DTASelect v2.0.16 /data/6/jamest/xu/aug07/hx2/parc /scratch/yates/SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta SEQUEST 3.0 in SQT format. --trypstat true Use criteria 0.0 Minimum peptide confidence 0.05 Peptide false positive rate 0.0 Minimum protein confidence 1.0 Protein false positive rate 1 Minimum charge state 16 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement false Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 1000 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN Conf% M+H+ CalcM+H+ TotalIntensity SpR ZScore IonProportion Redundancy Sequence YDR382W 4 4 39.1% 110 11050 4.1 U RPP2B SGDID:S000002790, Chr IV from 1239482-1239814, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm" * PARC_hx2_02_itms.09173.09173.2 4.1195 0.4069 100.0 1638.5122 1638.9047 6242.8 1 7.971 71.9 1 Y.LLLVQGGNAAPSAADIK.A * PARC_hx2_02_itms.07740.07740.2 4.1619 0.4154 100.0 1525.3121 1525.7452 5993.4 1 7.754 70.0 1 L.LLVQGGNAAPSAADIK.A * PARC_hx2_02_itms.07506.07506.2 4.3412 0.3909 100.0 1432.3322 1431.5425 5924.2 1 8.174 76.9 1 K.AVVESVGAEVDEAR.I * PARC_hx2_02_itms.09456.09456.2 3.5483 0.2124 100.0 1273.7722 1274.4136 8234.7 1 5.478 77.3 1 K.GSLEEIIAEGQK.K contaminant_KERATIN08 11 11 22.2% 469 50499 5.0 U no description PARC_hx2_02_itms.06531.06531.2 2.5851 0.1968 100.0 1092.2122 1091.2273 3503.9 3 4.822 87.5 1 K.VTMQNLNDR.L PARC_hx2_02_itms.07289.07289.2 4.5145 0.3676 100.0 1304.0322 1302.4241 10100.1 1 7.3 86.4 1 R.ALEEANADLEVK.I PARC_hx2_02_itms.08921.08921.1 2.4372 0.2464 100.0 1029.61 1030.2096 3700.8 21 6.094 62.5 1 R.VLDELTLAR.T PARC_hx2_02_itms.08913.08913.2 3.4834 0.2464 100.0 1030.1721 1030.2096 3876.8 1 5.793 93.8 1 R.VLDELTLAR.T PARC_hx2_02_itms.09906.09906.2 3.6048 0.3023 100.0 1277.5322 1277.4755 8967.3 1 5.574 75.0 1 R.TDLEMQIEGLK.E * PARC_hx2_02_itms.08868.08868.2 3.8583 0.4298 100.0 2088.652 2089.2415 5298.5 1 7.082 50.0 1 R.GQTGGDVNVEMDAAPGVDLSR.I PARC_hx2_02_itms.07093.07093.2 2.4426 0.2087 99.3 1221.7722 1221.3068 7219.5 12 4.589 60.0 1 K.ASLENSLEETK.G PARC_hx2_02_itms.06929.06929.2 3.5319 0.2493 100.0 1123.1721 1123.2511 5824.9 1 5.853 93.8 1 R.LEQEIATYR.R * PARC_hx2_02_itms.06957.06957.2 4.0702 0.4217 100.0 1857.3722 1857.9286 10026.8 1 7.294 58.8 1 R.LLEGEDAHLSSQQASGQS.Y * PARC_hx2_02_itms.07080.07080.2 5.1399 0.4731 100.0 2350.672 2351.4485 7962.1 1 9.251 54.8 1 R.LLEGEDAHLSSQQASGQSYSSR.E * PARC_hx2_02_itms.07077.07077.3 4.2854 0.3294 100.0 2351.5444 2351.4485 7252.6 1 6.598 38.1 1 R.LLEGEDAHLSSQQASGQSYSSR.E contaminant_KERATIN13 18 34 19.6% 643 65494 6.6 U no description PARC_hx2_02_itms.08082.08082.1 2.1583 0.1094 100.0 827.45 827.95544 9079.3 10 3.228 75.0 1 Q.FASFIDK.V PARC_hx2_02_itms.07569.07569.2 4.4513 0.0308 100.0 1476.5322 1476.6726 9583.4 3 5.835 