DTASelect v1.8 /wfs/bfd/3/scott/beth/tii2b /wfs/dbase/nci/yeastorf3.fasta -o true Use criteria 1.8 Minimum +1 XCorr 2.5 Minimum +2 XCorr 3.5 Minimum +3 XCorr 0.08 Minimum DeltCN 1 Minimum charge state 3 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank Include Modified peptide inclusion Any Tryptic status requirement Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 10 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN M+H+ TotalIntensity SpRank IonProportion Redundancy Sequence pI gi|7463016|pir||S77957 11 16 49.4% 269 27961 6.7 U lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes * bethtii2b-02.0294.0294.2 4.8422 0.5389 2261.82 5726.8 1 54.2% 1 R.APGSSSSGANGDGSLAQSQTGAVVR.A 6.5625 * bethtii2b-02.0299.0299.3 3.7924 0.2817 2262.22 8627.3 1 28.1% 1 R.APGSSSSGANGDGSLAQSQTGAVVR.A 6.5625 * bethtii2b-01.3060.3060.2 3.9025 0.1759 2545.52 8783.9 1 41.3% 2 R.ATNAASDFTLLELNTAANPAYNLF.W 3.5546875 * bethtii2b-06.2486.2486.3 5.1318 0.4848 3316.22 11227.6 1 27.6% 1 R.ATNAASDFTLLELNTAANPAYNLFWAGWDR.R 4.142578 * bethtii2b-06.1172.1172.3 4.1014 0.2529 2076.48 8853.3 1 38.9% 1 R.RDQNFAGATAIHHPNVAEK.R 7.4101562 * bethtii2b-06.1134.1134.2 3.8107 0.4296 1919.89 8711.3 1 50.0% 4 R.DQNFAGATAIHHPNVAEK.R 6.5078125 * bethtii2b-06.1146.1146.2 3.4802 0.3422 1870.07 6428.1 1 50.0% 1 R.VLGQLHGGPSSCSATGADR.S 7.109375 * bethtii2b-04.0734.0734.2 3.7228 0.4024 1428.12 5195.1 1 76.9% 1 R.VFTSWTGGGTSATR.L 10.0625 * bethtii2b-04.0745.0745.2 2.5754 0.2733 1181.58 7000.5 1 81.8% 1 F.TSWTGGGTSATR.L 10.0625 * bethtii2b-01.2814.2814.2 4.4951 0.3294 2506.22 9343.8 1 52.1% 2 R.LSDWLDAAGTGAQFIDGLDSTGTPP.V 3.3359375 * bethtii2b-01.2871.2871.2 4.1595 0.3832 2603.78 8841.0 1 50.0% 1 R.LSDWLDAAGTGAQFIDGLDSTGTPPV.- 3.3359375 ORFP:YDR527W 15 46 34.6% 439 50106 5.1 U YDR527W SGDID:S0002935, Chr IV from 1491097-1492416 * bethtii2b-02.0590.0590.2 3.5054 0.1228 1635.01 7397.9 1 76.9% 4 K.VLQGMSDEQIVQER.E 4.142578 * bethtii2b-02.0374.0374.2 2.5905 0.099 1193.01 8213.9 1 77.8% 1 R.EDLYNSLDPK.L 4.142578 * bethtii2b-06.1742.1742.2 4.3982 0.2921 2605.48 6928.2 1 43.8% 7 R.AKDENNTPLFAEIEGASGTWVGGNK.Q 4.4023438 * bethtii2b-02.2122.2122.2 5.3019 0.3681 2409.61 9066.3 1 54.5% 6 K.DENNTPLFAEIEGASGTWVGGNK.Q 3.9648438 * bethtii2b-02.2130.2130.2 2.8476 0.3263 1832.87 10339.0 1 67.6% 1 T.PLFAEIEGASGTWVGGNK.Q 4.4570312 * bethtii2b-05.2607.2607.2 3.1034 0.2865 2222.27 8952.1 1 52.6% 1 L.PPLDDEDVDVALEIRPMLGK.D 4.1152344 * bethtii2b-04.0395.0395.2 2.9673 0.3793 1044.25 6533.9 1 93.8% 2 K.HVQFEEAGK.E 5.6328125 * bethtii2b-05.0770.0770.2 3.8423 0.4189 2071.82 9311.4 1 62.5% 7 K.DVHFIKEESQNEINLEK.L 4.580078 * bethtii2b-02.0314.0314.2 