DTASelect v2.0.3 /data/1/catclw/Projects/SPB/SPB /scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta SEQUEST 3.0 in SQT format. --modstat -p 1 true Use criteria 0.0 Minimum peptide confidence 0.05 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 9 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement true Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 1000 Minimum redundancy for low coverage loci 1 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence YIL002W-A 8 8 79.7% 69 7729 4.7 U YIL002W-A SGDID:S000028835, Chr IX from 350298-350507, Uncharacterized ORF, "Identified by expression profiling and mass spectrometry" * 08312006.01278.01278.2 3.0438 0.4431 100.0 1190.8121 1191.237 3253.1 1 7.88 72.7 1 R.DTPEDVSTAGAK.D * 08312006.01282.01282.1 2.2445 0.3343 100.0 1191.45 1191.237 6314.6 2 6.707 45.5 1 R.DTPEDVSTAGAK.D * 08312006.04104.04104.3 2.5866 0.2841 100.0 2328.2944 2328.622 4107.1 1 5.177 34.5 1 R.DTPEDVSTAGAKDILDVLNLLK.G * 08312006.04092.04092.2 4.5461 0.5021 100.0 2328.7922 2328.622 9324.7 1 9.051 40.5 1 R.DTPEDVSTAGAKDILDVLNLLK.G * 08312006.03946.03946.2 3.5856 0.3306 100.0 1156.2722 1156.4081 5596.0 2 7.088 77.8 1 K.DILDVLNLLK.G * 08312006.03948.03948.1 3.3118 0.3593 100.0 1157.71 1156.4081 7838.7 1 6.697 72.2 1 K.DILDVLNLLK.G * 08312006.02335.02335.2 3.1414 0.3665 100.0 1564.9922 1563.8036 7079.2 1 5.895 58.3 1 K.ISEVELKLDEMEK.K * 08312006.02928.02928.3 3.2744 0.3498 100.0 2341.7944 2340.6135 5126.4 1 6.158 31.6 1 K.MDSLLVQLEDLHRDNNDLAK.S YBR109C 3 4 55.1% 147 16135 4.3 U CMD1 SGDID:S000000313, Chr II from 458356-457913, reverse complement, Verified ORF, "Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca++ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin" * 08312006.03063.03063.3 5.3458 0.479 100.0 2602.9143 2603.8633 9002.1 1 8.723 31.5 1 K.EAFALFDKDNNGSISSSELATVMR.S * 08312006.04306.04306.3 4.9941 0.4949 100.0 4110.474 4109.526 6539.9 1 6.668 23.6 2 R.SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR.Q * 08312006.03518.03518.2 5.4312 0.6187 100.0 2107.632 2107.325 5923.9 1 11.144 52.6 1 R.EVSDGSGEINIQQFAALLSK.- YKL042W 14 15 46.0% 363 42271 7.9 U SPC42 SGDID:S000001525, Chr XI from 358119-359210, Verified ORF, "Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane" * 08312006.02802.02802.2 4.0157 0.4633 100.0 2607.4722 2608.7546 4398.5 1 7.718 50.0 1 R.LYDDYYNIPYQYSNPT*PMNR.D * 08312006.01202.01202.1 1.6637 0.2134 100.0 925.43 925.93036 3661.1 15 4.618 64.3 1 R.DYNDVGSR.I * 08312006.02439.02439.2 3.9558 0.3677 100.0 2597.7922 2598.7546 4714.8 1 6.917 42.9 1 K.VKDPMVDDDPVS*ENYDQINVPK.H * 08312006.02442.02442.3 3.5477 0.3094 100.0 2598.6243 2598.7546 6537.0 1 5.672 34.5 1 K.VKDPMVDDDPVS*ENYDQINVPK.H * 08312006.03162.03162.3 4.0244 0.3706 100.0 2845.5544 2846.058 6961.4 1 6.206 25.0 1 R.SEDGNNDRMS*PLPSPLNTILPINNR.L * 08312006.03367.03367.3 3.7286 0.3729 100.0 2925.5645 2926.058 9283.1 1 5.87 26.0 1 R.SEDGNNDRMS*PLPS*PLNTILPINNR.L * 08312006.02644.02644.2 3.7914 0.443 100.0 1958.1322 1958.1624 4162.4 1 7.965 50.0 1 K.VNPSDDDIMMYESAELK.R * 08312006.01892.01892.2 3.0533 0.1857 98.5 1275.7122 1274.4136 5050.5 1 5.188 77.8 1 K.RVEEEIEELK.R * 08312006.03438.03438.3 4.696 0.4771 100.0 3063.2043 3064.4097 8883.2 1 7.262 27.9 1 K.LSLNNQLQELQSMMDGDDNIKLDNVSK.H * 08312006.02158.02158.2 4.4024 0.6429 100.0 2255.0723 2254.2546 5605.2 1 10.727 55.6 1 R.DYSPSSDACLECSNDLYEK.N * 08312006.01880.01880.2 2.5977 0.3831 100.0 2227.9521 2228.355 6257.8 1 5.543 41.7 1 R.VKPENNMSETFATPT*PNNR.