81.8 1 R.FLEQQNQVLQTK.W PARC_hx2_02_itms.07582.07582.1 2.7066 0.0161 100.0 1476.65 1476.6726 5998.8 13 3.029 54.5 1 R.FLEQQNQVLQTK.W * PARC_hx2_02_itms.08343.08343.2 3.5997 0.3022 100.0 1302.2122 1301.4316 8516.6 1 5.911 83.3 3 K.NMQDMVEDYR.N PARC_hx2_02_itms.05019.05019.2 2.8638 0.1546 100.0 1153.1122 1153.234 6776.0 79 4.292 75.0 3 R.NKYEDEINK.R * PARC_hx2_02_itms.07743.07743.2 3.1574 0.2028 100.0 1422.5521 1422.5809 7664.9 1 5.24 77.3 1 K.RTNAENEFVTIK.K * PARC_hx2_02_itms.07931.07931.1 2.2663 0.0699 100.0 1265.47 1266.3934 8611.4 1 3.497 60.0 1 R.TNAENEFVTIK.K * PARC_hx2_02_itms.07935.07935.2 3.8324 0.2847 100.0 1265.8722 1266.3934 7609.5 1 5.967 85.0 2 R.TNAENEFVTIK.K * PARC_hx2_02_itms.07198.07198.2 3.5543 0.3203 100.0 1394.2922 1394.5675 9127.1 1 6.24 77.3 1 R.TNAENEFVTIKK.D * PARC_hx2_02_itms.06400.06400.2 3.1447 0.3136 100.0 1341.3121 1341.4607 6796.3 1 5.946 72.7 1 K.SKAEAESLYQSK.Y * PARC_hx2_02_itms.07683.07683.2 3.6485 0.2357 100.0 1180.2122 1180.303 4525.5 1 6.46 94.4 3 K.YEELQITAGR.H PARC_hx2_02_itms.07524.07524.2 2.7287 0.0671 99.3 974.0722 974.102 3488.9 6 3.879 92.9 1 K.IEISELNR.V * PARC_hx2_02_itms.06519.06519.2 2.0856 0.0318 95.6 1073.7922 1074.2223 7008.9 3 3.112 75.0 1 R.LRSEIDNVK.K * PARC_hx2_02_itms.08267.08267.3 4.1177 0.3236 100.0 1717.5844 1717.8333 5894.0 1 5.439 48.2 1 K.QISNLQQSISDAEQR.G * PARC_hx2_02_itms.08266.08266.2 4.8477 0.4432 100.0 1718.5922 1717.8333 8618.1 1 8.126 75.0 6 K.QISNLQQSISDAEQR.G * PARC_hx2_02_itms.09040.09040.1 3.2671 0.3502 100.0 1357.58 1358.4912 6925.5 1 6.533 63.6 2 K.LNDLEDALQQAK.E * PARC_hx2_02_itms.09093.09093.2 5.4889 0.2558 100.0 1359.6522 1358.4912 9518.9 1 6.641 90.9 4 K.LNDLEDALQQAK.E * PARC_hx2_02_itms.06556.06556.2 2.3187 0.129 99.3 1033.7722 1034.1112 3972.5 13 3.92 68.8 1 R.TLLEGEESR.M YMR197C 3 3 18.9% 217 24668 6.6 U VTI1 SGDID:S000004810, Chr XIII from 659197-658544, reverse complement, Verified ORF, "Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways" * PARC_hx2_02_itms.07085.07085.2 3.8035 0.3932 100.0 1455.2922 1455.6108 4817.5 1 6.201 61.5 1 K.ASLAEAPSQPLSQR.N * PARC_hx2_02_itms.09229.09229.2 4.5775 0.4025 100.0 1694.2722 1693.7673 10027.3 1 7.337 78.6 1 R.LFGDLNASNIDDDQR.Q * PARC_hx2_02_itms.08776.08776.2 2.4107 0.1378 98.0 1415.3121 1415.5425 5954.8 1 4.238 59.1 1 R.QTLFQADSYVDK.S contaminant_KERATIN03 10 14 18.7% 593 59519 5.2 U no description PARC_hx2_02_itms.06531.06531.2 2.5851 0.1968 100.0 1092.2122 1091.2273 3503.9 3 4.822 87.5 1 K.VTMQNLNDR.L PARC_hx2_02_itms.07872.07872.2 3.0152 0.2781 100.0 1202.5521 1202.3097 3367.9 1 5.957 70.0 2 R.QSVEADINGLR.R * PARC_hx2_02_itms.08627.08627.2 2.6098 0.2534 100.0 1032.2522 1032.2224 3407.4 3 4.744 87.5 1 R.VLDELTLTK.A * PARC_hx2_02_itms.06489.06489.2 3.1101 0.1704 100.0 