3.9668 0.1539 1304.84 5201.6 3 85.0% 1 K.LDINDPNFNDK.L 4.142578 * bethtii2b-02.0679.0679.2 3.3883 0.3434 1397.25 7216.5 1 85.0% 1 K.NYIIEDVSECR.F 4.142578 * bethtii2b-02.1054.1054.2 3.0132 0.3722 1378.1 3783.1 1 72.7% 4 R.FDFNGDLVPPTR.Q 4.4570312 * bethtii2b-02.0992.0992.1 2.3002 0.3398 1379.29 3050.5 1 59.1% 1 R.FDFNGDLVPPTR.Q 4.4570312 * bethtii2b-02.0472.0472.2 3.5387 0.3449 1348.38 7248.9 1 90.9% 4 K.VIESLEISSDEK.F 3.9648438 * bethtii2b-06.2086.2086.2 4.1549 0.3408 1393.03 6600.1 1 85.0% 4 R.NYAIDALWLWK.Q 6.5625 * bethtii2b-06.2083.2083.1 3.5065 0.2571 1394.1 5512.2 2 70.0% 2 R.NYAIDALWLWK.Q 6.5625 ORFP:YNL096C 3 3 20.0% 190 21634 9.9 U RPS7B SGDID:S0005040, Chr XIV from 443395-443538,443884-444312, reverse complement * bethtii2b-04.0958.0958.2 2.6288 0.203 1626.07 4802.7 1 57.1% 1 K.ILSQAPSELELQVAK.T 4.4570312 * bethtii2b-02.0919.0919.2 3.2473 0.1745 1467.82 7594.5 1 70.8% 1 K.TFIDLESSSPELK.A 4.142578 bethtii2b-02.0635.0635.1 1.8927 0.0801 1198.18 8801.2 1 66.7% 1 K.LESFQAVYNK.L 6.5625 KERATIN02 6 6 19.3% 622 61987 5.2 U no description * bethtii2b-04.0347.0347.2 3.1001 0.2445 1233.03 6169.2 1 50.0% 1 T.SGGGGGGGLGSGGSIR.S 10.0625 * bethtii2b-04.0905.0905.2 3.7616 0.4756 2023.03 9040.4 1 41.3% 1 Y.SYGGGSGGGFSASSLGGGFGGGSR.G 9.078125 * bethtii2b-06.2123.2123.3 3.5276 0.3878 2902.73 4533.6 1 24.0% 1 K.NYSPYYNTIDDLKDQIVDLTVGNNK.T 4.4023438 * bethtii2b-02.0678.0678.1 2.2348 0.088 1062.19 2322.4 5 68.8% 1 K.TLLDIDNTR.M 4.4570312 * bethtii2b-05.2131.2131.3 4.4636 0.3499 3265.09 9902.5 1 25.9% 1 K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E 4.1152344 * bethtii2b-02.1466.1466.2 3.3765 0.2068 2097.44 7549.2 1 59.4% 1 R.QEIECQNQEYSLLLSIK.M 4.142578 NRL_1MCOH 5 5 17.8% 428 46852 8.9 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H... * bethtii2b-05.0886.0886.1 2.6257 0.3562 1187.24 6582.8 1 59.1% 1 K.GPSVFPLAPSSK.S 9.078125 * bethtii2b-06.1914.1914.2 3.851 0.4548 1809.18 7909.3 1 60.0% 1 R.VVSVLTVLHQNWLDGK.E 7.328125 * bethtii2b-02.1479.1479.3 3.7843 0.361 3817.1 10761.8 1 20.3% 1 T.KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK.T 4.8945312 * bethtii2b-02.1479.1479.2 4.1575 0.4365 2545.35 10761.8 1 47.6% 1 K.GFYPSDIAVEWESNGQPENNYK.T 3.9648438 * bethtii2b-02.1520.1520.2 3.9556 0.4396 1671.95 8886.3 1 64.3% 1 T.PPVLDSDGSFFLYSK.L 4.4570312 KERATIN22 9 9 17.4% 645 65865 8.0 U no description * bethtii2b-04.0484.0484.1 1.8396 0.1041 1254.46 3227.4 2 46.2% 1 R.GFSSGSAVVSGGSR.R 10.0625 * bethtii2b-06.1175.1175.2 4.4365 0.5779 1320.97 6281.3 1 80.0% 1 R.HGGGGGGFGGGGFGSR.S 10.0625 * bethtii2b-05.1320.1320.2 2.7036 0.2034 2398.91 8677.5 1 48.3% 1 