bir1-01.19511.19511.2 5.7381 0.506 2179.75 2181.486 8327.6 1 2151.5 76.5 5 K.QMPAEELDMTFNNWVNLK.V * bir1-01.19435.19435.3 4.6436 0.2735 2182.82 2181.486 5141.0 1 866.1 44.1 1 K.QMPAEELDMTFNNWVNLK.V * bir1-06.32527.32527.3 5.8567 0.3643 2863.94 2863.107 6862.8 1 1397.1 40.2 2 R.RDYYTATNFIETLEDDNQLIDIAK.K * bir1-06.30300.30300.3 5.056 0.2166 2992.31 2991.281 4216.6 1 386.0 27.1 2 R.RDYYTATNFIETLEDDNQLIDIAKK.M * bir1-04.25517.25517.2 5.5542 0.4874 2706.45 2706.92 8997.3 1 1780.5 56.8 15 R.DYYTATNFIETLEDDNQLIDIAK.K * bir1-01.17859.17859.3 6.5505 0.4831 2706.71 2706.92 8401.0 1 1879.2 40.9 6 R.DYYTATNFIETLEDDNQLIDIAK.K * bir1-06.33045.33045.3 4.1031 0.4379 2832.92 2835.094 6742.7 1 625.3 28.3 1 R.DYYTATNFIETLEDDNQLIDIAKK.M * bir1-01.19432.19432.2 2.9179 0.2723 2265.19 2265.479 7417.6 1 327.3 39.5 1 Y.TATNFIETLEDDNQLIDIAK.K * bir1-01.17880.17880.1 2.2619 0.1963 1029.81 1030.166 6234.6 56 253.5 56.2 1 D.DNQLIDIAK.K HS75_YEAST 11 20 18.3% 612 66470 5.4 U (P11484) Heat shock protein SSB1 (Cold-inducible protein YG101) bir1-02.11374.11374.2 4.9816 0.4744 1731.65 1731.002 7179.4 1 1804.1 70.6 2 R.IINEPTAAAIAYGLGAGK.S * bir1-03.09414.09414.2 4.5841 0.4697 2463.87 2464.617 7531.4 1 861.1 50.0 3 R.TFTTCADNQTTVQFPVYQGER.V bir1-06.34964.34964.3 5.117 0.4581 2670.23 2670.154 7357.1 1 1504.6 36.5 2 K.NIPMMPAGEPVLEAIFEVDANGILK.V bir1-06.26316.26316.2 4.3648 0.2993 2451.11 2451.736 4558.2 1 471.4 50.0 1 R.QRLESYVASIEQTVTDPVLSSK.L bir1-06.26307.26307.3 4.9098 0.3838 2452.28 2451.736 7129.6 1 828.1 32.1 2 R.QRLESYVASIEQTVTDPVLSSK.L bir1-06.32868.32868.2 5.5472 0.3957 2627.79 2627.908 7258.8 1 1400.6 52.1 1 K.SKIEAALSDALAALQIEDPSADELR.K bir1-06.33015.33015.3 6.5473 0.4065 2628.26 2627.908 8605.6 1 2217.5 41.7 2 K.SKIEAALSDALAALQIEDPSADELR.K bir1-06.31044.31044.3 4.6095 0.3972 2757.05 2756.083 5631.2 1 753.4 32.0 4 K.SKIEAALSDALAALQIEDPSADELRK.A bir1-01.18764.18764.2 5.1799 0.4147 2411.71 2412.656 7987.1 1 1621.3 54.5 1 K.IEAALSDALAALQIEDPSADELR.K bir1-06.27869.27869.2 4.2878 0.3082 2540.13 2540.83 4773.9 1 520.5 43.5 1 K.IEAALSDALAALQIEDPSADELRK.A bir1-06.27822.27822.3 5.1362 0.4377 2541.5 2540.83 4937.7 1 1003.5 38.0 1 K.IEAALSDALAALQIEDPSADELRK.A HS76_YEAST 11 18 18.3% 612 66463 5.5 U (P40150) Heat shock protein SSB2 bir1-02.11374.11374.2 4.9816 0.4744 1731.65 1731.002 7179.4 1 1804.1 70.6 2 R.IINEPTAAAIAYGLGAGK.S * bir1-02.09303.09303.2 4.8188 0.4517 2418.81 2419.61 7792.9 1 865.3 47.5 1 R.TFTTVSDNQTTVQFPVYQGER.V bir1-06.34964.34964.3 5.117 0.4581 2670.23 2670.154 7357.1 1 1504.6 36.5 2 K.NIPMMPAGEPVLEAIFEVDANGILK.V bir1-06.26316.26316.2 4.3648 0.2993 2451.11 2451.736 4558.2 1 471.4 50.0 1 R.QRLESYVASIEQTVTDPVLSSK.L bir1-06.26307.26307.3 4.9098 0.3838 2452.28 2451.736 7129.6 1 828.1 32.1 2 R.QRLESYVASIEQTVTDPVLSSK.L bir1-06.32868.32868.2 5.5472 0.3957 2627.79 2627.908 7258.8 1 1400.6 52.1 1 K.SKIEAALSDALAALQIEDPSADELR.K bir1-06.33015.33015.3 6.5473 0.4065 2628.26 2627.908 8605.6 1 2217.5 41.7 2 K.SKIEAALSDALAALQIEDPSADELR.K bir1-06.31044.31044.3 4.6095 0.3972 2757.05 2756.083 5631.2 1 753.4 32.0 4 