1495.1522 1494.6041 10047.2 8 4.916 54.5 1 R.SQYEQLAEQNRK.D * PARC_hx2_02_itms.08670.08670.2 3.1897 0.1686 100.0 1109.6122 1110.1681 6245.3 1 5.872 81.2 1 K.DAEAWFNEK.S * PARC_hx2_02_itms.09781.09781.2 3.7619 0.3111 100.0 1997.5721 1998.151 5625.1 1 6.536 43.8 2 K.ELTTEIDNNIEQISSYK.S * PARC_hx2_02_itms.06717.06717.2 1.8977 0.089 95.5 1003.8522 1004.1313 5575.9 2 3.247 85.7 1 K.SEITELRR.N * PARC_hx2_02_itms.08067.08067.2 4.4192 0.4069 100.0 1394.4521 1391.4778 4889.7 1 6.688 87.5 3 K.QSLEASLAETEGR.Y * PARC_hx2_02_itms.06813.06813.2 3.845 0.2814 100.0 1166.2722 1166.2761 6832.2 1 5.265 93.8 1 R.LENEIQTYR.S * PARC_hx2_02_itms.06550.06550.2 3.6055 0.473 100.0 1262.8722 1263.3066 7089.0 1 7.401 76.9 1 R.SLLEGEGSSGGGGR.G contaminant_KERATIN05 9 10 17.4% 471 51531 5.2 U no description PARC_hx2_02_itms.06531.06531.2 2.5851 0.1968 100.0 1092.2122 1091.2273 3503.9 3 4.822 87.5 1 K.VTMQNLNDR.L PARC_hx2_02_itms.07289.07289.2 4.5145 0.3676 100.0 1304.0322 1302.4241 10100.1 1 7.3 86.4 1 R.ALEEANADLEVK.I PARC_hx2_02_itms.08921.08921.1 2.4372 0.2464 100.0 1029.61 1030.2096 3700.8 21 6.094 62.5 1 R.VLDELTLAR.A PARC_hx2_02_itms.08913.08913.2 3.4834 0.2464 100.0 1030.1721 1030.2096 3876.8 1 5.793 93.8 1 R.VLDELTLAR.A PARC_hx2_02_itms.08093.08093.2 2.4923 0.0823 98.1 1242.3522 1243.3367 4152.2 1 4.449 72.2 2 K.NHEEEMNALR.G PARC_hx2_02_itms.07093.07093.2 2.4426 0.2087 99.3 1221.7722 1221.3068 7219.5 12 4.589 60.0 1 K.ASLENSLEETK.G PARC_hx2_02_itms.06929.06929.2 3.5319 0.2493 100.0 1123.1721 1123.2511 5824.9 1 5.853 93.8 1 R.LEQEIATYR.R * PARC_hx2_02_itms.07726.07726.3 4.8061 0.3905 100.0 2309.3943 2310.396 7592.2 1 6.564 36.9 1 R.LLEGEDAHLSSSQFSSGSQSSR.D * PARC_hx2_02_itms.07732.07732.2 5.2841 0.5184 100.0 2309.5122 2310.396 8555.9 1 9.164 47.6 1 R.LLEGEDAHLSSSQFSSGSQSSR.D YOR106W 4 5 16.6% 283 32498 7.0 U VAM3 SGDID:S000005632, Chr XV from 519121-519972, Verified ORF, "Syntaxin-related protein required for vacuolar assembly; functions with Vam7p in vacuolar protein trafficking; member of the syntaxin family of proteins" * PARC_hx2_02_itms.08505.08505.2 3.3105 0.2734 100.0 1532.2122 1532.7002 3838.1 17 4.752 58.3 1 K.IETELIPNCTSVR.D * PARC_hx2_02_itms.07300.07300.2 2.828 0.0843 99.3 1367.2922 1366.5602 9000.9 1 3.936 86.4 2 K.IESNILIHQNGK.L * PARC_hx2_02_itms.06543.06543.2 3.1767 0.3326 100.0 1414.6721 1415.5051 6134.1 1 5.935 80.0 1 K.YQSLQQSYNQR.K * PARC_hx2_02_itms.07738.07738.2 1.9635 0.1884 98.1 1268.1921 1267.3782 4184.8 2 4.167 65.0 1 R.QDPESSYISIK.V contaminant_KERATIN21 7 9 16.5% 357 39219 5.2 U no description PARC_hx2_02_itms.05019.05019.2 2.8638 0.1546 100.0 1153.1122 1153.234 6776.0 79 4.292 75.0 3 K.NKYEDEINK.R PARC_hx2_02_itms.08166.08166.2 3.0268 0.2084 100.0 1223.2722 1223.3684 6546.8 3 5.495 70.0 1 