- * 08312006.01831.01831.2 2.7319 0.2745 97.0 2228.372 2228.355 5363.7 1 5.07 44.4 2 R.VKPENNMSETFAT*PTPNNR.- * 08312006.01795.01795.3 4.1287 0.4226 100.0 2230.1042 2228.355 7191.2 1 6.198 36.1 1 R.VKPENNMSETFAT*PTPNNR.- * 08312006.01842.01842.2 2.8391 0.2192 95.0 2307.9922 2308.355 5387.7 1 5.384 38.9 1 R.VKPENNMS*ETFATPT*PNNR.- contaminant_SPA1_STAAU 18 25 31.1% 524 57320 5.7 U owl|P02976| IMMUNOGLOBULIN G BINDING PROTEIN A PRECURSOR (PROTEIN A). - STAPHYLOCOCCUS... * 08312006.03242.03242.3 3.1723 0.1819 100.0 3514.0444 3513.7795 6568.9 1 4.524 21.6 2 K.ADAQQNNFNKDQQSAFYEILNMPNLNEAQR.N * 08312006.03392.03392.2 2.9335 0.4456 100.0 2382.0522 2382.6099 5668.0 1 6.835 42.1 1 K.DQQSAFYEILNMPNLNEAQR.N 08312006.02612.02612.2 4.1759 0.4416 100.0 2349.172 2349.5596 5321.2 1 6.823 45.2 2 R.NGFIQSLKDDPSQSTNVLGEAK.K 08312006.02614.02614.3 2.8454 0.1447 100.0 2350.4944 2349.5596 10876.6 1 4.056 34.5 1 R.NGFIQSLKDDPSQSTNVLGEAK.K 08312006.01694.01694.2 4.1838 0.5628 100.0 1460.2922 1461.5254 5048.4 1 9.848 73.1 2 K.DDPSQSTNVLGEAK.K 08312006.03262.03262.3 5.0974 0.3424 100.0 3285.7444 3285.5286 6921.4 1 6.884 32.7 1 K.ADNNFNKEQQNAFYEILNMPNLNEEQR.N 08312006.03318.03318.3 4.1999 0.3224 100.0 2481.1443 2481.699 6983.6 1 6.293 38.2 1 K.EQQNAFYEILNMPNLNEEQR.N 08312006.03312.03312.2 4.1212 0.4949 100.0 2481.392 2481.699 6719.7 1 9.143 52.6 1 K.EQQNAFYEILNMPNLNEEQR.N * 08312006.02670.02670.2 3.5743 0.5046 100.0 2363.152 2363.5864 5745.8 1 7.484 40.5 2 R.NGFIQSLKDDPSQSANLLSEAK.K * 08312006.02828.02828.3 4.4973 0.4626 100.0 2364.1743 2363.5864 9523.5 1 6.702 28.6 2 R.NGFIQSLKDDPSQSANLLSEAK.K * 08312006.01978.01978.2 3.9423 0.4727 100.0 1475.4122 1475.5522 5660.3 1 9.359 76.9 1 K.DDPSQSANLLSEAK.K 08312006.03284.03284.3 3.2964 0.4167 100.0 2485.8843 2486.7031 7702.2 1 6.124 30.3 1 K.EQQNAFYEILHLPNLNEEQR.N 08312006.03286.03286.2 3.4099 0.333 100.0 2487.2122 2486.7031 5979.1 1 6.162 42.1 1 K.EQQNAFYEILHLPNLNEEQR.N 08312006.02866.02866.2 3.554 0.3693 100.0 2347.632 2347.5872 5135.8 1 6.345 45.2 2 R.NGFIQSLKDDPSQSANLLAEAK.K 08312006.02715.02715.3 4.695 0.2368 100.0 2348.0344 2347.5872 8742.0 1 6.855 41.7 2 R.NGFIQSLKDDPSQSANLLAEAK.K 08312006.02026.02026.2 4.0318 0.5305 100.0 1458.9722 1459.5529 6522.2 1 9.672 76.9 1 K.DDPSQSANLLAEAK.K 08312006.03360.03360.2 3.408 0.3659 100.0 2473.5923 2473.7043 6299.6 1 6.655 36.8 1 K.EQQNAFYEILHLPNLTEEQR.N 08312006.03354.03354.3 2.7746 0.2621 100.0 2476.3743 2473.7043 6762.9 1 4.885 27.6 1 K.EQQNAFYEILHLPNLTEEQR.N YNL225C 9 10 23.4% 581 67400 6.0 U CNM67 SGDID:S000005169, Chr XIV from 224470-222725, reverse complement, Verified ORF, "Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration" * 08312006.02662.02662.3 4.3243 0.3526 100.0 3296.6042 3297.4758 7136.4 4 6.636 22.3 2 R.LDSPVS*ENGEIKDGEPIPQNWLNENHVGK.S * 08312006.02742.02742.3 3.9193 0.3663 100.0 3376.0745 3377.4758 6281.4 2 6.126 23.2 1 R.LDS*PVS*ENGEIKDGEPIPQNWLNENHVGK.S * 08312006.01878.01878.2 3.0429 0.4441 100.0 2246.4922 2246.2983 