DTASelect v1.9 /wfs/bfd/3/scott/beth/ti5g_2 /wfs/dbase/nci/yeastorf3.fasta SEQUEST v.27 in SQT format. -o true Use criteria 1.8 Minimum +1 XCorr 2.5 Minimum +2 XCorr 3.5 Minimum +3 XCorr 0.08 Minimum DeltCN 1 Minimum charge state 3 Maximum charge state 0.0 Minimum ion proportion 1000 Maximum Sp rank -1.0 Minimum Sp score Include Modified peptide inclusion Any Tryptic status requirement true Multiple, ambiguous IDs allowed Ignore Peptide validation handling XCorr Purge duplicate peptides by protein false Include only loci with unique peptide true Remove subset proteins Ignore Locus validation handling 0 Minimum modified peptides per locus 10 Minimum redundancy for low coverage loci 2 Minimum peptides per locus Locus Sequence Count Spectrum Count Sequence Coverage Length MolWt pI Validation Status Descriptive Name Unique FileName XCorr DeltCN M+H+ CalcM+H+ TotalIntensity SpRank SpScore IonProportion Redundancy Sequence ORFP:YAL033W 6 6 41.0% 173 19574 7.8 U POP5 SGDID:S0000031, Chr I from 82708-83229 * bethti5g-01.2811.2811.2 3.2137 0.2691 2442.2 2442.768 3521.7 1 337.8 42.5 1 R.YILFEIIFPPTDTNVEESVSK.A * bethti5g-06.1293.1293.2 3.0627 0.3247 1062.05 1062.217 5855.1 1 780.0 81.2 1 K.ADILLSHHR.A * bethti5g-06.1484.1484.2 3.3407 0.3082 1481.66 1481.649 5391.8 1 765.0 69.2 1 R.RSLSLNLGDYGSAK.C * bethti5g-02.1265.1265.2 3.2114 0.4448 1325.06 1325.461 6223.8 1 801.4 70.8 1 R.SLSLNLGDYGSAK.C * bethti5g-01.1451.1451.2 2.5702 0.1349 975.85 976.127 7435.8 4 954.3 92.9 1 K.CNSLLQLK.Y * bethti5g-06.1510.1510.2 3.6676 0.3916 2258.25 2256.4 6829.6 1 569.7 47.2 1 K.CSQSSHLSDNDFIINDFKK.I ORFP:YHR062C 9 31 35.2% 293 32224 9.7 U RPP1 SGDID:S0001104, Chr VIII from 222878-223759, reverse complement * bethti5g-01.1272.1272.2 2.9655 0.0821 1186.62 1187.382 6446.5 1 928.0 70.0 1 K.VTSQAVNNLIK.T * bethti5g-01.0242.0242.1 2.056 0.0823 925.26 926.144 4610.2 5 468.2 71.4 1 K.LLNPIDIK.R * bethti5g-01.2138.2138.2 4.0606 0.4602 1703.48 1702.988 9143.6 1 1270.7 63.3 12 K.ISQAFDIVAALPISEK.G * bethti5g-01.2532.2532.2 5.2133 0.5486 2329.19 2329.612 8127.6 1 1580.7 57.5 5 K.GLTLSTTNLDIDLLTFQYGSR.L * bethti5g-06.1220.1220.2 3.4325 0.38 1005.49 1006.153 6625.1 1 1119.3 100.0 1 R.RQFVSNVR.S * bethti5g-01.1751.1751.2 4.4442 0.4759 1549.54 1547.776 8140.7 1 1596.9 75.0 5 R.GIVIGSGAMSPLECR.N * bethti5g-01.2026.2026.1 2.097 0.1798 1057.18 1058.307 5695.1 9 389.9 66.7 1 R.NILGVTSLIK.N * bethti5g-01.2030.2030.2 3.2052 0.2078 1057.22 1058.307 3402.0 2 585.2 77.8 2 R.NILGVTSLIK.N * bethti5g-01.2347.2347.2 4.8532 0.3415 1429.95 1430.706 8998.0 1 2011.2 76.9 3 