R.TAAENEFVTLK.K PARC_hx2_02_itms.06365.06365.2 3.0288 0.3133 100.0 1107.9922 1108.196 5046.8 1 5.823 87.5 1 K.AQYEEIAQR.S PARC_hx2_02_itms.09112.09112.2 3.6306 0.4036 100.0 1658.9521 1659.7625 9401.0 1 7.047 67.9 1 K.QCANLQAAIADAEQR.G PARC_hx2_02_itms.09107.09107.3 3.5977 0.2384 100.0 1659.4744 1659.7625 6845.1 8 4.808 44.6 1 K.QCANLQAAIADAEQR.G PARC_hx2_02_itms.08469.08469.3 2.4816 0.0647 100.0 1673.3043 1672.876 4559.3 151 3.431 30.4 1 K.DAKNKLEGLEDALQK.A PARC_hx2_02_itms.08469.08469.2 3.408 0.2611 100.0 1115.8722 1116.2566 4559.3 1 4.573 88.9 1 K.LEGLEDALQK.A contaminant_KERATIN02 9 15 16.2% 622 61987 5.2 U no description * PARC_hx2_02_itms.06093.06093.2 3.7998 0.391 100.0 1232.6322 1233.2833 6847.0 1 8.592 73.3 1 T.SGGGGGGGLGSGGSIR.S * PARC_hx2_02_itms.07959.07959.2 4.9762 0.3017 100.0 1692.4521 1692.7826 10496.7 1 5.702 63.2 1 L.GGFGGGAGGGDGGILTANEK.S * PARC_hx2_02_itms.06094.06094.2 2.181 0.0581 95.9 1066.0322 1066.1742 5995.4 6 3.541 87.5 1 K.STMQELNSR.L * PARC_hx2_02_itms.07229.07229.1 3.5986 0.3307 100.0 1588.72 1587.6836 5580.9 1 5.928 61.5 2 K.VQALEEANNDLENK.I * PARC_hx2_02_itms.07234.07234.2 5.913 0.376 100.0 1590.3522 1587.6836 10272.8 1 7.198 88.5 4 K.VQALEEANNDLENK.I * PARC_hx2_02_itms.09418.09418.2 4.1774 0.2992 100.0 1609.3322 1606.7289 4805.6 1 6.268 83.3 3 K.NYSPYYNTIDDLK.D * PARC_hx2_02_itms.07380.07380.2 2.3691 0.1294 99.3 1066.5521 1067.2048 3950.2 18 5.189 78.6 1 K.FEMEQNLR.Q * PARC_hx2_02_itms.07432.07432.2 3.015 0.2654 100.0 1158.0521 1158.2566 3085.3 1 6.049 80.0 1 R.QGVDADINGLR.Q * PARC_hx2_02_itms.08201.08201.2 2.6717 0.2138 100.0 1190.8322 1191.385 3584.9 6 4.66 66.7 1 R.QVLDNLTMEK.S YJL177W 2 2 15.8% 184 20551 10.9 U RPL17B SGDID:S000003713, Chr X from 90784-91092,91410-91655, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins" YKL180W 2 2 15.8% 184 20549 10.9 U RPL17A SGDID:S000001663, Chr XI from 109274-109582,109889-110134, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the components of the outer kinetochore DASH complex" PARC_hx2_02_itms.08901.08901.2 3.2119 0.2887 100.0 1460.6322 1461.6146 7174.1 2 5.84 58.3 1 R.ETAQAINGWELTK.A PARC_hx2_02_itms.09479.09479.2 4.8163 0.3753 100.0 1646.3121 1645.8558 10953.0 1 6.796 76.7 1 K.FVQGLLQNAAANAEAK.G YGL212W 4 4 15.2% 316 36711 8.4 U VAM7 SGDID:S000003180, Chr VII from 91436-92386, Verified ORF, "Component of the vacuole SNARE complex involved in vacuolar morphogenesis; SNAP-25 homolog; functions with a syntaxin homolog Vam3p in vacuolar protein trafficking" * PARC_hx2_02_itms.08818.08818.2 2.6676 0.1309 99.3 1184.4122 1184.2938 4844.0 1 4.145 93.8 1 R.FLNELYNDR.F * PARC_hx2_02_itms.09538.09538.2 2.8913 0.1625 100.0 1162.9722 1163.3593 8382.0 1 5.126 88.9 1 K.IAQDFLQLSK.P * PARC_hx2_02_itms.07397.07397.2 4.0916 