5031.1 1 6.483 38.2 1 R.DSYEENKS*PSMDQMNYAR.N * 08312006.01510.01510.2 2.5998 0.3535 100.0 1814.3922 1814.8632 3955.5 1 6.767 57.1 1 R.NTSYQES*PGLQERPK.N * 08312006.01174.01174.2 2.2855 0.2758 97.2 1276.6322 1277.3335 5142.7 41 4.586 50.0 1 K.DKS*PIGTDVHK.K * 08312006.02054.02054.2 2.0883 0.3061 97.1 1363.0721 1363.4294 5156.6 1 5.183 65.0 1 K.DVPNFIHST*PR.E * 08312006.01832.01832.3 4.4041 0.47 100.0 2967.5044 2966.9226 6677.2 1 6.488 30.8 1 R.ANEQASAQPTDEHTSPDIS*IEDCNGAK.I * 08312006.04506.04506.3 6.6609 0.622 100.0 2907.2344 2906.2585 11782.1 1 10.536 36.5 1 R.KAELFEIPIGILFFDLYDSEENSSK.L * 08312006.04658.04658.2 4.6888 0.6253 100.0 2776.132 2778.0845 8485.2 1 12.346 50.0 1 K.AELFEIPIGILFFDLYDSEENSSK.L YOR257W 3 3 16.8% 161 18751 4.6 U CDC31 SGDID:S000005783, Chr XV from 811006-811491, Verified ORF, "Component of the spindle pole body (SPB) half-bridge, required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; interacts with Kar1p" * 08312006.02916.02916.2 3.9532 0.4846 100.0 1823.6322 1823.9542 7096.5 1 8.666 67.9 1 K.REILDLIDEYDSEGR.H * 08312006.03074.03074.2 4.5297 0.5585 100.0 1667.4122 1667.7667 5540.5 1 8.906 65.4 1 R.EILDLIDEYDSEGR.H * 08312006.02179.02179.2 3.2117 0.3712 100.0 1404.9722 1405.5016 5758.3 1 7.02 72.7 1 K.ELGETLTDEELR.A YIL149C 26 36 16.4% 1679 195140 6.0 U MLP2 SGDID:S000001411, Chr IX from 68067-63028, reverse complement, Verified ORF, "Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length" * 08312006.03647.03647.2 4.2002 0.5261 100.0 2409.7522 2409.7876 4499.4 1 8.996 47.5 1 K.ISEFLNVPFESLQGVTYPVLR.K * 08312006.01958.01958.2 3.5522 0.486 100.0 1687.5521 1687.804 7119.4 1 8.116 57.7 1 K.EELNGLKDQLNEER.S * 08312006.01570.01570.2 4.0373 0.4369 100.0 1447.6721 1448.443 8975.1 1 7.827 75.0 1 R.DQGNDSLNDDLNK.E * 08312006.01526.01526.2 4.4904 0.4726 100.0 1818.9922 1819.8363 5178.6 1 8.606 63.3 4 R.DQGNDSLNDDLNKENK.L * 08312006.02591.02591.2 2.8155 0.3628 100.0 2601.2722 2601.666 7235.8 22 5.386 26.2 1 K.NDDNSCRNPEHTDVIDELIDTK.L * 08312006.02587.02587.3 5.2837 0.5835 100.0 2601.5942 2601.666 9012.1 1 9.512 35.7 1 K.NDDNSCRNPEHTDVIDELIDTK.L * 08312006.02587.02587.2 2.2227 0.2969 98.6 1734.7322 1739.8767 9012.1 1 5.218 42.9 1 R.NPEHTDVIDELIDTK.L * 08312006.04026.04026.3 2.97 0.2778 100.0 2144.3943 2145.4197 4264.3 2 4.74 39.1 1 K.FQLQNQLEDFILELEHK.T * 08312006.02378.02378.2 5.3893 0.5158 100.0 2245.7722 2246.4363 8159.0 1 10.612 63.2 2 K.ILESSNIVNENDSQAIITER.L * 08312006.01567.01567.2 2.3799 0.3124 98.6 1882.6921 1882.9966 8876.1 1 6.732 43.3 1 K.ESEISHNENKMDFSSK.E * 08312006.03722.03722.2 5.5297 0.497 100.0 2692.6921 2693.9243 6288.6 1 9.513 50.0 5 K.DANSQIQAYEEIISSNENALIELK.N * 08312006.03723.03723.3 5.6026 0.3433 100.0 2693.5745 2693.9243 8673.8 1 6.836 33.7 2 K.DANSQIQAYEEIISSNENALIELK.N * 08312006.01378.01378.2 3.9878 0.5663 100.0 1221.8121 1222.2604 8850.1 1 9.201 80.0 1 K.DAADCQAELTK.T * 08312006.01130.01130.2 3.0995 0.3769 100.0 1613.5122 1613.6812 8179.9 1 7.671 53.6 1 K.VDDTAANNGDKDHLK.L * 08312006.02168.02168.2 2.6602 0.1842 98.6 1530.2922 1529.7114 6591.2 1 5.512 72.7 1 K.ILVYESEMEQCK.Q * 08312006.01966.01966.3 3.0812 0.1492 100.0 1587.9844 1587.7294 5907.0 65 4.268 37.5 1 K.DKLEQDLHFENAK.V * 08312006.01962.01962.2 