G.GSGFGGGSGFGGGSGFSGGGFGGGGFGGGR.F 10.0625 bethtii2b-04.0701.0701.1 2.1427 0.117 1215.1 3625.9 13 61.1% 1 L.EQQNQVLQTK.W 6.5625 * bethtii2b-02.0619.0619.2 3.1483 0.3421 1208.86 5191.1 2 80.0% 1 R.TAAENDFVTLK.K 4.4570312 * bethtii2b-02.0554.0554.1 1.8169 0.1761 1193.34 4455.3 1 72.2% 1 K.YEELQVTVGR.H 4.4570312 * bethtii2b-02.0548.0548.2 3.134 0.3024 1193.78 8342.6 1 88.9% 1 K.YEELQVTVGR.H 4.4570312 * bethtii2b-02.0858.0858.2 4.5313 0.2853 1371.98 7947.3 1 86.4% 1 K.LNDLEEALQQAK.E 4.142578 bethtii2b-02.0640.0640.1 2.4601 0.1541 1139.2 6592.3 1 75.0% 1 R.DYQELMNVK.L 4.4570312 KERATIN03 10 11 17.4% 593 59519 5.2 U no description * bethtii2b-05.2258.2258.3 4.0549 0.1915 2368.19 10966.6 2 31.2% 1 K.NQILNLTTDNANILLQIDNAR.L 4.4570312 * bethtii2b-04.1107.1107.2 3.0561 0.3381 1235.15 3888.7 1 83.3% 1 R.LKYENEVALR.Q 6.5625 * bethtii2b-02.0699.0699.1 2.5761 0.1664 1033.21 4119.0 5 68.8% 1 R.VLDELTLTK.A 4.4570312 * bethtii2b-05.2814.2814.2 2.6538 0.1106 2097.38 9458.9 1 50.0% 1 K.ADLEMQIESLTEELAYLK.K 3.8554688 * bethtii2b-02.0327.0327.2 3.7786 0.3288 1365.32 8058.7 1 85.0% 1 R.SQYEQLAEQNR.K 4.4570312 * bethtii2b-04.0340.0340.2 2.701 0.1659 1493.28 9751.4 1 59.1% 1 R.SQYEQLAEQNRK.D 6.5625 * bethtii2b-02.0694.0694.1 2.2779 0.1909 1110.08 4788.2 1 68.8% 1 K.DAEAWFNEK.S 4.142578 * bethtii2b-02.0634.0634.2 3.4574 0.4074 1391.33 5413.6 1 66.7% 1 K.QSLEASLAETEGR.Y 4.142578 * bethtii2b-05.0723.0723.2 4.1806 0.3084 1434.83 10605.6 1 80.0% 2 K.IRLENEIQTYR.S 6.5625 * bethtii2b-02.0324.0324.2 3.734 0.2705 1165.22 7731.7 1 93.8% 1 R.LENEIQTYR.S 4.4570312 KERATIN13 9 10 15.6% 643 65494 6.6 U no description * bethtii2b-02.1574.1574.2 4.0127 0.4752 1966.49 6214.1 1 53.1% 2 N.QSLLQPLNVEIDPEIQK.V 4.142578 * bethtii2b-04.1195.1195.1 3.1945 0.2375 1384.33 5377.0 1 68.2% 1 K.SLNNQFASFIDK.V 6.5625 bethtii2b-04.0701.0701.1 2.1427 0.117 1215.1 3625.9 13 61.1% 1 L.EQQNQVLQTK.W 6.5625 * bethtii2b-06.2024.2024.2 3.6181 0.3593 1998.09 5478.0 1 46.7% 1 R.THNLEPYFESFINNLR.R 5.6328125 * bethtii2b-02.0611.0611.1 2.1684 0.1466 1267.2 3994.4 22 55.0% 1 R.TNAENEFVTIK.K 4.4570312 * bethtii2b-04.0643.0643.2 2.9045 0.2821 1394.41 9404.4 1 63.6% 1 R.TNAENEFVTIKK.D 6.5625 * bethtii2b-02.0526.0526.1 2.0751 0.1638 1179.21 4610.6 1 66.7% 1 K.YEELQITAGR.H 4.4570312 * bethtii2b-02.0762.0762.1 2.5986 0.2235 1358.23 5074.0 1 63.6% 1 K.LNDLEDALQQAK.E 4.142578 * bethtii2b-06.1540.1540.1 2.2474 0.2228 1277.32 3835.7 4 60.0% 1 K.LALDLEIATYR.T 4.4570312 ORFP:YOR096W 2 2 12.6% 190 21622 9.8 U RPS7A SGDID:S0005622, Chr XV from 505793-505936,506338-506766 * bethtii2b-02.1903.1903.2 2.8623 0.1852 1572.97 5104.9 3 57.7% 1 K.ILEDLVFPTEIVGK.R 4.142578 