0.2008 100.0 1835.4521 1835.9658 8277.0 2 5.376 55.9 1 R.LLGVATSDNSSTTEVQGR.T * PARC_hx2_02_itms.07409.07409.2 4.0412 0.3339 100.0 1338.3322 1338.463 8870.1 1 6.697 80.0 1 R.DQEQELVALHR.I contaminant_KERATIN18 9 9 14.9% 562 59822 8.0 U no description * PARC_hx2_02_itms.06960.06960.2 2.3962 0.2525 99.3 1425.9722 1425.4668 9332.0 14 4.135 46.9 1 R.GSGGLGGACGGAGFGSR.S PARC_hx2_02_itms.08082.08082.1 2.1583 0.1094 100.0 827.45 827.95544 9079.3 10 3.228 75.0 1 K.FASFIDK.V PARC_hx2_02_itms.08837.08837.2 2.8864 0.0503 99.3 1204.0922 1204.3684 8820.3 1 4.072 83.3 1 K.WTLLQEQGTK.T PARC_hx2_02_itms.08166.08166.2 3.0268 0.2084 100.0 1223.2722 1223.3684 6546.8 3 5.495 70.0 1 R.TAAENEFVTLK.K PARC_hx2_02_itms.06365.06365.2 3.0288 0.3133 100.0 1107.9922 1108.196 5046.8 1 5.823 87.5 1 K.AQYEEIAQR.S PARC_hx2_02_itms.09112.09112.2 3.6306 0.4036 100.0 1658.9521 1659.7625 9401.0 1 7.047 67.9 1 K.QCANLQAAIADAEQR.G PARC_hx2_02_itms.09107.09107.3 3.5977 0.2384 100.0 1659.4744 1659.7625 6845.1 8 4.808 44.6 1 K.QCANLQAAIADAEQR.G PARC_hx2_02_itms.08469.08469.3 2.4816 0.0647 100.0 1673.3043 1672.876 4559.3 151 3.431 30.4 1 K.DAKNKLEGLEDALQK.A PARC_hx2_02_itms.08469.08469.2 3.408 0.2611 100.0 1115.8722 1116.2566 4559.3 1 4.573 88.9 1 K.LEGLEDALQK.A contaminant_KERATIN12 7 8 14.8% 431 47974 5.0 U no description * PARC_hx2_02_itms.07428.07428.2 2.1684 0.0962 95.9 1346.3922 1346.4772 6479.2 26 3.925 59.1 1 R.ALEEANTELEVK.I PARC_hx2_02_itms.08921.08921.1 2.4372 0.2464 100.0 1029.61 1030.2096 3700.8 21 6.094 62.5 1 R.VLDELTLAR.A PARC_hx2_02_itms.08913.08913.2 3.4834 0.2464 100.0 1030.1721 1030.2096 3876.8 1 5.793 93.8 1 R.VLDELTLAR.A * PARC_hx2_02_itms.09856.09856.2 3.4204 0.2505 100.0 1304.4722 1304.5011 7614.7 5 5.14 80.0 1 R.ADLEMQIENLK.E PARC_hx2_02_itms.08093.08093.2 2.4923 0.0823 98.1 1242.3522 1243.3367 4152.2 1 4.449 72.2 2 K.NHEEEMNALR.G * PARC_hx2_02_itms.07041.07041.2 3.8299 0.4168 100.0 1405.5521 1404.4764 8563.5 1 6.937 70.8 1 K.ASLEGNLAETENR.Y PARC_hx2_02_itms.06929.06929.2 3.5319 0.2493 100.0 1123.1721 1123.2511 5824.9 1 5.853 93.8 1 R.LEQEIATYR.R YNL301C 2 2 14.5% 186 20563 11.7 U RPL18B SGDID:S000005245, Chr XIV from 64562-64451,64018-63570, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl18Ap and has similarity to rat L18 ribosomal protein" YOL120C 2 2 14.5% 186 20563 11.7 U RPL18A SGDID:S000005480, Chr XV from 94401-94290,93842-93394, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl18Bp and has similarity to rat L18 ribosomal protein; intron of RPL18A pre-mRNA forms stem-loop structures that are a target for Rnt1p cleavage leading to degradation" PARC_hx2_02_itms.07594.07594.2 4.3184 0.422 100.0 1332.0322 1332.4967 8956.4 1 8.1 83.3 1 K.TVVVVGTVTDDAR.I PARC_hx2_02_itms.09712.09712.2 2.9523 0.1949 100.0 