4.8263 0.387 100.0 1590.8922 1587.7294 10536.1 1 7.885 58.3 2 K.DKLEQDLHFENAK.V * 08312006.02138.02138.2 4.7705 0.5486 100.0 1735.2122 1735.7582 10126.7 1 9.539 73.3 1 K.GSGEDAEEELWNSPSK.G * 08312006.02150.02150.2 4.3785 0.4627 100.0 1814.7122 1815.7582 10655.9 2 8.259 66.7 1 K.GSGEDAEEELWNSPS*K.G * 08312006.02194.02194.2 3.7811 0.4499 100.0 1815.5721 1815.7582 10111.5 1 7.099 53.3 1 K.GSGEDAEEELWNS*PSK.G * 08312006.02607.02607.3 4.2403 0.3694 100.0 3470.9944 3472.5767 3833.6 1 6.027 25.8 1 K.GSGEDAEEELWNS*PSKGNSERPSAVAGFINQK.N * 08312006.02703.02703.3 3.2649 0.3302 100.0 3475.4944 3472.5767 5746.8 1 4.432 21.0 1 K.GSGEDAEEELWNSPS*KGNSERPSAVAGFINQK.N * 08312006.01882.01882.2 4.3574 0.5856 100.0 1686.2522 1686.7906 6701.8 1 10.361 57.1 1 K.NDVSFNDSQSMVTNK.E * 08312006.02175.02175.3 5.146 0.5382 100.0 2986.5244 2987.1382 5285.9 1 8.292 33.3 1 K.NDVSFNDSQSMVTNKENNIVDSSAAGNK.A * 08312006.01339.01339.2 2.472 0.3124 98.6 1319.7922 1319.3708 7870.3 4 6.12 62.5 1 K.ENNIVDSSAAGNK.A * 08312006.01082.01082.2 2.5214 0.3041 96.9 1698.6322 1698.741 4340.4 23 5.19 42.9 1 K.RPIESGTSS*DPDTKK.V YPL124W 4 8 16.2% 253 29280 9.5 U SPC29 SGDID:S000006045, Chr XVI from 316754-317515, Verified ORF, "Inner plaque spindle pole body (SPB) component, links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication" * 08312006.01346.01346.2 2.2469 0.2557 97.4 1217.2122 1217.2377 4138.2 1 5.127 87.5 1 K.KFQDDT*LNR.V * 08312006.01723.01723.2 3.4635 0.298 100.0 1906.3722 1905.9298 4240.2 1 5.832 50.0 1 K.LREENFSSNT*SELGNK.K * 08312006.02206.02206.2 4.3106 0.4677 100.0 1923.7322 1923.9855 6175.6 1 8.365 63.3 5 R.SSQIHIENEST*EDILK.I * 08312006.02134.02134.3 4.7146 0.5164 100.0 1923.8644 1923.9855 10096.6 1 7.705 50.0 1 R.SSQIHIENEST*EDILK.I YDR356W 14 17 15.4% 944 111782 7.1 U SPC110 SGDID:S000002764, Chr IV from 1186098-1188932, Verified ORF, "Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner" * 08312006.01710.01710.2 2.3958 0.3627 100.0 1203.3722 1203.162 4595.6 1 6.474 77.8 1 R.S*IDDTIDSTR.L * 08312006.02979.02979.2 3.2391 0.4192 100.0 1940.4122 1941.0148 9549.9 1 5.933 63.3 1 R.LFSEASQFDDS*FPEIK.A * 08312006.01286.01286.2 2.0552 0.3293 96.4 931.5722 931.981 2577.1 6 5.743 50.0 3 K.ANIPPS*PR.S * 08312006.02379.02379.2 4.6325 0.4422 100.0 2401.1921 2400.4688 10407.4 1 8.64 52.6 1 K.EKNDTLNNYDTLEEETDDLK.N * 08312006.02522.02522.2 4.5437 0.5893 100.0 2142.3323 2143.1792 8396.4 1 9.8 58.8 1 K.NDTLNNYDTLEEETDDLK.N * 08312006.02415.02415.2 3.8766 0.5835 100.0 2411.7322 2413.4705 9248.8 1 9.618 42.1 1 K.NDTLNNYDTLEEETDDLKNR.L * 08312006.02418.02418.3 3.5783 0.3389 100.0 2412.4443 2413.4705 6273.9 1 6.143 35.5 1 K.NDTLNNYDTLEEETDDLKNR.L * 08312006.02346.02346.2 5.4879 0.5878 100.0 1831.3522 1831.9744 9262.6 1 11.141 73.3 2 K.DQVLELENNSDVQSLK.L * 08312006.01614.01614.2 3.2758 0.2818 100.0 1205.9922 1206.2921 7829.0 1 6.273 83.3 1 K.DSEDKIEELK.I * 08312006.02994.02994.2 5.5709 0.4882 100.0 2350.5723 2351.5786 10277.0 1 9.419 57.9 1 K.SEQSNIQHDLNLQILNLENK.L * 08312006.01330.01330.2 3.3778 0.3401 100.0 1589.1522 1589.6592 7799.6 1 7.303 62.5 1 R.EKEELNENSNNIR.I * 08312006.01334.01334.3 2.6713 0.2498 100.0 1589.6643 1589.6592 6246.9 11 4.277 35.4 1 R.EKEELNENSNNIR.I * 08312006.02763.02763.2 3.6607 