K.SKIEAALSDALAALQIEDPSADELRK.A bir1-01.18764.18764.2 5.1799 0.4147 2411.71 2412.656 7987.1 1 1621.3 54.5 1 K.IEAALSDALAALQIEDPSADELR.K bir1-06.27869.27869.2 4.2878 0.3082 2540.13 2540.83 4773.9 1 520.5 43.5 1 K.IEAALSDALAALQIEDPSADELRK.A bir1-06.27822.27822.3 5.1362 0.4377 2541.5 2540.83 4937.7 1 1003.5 38.0 1 K.IEAALSDALAALQIEDPSADELRK.A HS72_YEAST 3 3 11.8% 638 69339 5.1 U (P10592) Heat shock protein SSA2 bir1-01.19490.19490.2 6.3591 0.6479 2577.59 2578.792 9617.7 1 2117.1 54.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T bir1-06.34032.34032.2 5.257 0.4286 2556.51 2557.018 5081.1 1 924.3 52.1 1 K.TQDLLLLDVAPLSLGIETAGGVMTK.L bir1-06.26619.26619.2 4.1896 0.3537 2715.53 2714.992 8320.0 1 754.7 41.3 1 K.KSEVFSTYADNQPGVLIQVFEGER.A HS71_YEAST 3 4 11.7% 641 69526 5.1 U (P10591) Heat shock protein SSA1 (Heat shock protein YG100) bir1-01.19490.19490.2 6.3591 0.6479 2577.59 2578.792 9617.7 1 2117.1 54.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T bir1-06.34032.34032.2 5.257 0.4286 2556.51 2557.018 5081.1 1 924.3 52.1 1 K.TQDLLLLDVAPLSLGIETAGGVMTK.L * bir1-06.27606.27606.3 5.1192 0.3442 2730.65 2729.018 9330.5 1 1168.4 32.6 2 K.KSEIFSTYADNQPGVLIQVFEGER.A MPG1_YEAST 2 2 9.7% 361 39566 6.3 U (P41940) Mannose-1-phosphate guanyltransferase (EC 2.7.7.13) (ATP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) (NDP-hexose pyrophosphorylase) * bir1-03.19915.19915.2 2.8999 0.1375 2197.47 2197.583 7537.0 8 262.2 34.2 1 F.VGNRINAGLYILNPEVIDLI.E * bir1-01.18091.18091.2 2.9202 0.3802 1642.83 1641.905 5859.0 2 330.4 46.4 1 K.DFLSGTVLYLNSLAK.R VATB_YEAST 3 5 8.9% 517 57749 5.1 U (P16140) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) * bir1-02.10580.10580.2 4.0812 0.4016 1744.17 1743.954 9128.7 1 1558.2 67.9 2 R.LALTTAEYLAYQTER.H * bir1-06.28895.28895.2 5.0122 0.5281 1907.61 1907.192 9000.0 1 1704.7 68.8 1 R.HVLTILTDMSSYADALR.E * bir1-01.18838.18838.2 3.5627 0.388 1667.21 1665.886 8090.0 1 1676.2 76.9 2 R.TVFESLDQAWSLLR.I YB06_YEAST 3 16 7.0% 698 79186 9.9 U (P38283) Hypothetical 79.2 kDa protein in CNS1-CDC28 intergenic region * bir1-06.26490.26490.3 5.1539 0.3745 2611.79 2613.798 5895.5 1 1130.9 39.8 9 R.SIIETLDDLNNLTTDAHSEINQR.L * bir1-06.26329.26329.2 5.5544 0.5257 2615.85 2613.798 9919.8 1 1952.6 56.8 3 R.SIIETLDDLNNLTTDAHSEINQR.L * bir1-06.28099.28099.3 5.4645 0.4025 2987.21 2986.357 6897.0 1 562.8 26.0 4 R.QQDINPQTIFGPIPPLHTDEIFPNPR.L ETR1_YEAST 1 19 5.4% 371 40898 8.8 U (P38071) Enoyl-[acyl-carrier protein] reductase [NADPH, B-specific] (EC 1.3.1.10) (Mitochondrial respiratory function protein 1) * bir1-04.12528.12528.2 4.0948 0.2078 2211.91 2214.48 8856.0 12 638.8 42.1 19 Y.RVFSSSSDLIKVNDLDLFSA.A DON1_YEAST 2 10 4.9% 365 40162 4.8 U (Q05610) Donuts protein 1 * bir1-04.32947.32947.2 3.2241 0.1208 2211.97 2214.181 9210.4 3 557.3 44.1 9 S.NNLFDVLNCDESEEEEEQ.D * bir1-04.33463.33463.3 3.8442 0.0833 2213.84 2214.181 12378.7 3 1340.2 38.2 1 S.NNLFDVLNCDESEEEEEQ.D YEB7_YEAST 2 123 4.7% 337 38235 5.0 U (P39996) Hypothetical 38.2 kDa protein in PMP2-VAC8 intergenic region * bir1-02.18767.18767.3 