1503.2722 1503.6617 7212.4 3 5.564 57.7 1 K.AGGECITLDQLAVR.A contaminant_KERATIN22 9 10 13.5% 645 65865 8.0 U no description * PARC_hx2_02_itms.06616.06616.2 3.1835 0.2861 100.0 1255.1122 1255.3298 7508.9 1 6.667 73.1 1 R.GFSSGSAVVSGGSR.R PARC_hx2_02_itms.08082.08082.1 2.1583 0.1094 100.0 827.45 827.95544 9079.3 10 3.228 75.0 1 K.FASFIDK.V PARC_hx2_02_itms.07569.07569.2 4.4513 0.0308 100.0 1476.5322 1476.6726 9583.4 3 5.835 81.8 1 R.FLEQQNQVLQTK.W PARC_hx2_02_itms.07582.07582.1 2.7066 0.0161 100.0 1476.65 1476.6726 5998.8 13 3.029 54.5 1 R.FLEQQNQVLQTK.W PARC_hx2_02_itms.06365.06365.2 3.0288 0.3133 100.0 1107.9922 1108.196 5046.8 1 5.823 87.5 1 K.AQYEEIAQR.S * PARC_hx2_02_itms.07974.07974.2 3.719 0.3379 100.0 1194.0521 1194.33 8323.4 1 6.921 83.3 2 K.YEELQVTVGR.H PARC_hx2_02_itms.07524.07524.2 2.7287 0.0671 99.3 974.0722 974.102 3488.9 6 3.879 92.9 1 K.IEISELNR.V * PARC_hx2_02_itms.09771.09771.2 3.1015 0.1981 100.0 1745.2922 1746.8407 8609.5 2 4.866 50.0 1 K.QCKNVQDAIADAEQR.G * PARC_hx2_02_itms.09585.09585.2 5.4329 0.2727 100.0 1371.7722 1372.5181 9937.4 1 6.122 86.4 1 K.LNDLEEALQQAK.E contaminant_gi|7463016|pir||S77957 5 5 11.2% 269 27961 6.7 U lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes * PARC_hx2_02_itms.07239.07239.1 2.7782 0.3315 100.0 1748.7 1749.8718 5449.9 1 6.846 55.9 1 S.GGVTEPGSSGSPIYSPEK.R * PARC_hx2_02_itms.07206.07206.2 4.3635 0.5226 100.0 1750.2122 1749.8718 3922.9 1 8.47 64.7 1 S.GGVTEPGSSGSPIYSPEK.R * PARC_hx2_02_itms.07213.07213.2 3.4427 0.3722 100.0 1692.2322 1692.82 5848.3 1 6.799 59.4 1 G.GVTEPGSSGSPIYSPEK.R * PARC_hx2_02_itms.07057.07057.2 3.3192 0.4298 100.0 1635.8121 1635.768 4309.8 1 7.232 63.3 1 G.VTEPGSSGSPIYSPEK.R * PARC_hx2_02_itms.06753.06753.2 3.6279 0.2767 100.0 1212.1721 1212.3141 7495.7 1 6.839 81.8 1 R.VLGQLHGGPSSC.S YBR031W 3 4 11.0% 362 39092 10.6 U RPL4A SGDID:S000000235, Chr II from 300166-301254, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins" YDR012W 3 4 11.0% 362 39062 10.6 U RPL4B SGDID:S000002419, Chr IV from 471850-472938, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins" PARC_hx2_02_itms.09673.09673.2 4.4612 0.4965 100.0 1474.3722 1474.697 7903.0 1 8.768 73.1 2 R.GPLVVYAEDNGIVK.A PARC_hx2_02_itms.07954.07954.2 3.6032 0.3903 100.0 1507.1322 1507.6403 6623.1 1 6.947 65.4 1 K.LDQVWGSETVASSK.V PARC_hx2_02_itms.08446.08446.2 3.549 0.3389 100.0 1330.7122 1331.5118 10818.0 1 6.533 77.3 1 R.IINSSEIQSAIR.P contaminant_KERATIN17 7 9 10.5% 590 62461 8.1 U no description PARC_hx2_02_itms.08082.08082.1 2.1583 0.1094 100.0 827.45 827.95544 9079.3 10 3.228 75.0 1 K.FASFIDK.V PARC_hx2_02_itms.08837.08837.2 2.8864 0.0503 99.3 1204.0922 1204.3684 8820.3 1 4.072 83.3 1 K.WTLLQEQGTK.T PARC_hx2_02_itms.05019.05019.2 2.8638 0.1546 100.0 