0.4648 100.0 1696.9321 1696.8113 9468.8 1 7.769 57.7 1 K.NYLSEITSLQEENR.R * 08312006.03075.03075.2 4.711 0.5972 100.0 1920.4122 1921.0858 8243.7 1 10.386 70.0 1 K.DNDSTMQLNDIISYYK.L YOR373W 13 15 14.6% 851 94104 7.0 U NUD1 SGDID:S000005900, Chr XV from 1036830-1039385, Verified ORF, "Component of the spindle pole body outer plaque, required for exit from mitosis" * 08312006.01968.01968.2 2.2053 0.3403 96.7 2101.1921 2100.1655 4091.4 15 5.61 30.6 1 K.VPSGFSGTTATS*HQEAQWK.Q * 08312006.03375.03375.3 3.5934 0.4393 100.0 3634.0444 3633.9507 8975.5 1 5.851 21.4 1 K.QYFPGIGS*GGGTNFGGAVGTANKVPESDLIVSDLVK.D * 08312006.01306.01306.2 5.017 0.4941 100.0 2171.3323 2172.152 8521.4 1 8.994 61.1 3 K.NNNNNNNNNNNNSININNK.D * 08312006.01314.01314.3 3.9879 0.3812 100.0 2172.1143 2172.152 10007.7 1 6.812 40.3 1 K.NNNNNNNNNNNNSININNK.D * 08312006.01290.01290.3 3.9957 0.3066 100.0 2627.8145 2628.6106 11169.1 1 5.699 33.0 1 K.NNNNNNNNNNNNSININNKDNAR.T * 08312006.01896.01896.2 3.5537 0.4718 100.0 2337.2722 2338.401 9889.9 1 6.96 39.5 1 K.KIQEEENLANSDDT*PLDTPK.F * 08312006.02046.02046.2 6.0849 0.6108 100.0 2129.4922 2130.2268 8069.4 1 10.882 66.7 1 K.IQEEENLANSDDTPLDTPK.F * 08312006.02052.02052.2 4.1295 0.3313 100.0 2209.5322 2210.2268 9345.9 1 8.115 50.0 1 K.IQEEENLANSDDTPLDT*PK.F * 08312006.02090.02090.2 4.0379 0.4012 100.0 2210.632 2210.2268 8224.6 1 6.971 52.8 1 K.IQEEENLANS*DDTPLDTPK.F * 08312006.01982.01982.2 4.6245 0.33 100.0 2211.3123 2210.2268 9392.9 1 7.868 58.3 1 K.IQEEENLANSDDT*PLDTPK.F * 08312006.02955.02955.3 4.4004 0.3909 100.0 3075.8342 3076.211 6753.9 1 5.437 30.0 1 K.IQEEENLANSDDTPLDT*PKFNDLFTK.N * 08312006.02471.02471.2 4.9599 0.5511 100.0 2142.5122 2143.2659 6963.3 1 10.21 58.3 1 R.VEDITSISEVNTSFNETEK.Q * 08312006.02458.02458.2 3.745 0.4366 100.0 2222.892 2223.2659 8145.8 1 8.325 50.0 1 R.VEDITSISEVNTS*FNETEK.Q YPL255W 4 4 14.0% 385 45384 6.5 U BBP1 SGDID:S000006176, Chr XVI from 67725-68882, Verified ORF, "Protein required for the spindle pole body (SPB) duplication, localized at the central plaque periphery; forms a complex with a nuclear envelope protein Mps2p and SPB components Spc29p and Kar1p; required for mitotic functions of Cdc5p" * 08312006.02740.02740.2 3.6999 0.4814 100.0 1462.8922 1462.5714 7950.6 1 7.364 70.8 1 K.DALFGTDIS*PSMK.Y * 08312006.02230.02230.2 2.6208 0.3724 100.0 1540.2922 1540.5461 4806.4 1 6.218 58.3 1 R.SNS*WSGLDSTLHR.K * 08312006.01823.01823.2 1.882 0.362 96.3 1273.5721 1273.4348 5120.0 1 5.74 55.0 1 R.SLRS*PAPIVPR.E * 08312006.03826.03826.2 5.3451 0.5249 100.0 2059.372 2059.2834 6987.9 1 8.877 65.6 1 R.DNYESEIHDLLLQLSLR.N YJR053W 3 3 10.6% 574 66087 5.9 U BFA1 SGDID:S000003814, Chr X from 533941-535665, Verified ORF, "Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis" * 08312006.03190.03190.3 4.6334 0.4912 100.0 3179.4844 3180.2068 8504.0 1 7.049 28.0 1 K.QADDDQDMEVDQDDEFLNDFQEFQNK.K * 08312006.02300.02300.2 2.0528 0.3385 96.8 1848.5521 1848.8773 3508.6 8 5.461 38.5 1 R.DWNTQQELDS*FKEK.R * 08312006.02944.02944.2 5.1722 0.7149 100.0 2355.3123 2356.5146 8945.4 1 12.104 60.0 1 R.DETIISVDEETIMDESTVNSK.R YFR028C 3 3 9.8% 551 61907 8.0 U CDC14 SGDID:S000001924, Chr VI from 210056-208401, reverse complement, Verified ORF, "Protein phosphatase