bethtii2b-02.0635.0635.1 1.8927 0.0801 1198.18 8801.2 1 66.7% 1 K.LESFQAVYNK.L 6.5625 KERATIN21 3 3 10.6% 357 39219 5.2 U no description bethtii2b-06.1979.1979.2 2.8399 0.2562 1890.76 5938.6 1 50.0% 1 -.QNLEPLFEQYINNLR.R 4.4570312 bethtii2b-02.0655.0655.2 2.9702 0.2314 1222.33 6394.3 1 70.0% 1 R.TAAENEFVTLK.K 4.4570312 bethtii2b-02.1454.1454.2 2.6293 0.2481 1408.11 7579.9 1 72.7% 1 K.ADTLTDEINFLR.A 4.142578 ORFP:YBR031W 2 2 10.2% 362 39092 10.6 U RPL4A SGDID:S0000235, Chr II from 300125-301213 ORFP:YDR012W 2 2 10.2% 362 39062 10.6 U RPL4B SGDID:S0002419, Chr IV from 471849-472937 bethtii2b-04.2277.2277.2 3.9781 0.4099 1881.82 5088.5 1 62.5% 1 K.IPEIPLVVSTDLESIQK.T 4.142578 bethtii2b-05.0830.0830.2 2.7492 0.2836 2113.37 8762.3 2 36.8% 1 R.IINSSEIQSAIRPAGQATQK.R 9.078125 ORFP:YGR214W 2 2 9.9% 252 28024 4.7 U RPS0A SGDID:S0003446, Chr VII from 920570-920659,921115-921783 ORFP:YLR048W 2 2 9.9% 252 27962 4.7 U RPS0B SGDID:S0004038, Chr XII from 242233-242322,242682-243350 bethtii2b-04.1647.1647.1 2.0765 0.1878 1283.16 6030.5 1 63.6% 1 I.PNPEDVVAISSR.T 4.4570312 bethtii2b-06.1136.1136.2 2.6676 0.2985 1270.09 5278.8 1 75.0% 1 K.FAAHTGATPIAGR.F 10.0625 KERATIN07 2 3 5.9% 473 50915 5.5 U no description * bethtii2b-02.1274.1274.2 3.6998 0.4475 2064.67 6290.6 1 52.8% 2 K.IIAATIENAQPILQIDNAR.L 4.4570312 bethtii2b-02.0751.0751.2 3.1706 0.1835 1029.95 4814.8 2 87.5% 1 R.VLDELTLAR.T 4.4570312 ORFP:YKR061W 1 38 4.2% 425 50651 5.8 U KTR2 SGDID:S0001769, Chr XI from 557313-558590 * bethtii2b-06.1398.1398.2 4.0417 0.1869 2212.24 8968.1 1 58.8% 38 D.SNHPDNIDLNVISCLRRW.W 7.109375 KERATIN05 2 2 3.8% 471 51531 5.2 U no description bethtii2b-02.0751.0751.2 3.1706 0.1835 1029.95 4814.8 2 87.5% 1 R.VLDELTLAR.A 4.4570312 * bethtii2b-02.1218.1218.1 1.9303 0.2048 1172.87 7252.9 2 56.2% 1 K.DAEEWFFTK.T 4.142578 KERATIN08 2 2 3.8% 469 50499 5.0 U no description bethtii2b-02.0751.0751.2 3.1706 0.1835 1029.95 4814.8 2 87.5% 1 R.VLDELTLAR.T 4.4570312 * bethtii2b-02.1044.1044.1 2.4194 0.2099 1097.52 5938.6 2 68.8% 1 R.DAETWFLSK.T 4.4570312 KERATIN15 2 3 3.5% 629 64511 6.5 U no description * bethtii2b-02.1942.1942.1 2.5259 0.1148 1304.2 4097.2 15 50.0% 2 R.SLDLDSIIAEVGA.Q 3.4726562 bethtii2b-02.0640.0640.1 2.4601 0.1541 1139.2 6592.3 1 75.0% 1 R.DYQELMNVK.L 4.4570312 ORFP:YHR205W 1 10 2.5% 824 91812 6.1 U SCH9 SGDID:S0001248, Chr VIII from 509359-511833 * bethtii2b-05.1434.1434.2 3.6747 0.0914 2225.25 6994.5 21 40.0% 10 N.EIAHTIGERNILVTTASKSSP.F 7.328125 Proteins Peptide IDs Copies Unfiltered 4882 8776 17311 Redundant 20 87 173 Nonredundant 18 82 168 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0