3.7711 0.1457 1801.04 1801.907 7460.2 4 948.9 43.3 6 N.SNAKTNFNLLDFSTDN.D * bir1-03.22604.22604.2 4.5511 0.2845 1803.23 1801.907 6748.2 2 616.3 53.3 117 N.SNAKTNFNLLDFSTDN.D Q12482 2 2 4.4% 902 104304 8.0 U (Q12482) Hypothetical protein YPR020C * bir1-06.25415.25415.3 3.6761 0.1436 2710.19 2710.179 9638.9 24 573.6 25.0 1 G.KKDKATMRSDLTIEDFMKILNPN.Y * bir1-02.08567.08567.2 2.6661 0.0932 1900.69 1899.201 5314.2 9 467.8 46.9 1 I.QQANETATQIVKKLGLR.G Q07442 2 2 4.2% 638 72513 6.1 U (Q07442) BDF2 protein * bir1-01.17392.17392.2 3.2788 0.2992 1701.87 1702.948 6428.4 1 929.5 67.9 1 D.LSLIETKLQGNVYHS.V * bir1-02.07177.07177.2 3.1846 0.1095 1277.05 1278.278 7443.2 17 634.9 59.1 1 S.TTNDNIGESGNR.E DCP2_YEAST 1 19 3.0% 562 61781 6.4 U (P16467) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (EC 4.1.1.-) * bir1-06.42405.42405.2 3.267 0.2116 1838.77 1839.183 9081.5 27 364.9 37.5 19 R.TVVELIKDAKNPVILAD.A YMH2_YEAST 2 2 2.7% 1545 171075 7.1 U (Q03640) Hypothetical 171.1 kDa protein in RPL6A-DAK1 intergenic region * bir1-06.27087.27087.2 3.1462 0.1532 1865.29 1867.158 9521.3 17 441.5 40.6 1 N.VFKKDPKSGKYVGNNGK.E * bir1-01.15048.15048.2 2.8662 0.2665 2563.79 2565.843 8197.9 1 369.1 33.3 1 L.GIAQINLGDPQIQQDGQISVKLGDG.H DPP3_YEAST 1 15 2.4% 711 80510 6.3 U (Q08225) Probable dipeptidyl-peptidase III (EC 3.4.14.4) (DPP III) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) * bir1-03.20177.20177.2 3.7607 0.2068 1859.31 1858.058 5275.8 2 379.6 43.8 15 Q.GSKYFIDRSTVTPDLAS.L YKM1_YEAST 1 10 1.9% 852 96022 8.4 U (P32330) Hypothetical WD-repeats containing protein YKL121w * bir1-06.23725.23725.2 3.0091 0.1052 1794.67 1797.122 8406.9 8 431.1 46.7 10 K.NGFLITASMDKTAKLW.H KIN2_YEAST 2 2 1.6% 1147 128338 9.4 U (P13186) Serine/threonine-protein kinase KIN2 (EC 2.7.1.37) * bir1-04.25875.25875.3 3.7637 0.0865 2213.6 2215.516 10390.4 1 1271.0 38.2 1 I.IDFGLSNIFDYRKQLHTF.C * bir1-02.22261.22261.2 2.5748 0.1016 2217.59 2215.516 5773.6 80 151.9 26.5 1 I.IDFGLSNIFDYRKQLHTF.C ARO1_YEAST 1 19 1.3% 1588 174754 6.3 U (P08566) Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (EC 4.2.3.4); 3-dehydroquinate dehydratase (EC 4.2.1.10) (3-dehydroquinase); Shikimate dehydrogenase (EC 1.1.1.25); Shikimate kinase (EC 2.7.1.71); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS)] * bir1-06.39097.39097.2 3.048 0.1125 2213.97 2213.612 6698.2 16 306.6 31.6 19 N.FGGAAVTIPLKLDIMQYMDE.L YKD8_YEAST 2 4 1.3% 1170 128240 7.9 U (P32862) Putative 128.2 kDa transcriptional regulatory protein in PTM1-IXR1 intergenic region * bir1-02.18691.18691.2 2.847 0.1753 1819.79 1821.046 7475.9 4 428.3 50.0 3 I.LRLNPTNSIDFNYRP.P * bir1-04.21463.21463.2 2.8192 0.1195 1708.21 1707.886 6580.2 1 673.0 57.7 1 L.RLNPTNSIDFNYRP.P CAT8_YEAST 1 32 1.1% 1433 160485 9.0 U (P39113) Regulatory protein CAT8 * bir1-06.27184.27184.2 3.9922 0.2556 1813.93 1811.989 9128.4 1 872.3 56.7 32 R.ITSEVALVHENALDNW.R Proteins Peptide IDs Copies Unfiltered 6132 52914 175842 Redundant 21 77 383 Nonredundant 21 65 364 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0