required for mitotic exit; located in the nucleolus until liberated by the FEAR and Mitotic Exit Network in anaphase, enabling it to act on key substrates to effect a decrease in CDK/B-cyclin activity and mitotic exit" * 08312006.03530.03530.3 5.6056 0.4052 100.0 3250.9744 3251.5354 9532.8 1 7.366 29.6 1 K.YEHVEFGDFNVLTPDFIAFASPQEDHPK.G * 08312006.01699.01699.3 4.9983 0.4373 100.0 2992.4944 2991.04 7599.3 1 7.163 31.0 1 R.KVVIESNNS*DDESMQDTNGTSNHYPK.V * 08312006.01778.01778.3 3.1114 0.3301 100.0 2861.5444 2862.866 9909.9 1 5.507 29.2 1 K.VVIESNNS*DDESMQDTNGTSNHYPK.V YPL131W 1 1 9.4% 297 33715 6.8 U RPL5 SGDID:S000006052, Chr XVI from 303120-304013, Verified ORF, "Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly" * 08312006.04402.04402.3 4.2275 0.3177 100.0 3343.5842 3343.602 9780.0 1 5.565 22.2 1 R.SYIFGGHVSQYMEELADDDEERFSELFK.G YIR017C 1 1 9.1% 187 21590 10.1 U MET28 SGDID:S000001456, Chr IX from 384116-383553, reverse complement, Verified ORF, "Transcriptional activator in the Cbf1p-Met4p-Met28p complex, participates in the regulation of sulfur metabolism" * 08312006.02047.02047.2 2.792 0.0748 97.5 2064.2522 2064.324 7188.0 190 3.627 37.5 1 K.NFENMNKLQNLNTQINK.L contaminant_KERATIN02 2 2 8.7% 622 61987 5.2 U no description * 08312006.03610.03610.3 3.7466 0.3181 100.0 2906.3643 2904.1597 4588.4 1 6.436 21.9 1 K.NYSPYYNTIDDLKDQIVDLTVGNNK.T * 08312006.03216.03216.3 4.2808 0.4373 100.0 3265.3145 3266.413 10393.2 1 7.627 28.6 1 K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E YNL178W 1 1 7.1% 240 26503 9.4 U RPS3 SGDID:S000005122, Chr XIV from 302682-303404, Verified ORF, "Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins" * 08312006.01854.01854.2 3.2958 0.3914 100.0 1904.9521 1905.9696 5069.2 1 7.985 53.1 1 K.DYRPAEETEAQAEPVEA.- YDL229W 2 2 6.9% 613 66602 5.4 U SSB1 SGDID:S000002388, Chr IV from 44066-45907, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; interacts with the phosphatase subunit Reg1p" YNL209W 2 2 6.9% 613 66595 5.5 U SSB2 SGDID:S000005153, Chr XIV from 252060-253901, Verified ORF, "Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; may be involved in the folding of newly-synthesized polypeptide chains; member of the heat shock protein 70 (HSP70) family; homolog of SSB1" 08312006.03100.03100.2 4.1257 0.6 100.0 2160.5322 2161.4138 6646.4 1 9.624 55.6 1 K.VIDVDGNPVIEVQYLEETK.T 08312006.03572.03572.2 3.4499 0.4365 100.0 2413.7522 2412.6562 10497.6 1 8.143 36.4 1 K.IEAALSDALAALQIEDPSADELR.K YCR015C 1 1 6.9% 317 36278 7.4 U YCR015C SGDID:S000000608, Chr III from 142167-141214, reverse complement, Uncharacterized ORF, "Hypothetical protein" * 08312006.02688.02688.2 1.9161 0.3999 100.0 2772.872 2766.853 11411.8 1 5.862 26.2 1 K.TIIIS*DFDETITRVDT*ICT*IAK.L YAL005C 2 2 6.5% 642 69768 5.1 U SSA1 SGDID:S000000004, Chr I from 141433-139505, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall" YLL024C 2 2 6.6% 639 69470 5.1 U SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall" 08312006.01667.01667.2 3.7467 0.4987 100.0 1676.2522 1676.6964 6834.5 1 8.413 50.0 1 K.ATAGDTHLGGEDFDNR.L 08312006.03443.03443.2 3.0807 0.3051 98.5 2583.2122 2578.7925 11267.0 1 6.209 26.0 1 R.SINPDEAVAYGAAVQAAILTGDESSK.T YMR131C 1 1 6.3% 511 