1153.1122 1153.234 6776.0 79 4.292 75.0 3 K.NKYEDEINK.R * PARC_hx2_02_itms.09219.09219.2 2.776 0.2032 100.0 1282.9722 1283.4822 7673.9 2 4.531 70.0 1 R.TTAENEFVMLK.K * PARC_hx2_02_itms.08685.08685.2 3.5218 0.4164 100.0 1702.1721 1702.7875 7969.7 1 6.715 53.6 1 K.QCANLQNAIADAEQR.G * PARC_hx2_02_itms.08686.08686.3 3.5986 0.0748 100.0 1702.2244 1702.7875 5871.4 8 4.539 46.4 1 K.QCANLQNAIADAEQR.G * PARC_hx2_02_itms.08475.08475.2 3.9472 0.2696 100.0 1144.2322 1144.3104 10531.8 1 5.261 88.9 1 K.LAELEEALQK.A YER136W 4 6 8.4% 451 51206 6.0 U GDI1 SGDID:S000000938, Chr V from 439612-440967, Verified ORF, "GDP dissociation inhibitor, regulates vesicle traffic in secretory pathways by regulating the dissociation of GDP from the Sec4/Ypt/rab family of GTP binding proteins" * PARC_hx2_02_itms.07302.07302.2 3.9515 0.3378 100.0 1585.8322 1586.6525 7978.2 1 5.941 73.1 1 K.EDDLSTHQGLDLDK.N * PARC_hx2_02_itms.07471.07471.1 1.8609 0.1244 100.0 898.67 899.0752 4771.9 1 3.344 71.4 1 K.LLGPIEEK.F * PARC_hx2_02_itms.07995.07995.2 4.4257 0.4224 100.0 1819.3322 1819.8939 9929.8 1 8.011 70.0 3 R.SYDASSHFESMTDDVK.D * PARC_hx2_02_itms.07992.07992.3 2.5676 0.1895 100.0 1821.6843 1819.8939 4582.0 2 4.151 40.0 1 R.SYDASSHFESMTDDVK.D contaminant_KERATIN04 3 4 7.0% 458 49644 4.9 U no description PARC_hx2_02_itms.07289.07289.2 4.5145 0.3676 100.0 1304.0322 1302.4241 10100.1 1 7.3 86.4 1 R.ALEEANADLEVK.I PARC_hx2_02_itms.07872.07872.2 3.0152 0.2781 100.0 1202.5521 1202.3097 3367.9 1 5.957 70.0 2 R.QSVEADINGLR.R PARC_hx2_02_itms.06929.06929.2 3.5319 0.2493 100.0 1123.1721 1123.2511 5824.9 1 5.853 93.8 1 R.LEQEIATYR.S YAL005C 3 3 6.9% 642 69768 5.1 U SSA1 SGDID:S000000004, Chr I from 141433-139505, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall" * PARC_hx2_02_itms.09744.09744.2 2.5615 0.2918 100.0 1471.4122 1472.5945 5311.7 1 5.784 62.5 1 R.TTPSFVAFTDTER.L PARC_hx2_02_itms.06816.06816.2 2.6633 0.2136 99.3 1676.3722 1676.6964 9339.2 2 4.848 43.3 1 K.ATAGDTHLGGEDFDNR.L PARC_hx2_02_itms.07211.07211.2 3.3884 0.2531 100.0 1619.9922 1619.7258 5822.7 1 5.296 71.4 1 K.NTISEAGDKLEQADK.D YLL024C 3 3 6.9% 639 69470 5.1 U SSA2 SGDID:S000003947, Chr XII from 97484-95565, reverse complement, Verified ORF, "ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall" * PARC_hx2_02_itms.09303.09303.2 2.9493 0.3842 100.0 1457.8722 1458.5676 4154.7 1 6.756 70.8 1 R.TTPSFVGFTDTER.L PARC_hx2_02_itms.06816.06816.2 2.6633 0.2136 99.3 1676.3722 1676.6964 9339.2 2 4.848 43.3 1 K.ATAGDTHLGGEDFDNR.L PARC_hx2_02_itms.07211.07211.2 3.3884 0.2531 100.0 1619.9922 1619.7258 5822.7 1 5.296 71.4 1 K.NTISEAGDKLEQADK.D YOR270C 4 4 6.2% 840 95529 5.5 U VPH1 SGDID:S000005796, Chr XV from 830571-828049, reverse complement, Verified ORF, "Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V-ATPase