57261 4.6 U RRB1 SGDID:S000004738, Chr XIII from 534697-533162, reverse complement, Verified ORF, "Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p" * 08312006.02639.02639.3 3.5821 0.305 100.0 3701.2444 3701.7546 7663.0 1 4.914 20.2 1 K.TLLKDDNEGEDDEEDDEDDVDPVIENENIPLR.D YMR024W 1 1 6.2% 390 44000 9.4 U MRPL3 SGDID:S000004626, Chr XIII from 321874-323046, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" * 08312006.03894.03894.2 2.4923 0.3363 96.0 2781.2722 2780.832 10753.8 1 5.458 30.4 1 K.SPVFIVHVFSGEETLGEGY*GS*S*LK.E YDR171W 1 1 6.1% 375 42817 5.1 U HSP42 SGDID:S000002578, Chr IV from 806616-807743, Verified ORF, "Small cytosolic stress-induced chaperone that forms barrel-shaped oligomers and suppresses the aggregation of non-native proteins; oligomer dissociation is not required for function; involved in cytoskeleton reorganization after heat shock" * 08312006.03088.03088.2 4.2448 0.5294 100.0 2670.652 2671.828 8810.7 1 8.405 38.6 1 R.IAIEEIPDEELEFEENPNPTVEN.- YDR432W 1 1 5.3% 414 45407 5.5 U NPL3 SGDID:S000002840, Chr IV from 1328773-1330017, Verified ORF, "RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm; phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs" * 08312006.03938.03938.2 5.0982 0.5533 100.0 2439.6921 2438.6501 5258.2 1 9.97 50.0 1 R.DFDGTGALEFPSEEILVEALER.L YKL081W 1 1 5.1% 412 46520 7.8 U TEF4 SGDID:S000001564, Chr XI from 282535-282739,283066-284099, Verified ORF, "Translation elongation factor EF-1 gamma" * 08312006.03160.03160.2 2.1509 0.2443 97.4 2435.5723 2437.5806 10963.4 1 4.253 30.0 1 R.GQDFAPAFDVAPDWESYEYTK.L YKL054C 2 2 4.2% 738 83973 5.0 U DEF1 SGDID:S000001537, Chr XI from 338397-336181, reverse complement, Verified ORF, "RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII" * 08312006.01662.01662.3 5.1769 0.519 100.0 3613.7043 3614.653 9492.1 1 7.957 24.2 1 K.NNYNYYQTQNGQEQQSPNQGVAQHSEDSQQK.Q * 08312006.01708.01708.3 4.4186 0.3356 100.0 3695.6042 3694.653 12325.3 1 6.483 24.2 1 K.NNYNYYQTQNGQEQQS*PNQGVAQHSEDSQQK.Q YOL041C 1 1 3.1% 459 51942 9.4 U NOP12 SGDID:S000005401, Chr XV from 252644-251265, reverse complement, Verified ORF, "Nucleolar protein, required for pre-25S rRNA processing; contains an RNA recognition motif (RRM) and has similarity to Nop13p, Nsr1p, and putative orthologs in Drosophila and S. pombe" * 08312006.01248.01248.2 2.7255 0.0955 97.4 1448.2322 1448.6134 7198.3 72 4.835 34.6 1 K.TDETSVPLTSAAKK.V YBR235W 1 1 2.9% 1120 123998 8.5 U YBR235W SGDID:S000000439, Chr II from 686896-690258, Uncharacterized ORF, "Hypothetical protein" * 08312006.02492.02492.3 2.8761 0.1326 97.2 3558.8342 3561.1155 4807.7 35 3.687 19.4 1 K.GDQPAAITTNFDTYTLILQLAAILVTVPEWKR.T Reverse_YPL256C 1 1 2.9% 545 61697 5.8 U CLN2 SGDID:S000006177, Chr XVI from 66614-64977, reverse complement, Verified ORF, "G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p)" * 08312006.02423.02423.2 2.6325 0.3341 95.8 1968.1122 1967.8687 7945.1 1 4.759 46.7 1 R.EDVT*ADSDQSLQS*QRK.E YGL075C 1 1 2.8% 387 44585 8.3 U MPS2 SGDID:S000003043, Chr VII from 368091-366928, reverse complement, Verified ORF, "Essential membrane protein localized at the nuclear envelope and spindle pole body (SPB), required for insertion of the newly duplicated SPB into the nuclear envelope; potentially phosphorylated by Cdc28p" * 08312006.01310.01310.2 3.0261 0.4483 100.0 1182.9521 1183.1771 7218.8 1 7.53 70.0 1 K.NTEGAGIST*PR.K Reverse_YDR484W 1 1 2.3% 641 74333 5.8 U VPS52 SGDID:S000002892, Chr IV from 1422753-1424678, Verified ORF, "Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps52p-Vps53p-Vps54p, which is required for the recycling of proteins from endosomes to the late Golgi; involved in localization of actin and chitin" * 08312006.01254.01254.2 2.0502 0.2855 97.3 1651.6921 1652.8163 7728.8 1 5.168 42.9 1 K.DFDKPALMASNEADK.N YDR251W 1 2 2.2% 830 92872 8.4 U PAM1 SGDID:S000002659, Chr IV from 960608-963100, Verified ORF, "Essential protein of unknown function; exhibits variable expression during colony morphogenesis; overexpression permits survival without protein phosphatase 2A, inhibits growth, and induces a filamentous phenotype" * 08312006.01911.01911.2 3.1801 0.0587 97.4 2065.9722 2064.382 7581.0 2 4.026 52.9 2 K.MGIAMNNPNFQNEQTILK.H Reverse_YKR031C 1 1 1.9% 1683 195203 7.6 U SPO14 SGDID:S000001739, Chr XI from 506037-500986, reverse complement, Verified ORF, "Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine, producing choline and phosphatidic acid; involved in Sec14p-independent secretion; required for meiosis and spore formation; differently regulated in secretion and meiosis" * 08312006.02619.02619.3 3.1016 0.0839 97.1 3528.2644 3519.798 5283.3 1 3.054 18.5 1 K.ADDIEGSNFNTIKPIIQSLLDDLSGDDLEQNK.L YMR205C 1 1 1.0% 959 104618 6.7 U PFK2 SGDID:S000004818, Chr XIII from 674765-671886, reverse complement, Verified ORF, "Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes" * 08312006.01847.01847.2 2.0287 0.3389 96.6 1305.2722 1305.3464 8503.4 1 5.182 66.7 1 K.VHS*YTDLAYR.M Reverse_YNL139C 1 1 0.9% 1597 183930 7.7 U RLR1 SGDID:S000005083, Chr XIV from 365719-360926, reverse complement, Verified ORF, "Subunit of the THO complex, which is required for efficient transcription elongation and involved in transcriptional elongation-associated recombination; required for LacZ RNA expression from certain plasmids" * 08312006.01612.01612.2 2.983 0.314 98.5 1703.8522 1703.8944 9021.9 7 5.284 46.2 1 K.VNDWISYFNVFGNK.L YLR454W 1 1 0.6% 2628 303478 8.0 U YLR454W SGDID:S000004446, Chr XII from 1043995-1051881, Uncharacterized ORF, "The authentic, non-tagged protein was localized to the mitochondria" * 08312006.04988.04988.2 1.7787 0.3328 97.3 2278.172 2281.41 9636.3 4 4.902 31.2 1 K.HYLT*RLCNPIY*VQDLSK.H Reverse_YDL140C 1 1 0.6% 1733 191610 5.6 U RPO21 SGDID:S000002299, Chr IV from 210562-205361, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime" * 08312006.03256.03256.2 2.3493 0.0939 96.2 1355.1522 1355.592 4875.7 2 3.584 65.0 1 R.MLENHEDLLLK.G YLR024C 1 1 0.4% 1872 216777 6.3 U UBR2 SGDID:S000004014, Chr XII from 193282-187664, reverse complement, Verified ORF, "Cytoplasmic ubiquitin-protein ligase (E3)" * 08312006.05747.05747.1 1.0164 0.3569 100.0 830.31 829.9719 3159.2 211 4.888 33.3 1 K.LPTETIR.N Proteins Peptide IDs Spectra Unfiltered 5185 7813 8980 Filtered 38 151 181 Forward matches 33 146 176 Decoy matches 5 5 5 Forward FP rate 15.15 3.42 2.84 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0