complexes of the vacuole while Stv1p is located in V-ATPase complexes of the Golgi and endosomes" * PARC_hx2_02_itms.08827.08827.2 4.8676 0.2726 100.0 1761.6122 1761.985 10514.7 1 5.762 75.0 1 R.LIQMEDATDQIEVQK.N * PARC_hx2_02_itms.08211.08211.3 2.5064 0.0692 100.0 2129.7244 2127.4448 9029.3 17 3.248 26.5 1 R.GNLFFKTVEIEQPVYDVK.T * PARC_hx2_02_itms.08211.08211.2 4.4789 0.3122 100.0 1420.1522 1420.6024 9029.3 1 5.997 81.8 1 K.TVEIEQPVYDVK.T * PARC_hx2_02_itms.09210.09210.2 4.7048 0.5061 100.0 2069.172 2069.146 8552.5 1 9.487 58.3 1 K.IAESLDANLYDVDSSNEGR.S YLR058C 2 2 5.8% 469 52219 7.4 U SHM2 SGDID:S000004048, Chr XII from 259402-257993, reverse complement, Verified ORF, "Cytosolic serine hydroxymethyltransferase, involved in one-carbon metabolism" * PARC_hx2_02_itms.09790.09790.2 3.3712 0.404 100.0 1709.9922 1707.8749 3882.9 1 7.065 71.4 1 R.VNPETGIIDYDTLEK.N * PARC_hx2_02_itms.08885.08885.2 3.7815 0.2876 100.0 1363.2722 1363.4668 6464.0 1 6.8 81.8 1 K.VDEGSDVLNTWK.K contaminant_KERATIN16 3 5 5.2% 534 57265 6.6 U no description PARC_hx2_02_itms.08082.08082.1 2.1583 0.1094 100.0 827.45 827.95544 9079.3 10 3.228 75.0 1 K.FASFIDK.V PARC_hx2_02_itms.07731.07731.2 4.7128 0.2596 100.0 1477.4722 1477.7007 11680.4 1 5.926 81.8 3 Q.FLEQQNKVLETK.W PARC_hx2_02_itms.06365.06365.2 3.0288 0.3133 100.0 1107.9922 1108.196 5046.8 1 5.823 87.5 1 R.AQYEEIAQR.S YML123C 2 2 5.1% 587 64382 6.4 U PHO84 SGDID:S000004592, Chr XIII from 25801-24038, reverse complement, Verified ORF, "High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p" * PARC_hx2_02_itms.07096.07096.2 4.7514 0.4523 100.0 1473.0322 1473.5798 7272.9 1 8.285 76.9 1 K.LELAAAAQEQDGEK.K * PARC_hx2_02_itms.06925.06925.2 2.8164 0.2815 100.0 1756.0721 1756.7802 9261.4 1 5.975 56.7 1 K.NNDIESSSPSQLQHEA.- YAL038W 2 2 4.8% 500 54545 7.7 U CDC19 SGDID:S000000036, Chr I from 71787-73289, Verified ORF, "Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration" * PARC_hx2_02_itms.08459.08459.2 2.7639 0.166 99.2 1228.2922 1228.391 6022.7 1 4.573 75.0 1 K.TNNPETLVALR.K * PARC_hx2_02_itms.08477.08477.2 2.8885 0.3593 100.0 1519.1122 1519.5646 8885.1 1 7.14 45.8 1 K.EPVSDWTDDVEAR.I YOR291W 2 2 1.9% 1472 166749 6.1 U YOR291W SGDID:S000005817, Chr XV from 861172-865590, Uncharacterized ORF, "Hypothetical protein" * PARC_hx2_02_itms.08536.08536.2 3.9273 0.4695 100.0 1746.7522 1746.9121 5438.4 1 7.884 60.0 1 R.LTESEPLVLSSAEQSR.S * PARC_hx2_02_itms.09815.09815.2 3.0554 0.4797 100.0 1490.3121 1490.5688 7798.3 1 7.601 63.6 1 K.TNNDDVYWSFTK.G Proteins Peptide IDs Spectra Unfiltered 2823 3553 3958 Filtered 28 117 151 Forward matches 28 117 151 Decoy matches 0 0 0 Forward FP rate 0.0 0.0 0.0 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0