K.AMGDLASLVLLNGR.L NRL_1MCOH 9 21 31.8% 428 46852 8.9 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain H... * bethti5g-02.1107.1107.2 2.8125 0.2407 1187.04 1187.381 4523.7 1 774.0 68.2 4 K.GPSVFPLAPSSK.S * bethti5g-01.1319.1319.2 3.2206 0.3875 1321.73 1322.467 8460.8 1 1138.3 69.2 3 K.STSGGTAALGCLVK.D * bethti5g-01.2623.2623.3 3.6523 0.3777 3526.3 3527.915 9067.1 1 920.7 26.6 1 K.DYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLY.S * bethti5g-06.1580.1580.2 3.557 0.2742 1679.06 1677.859 7821.8 1 1523.7 76.9 1 K.FNWYVDGVQVHNAK.T * bethti5g-06.2372.2372.2 3.2834 0.3274 1809.43 1809.119 6673.8 1 1266.3 70.0 7 R.VVSVLTVLHQNWLDGK.E * bethti5g-01.1562.1562.1 2.3601 0.1117 1161.12 1162.338 4392.3 50 161.8 50.0 1 K.NQVSLTCLVK.G * bethti5g-01.1550.1550.2 3.0597 0.1701 1162.01 1162.338 5926.5 1 806.5 77.8 2 K.NQVSLTCLVK.G * bethti5g-02.2157.2157.2 2.8477 0.4217 2544.82 2545.681 7825.9 1 826.7 45.2 1 K.GFYPSDIAVEWESNGQPENNYK.T * bethti5g-02.2158.2158.2 2.9441 0.4331 1671.25 1672.875 8354.8 1 726.6 57.1 1 T.PPVLDSDGSFFLYSK.L ORFP:YBL018C 2 2 26.3% 133 15512 4.9 U POP8 SGDID:S0000114, Chr II from 185960-186006,186082-186436, reverse complement * bethti5g-06.1986.1986.2 3.9784 0.4527 2564.11 2565.774 8077.9 2 646.4 40.5 1 K.LSITSFDQDVDDAHAIDQMTWR.Q * bethti5g-06.1780.1780.2 3.5178 0.3392 1615.78 1616.855 9525.5 1 1282.6 66.7 1 R.LLEVTDDDRLWLK.K ORFP:YJL177W 3 4 25.5% 184 20551 10.9 U RPL17B SGDID:S0003713, Chr X from 90783-91091,91409-91654 ORFP:YKL180W 3 4 25.5% 184 20549 10.9 U RPL17A SGDID:S0001663, Chr XI from 109271-109579,109886-110131 bethti5g-01.1679.1679.2 4.7121 0.4723 1644.62 1645.856 7394.8 1 1803.9 76.7 2 K.FVQGLLQNAAANAEAK.G bethti5g-06.1316.1316.2 3.9639 0.4068 1496.78 1497.737 7823.3 1 1404.6 75.0 1 K.LYVSHIQVNQAPK.Q bethti5g-06.1406.1406.2 3.4602 0.401 2072.36 2074.338 9267.7 1 894.3 52.9 1 R.INKYESSPSHIELVVTEK.E ORFP:YBL087C 2 8 25.5% 137 14473 10.3 U RPL23A SGDID:S0000183, Chr II from 59815-59856,60361-60732, reverse complement ORFP:YER117W 2 8 25.5% 137 14473 10.3 U RPL23B SGDID:S0000919, Chr V from 396765-396806,397278-397649 bethti5g-01.2222.2222.2 4.2866 0.5045 2016.52 2017.274 7429.0 1 1161.5 57.9 4 R.ISLGLPVGAIMNCADNSGAR.N bethti5g-01.2238.2238.2 4.2295 0.5268 1503.17 1504.843 5924.6 1 1875.4 85.7 4 R.LPAASLGDMVMATVK.K ORFP:YHR121W 3 5 25.1% 187 21314 9.4 U YHR121W SGDID:S0001163, Chr VIII from 352758-353321 * bethti5g-01.1688.1688.2 3.0881 0.3033 1932.41 1933.125 8169.3 1 706.2 53.1 1 R.LYSFNSSNNTLTIQTTK.K * bethti5g-01.2503.2503.2 3.5882 0.4803 1685.48 1686.905 6620.0 1 759.6 60.7 3 K.GVSAEGQFIFDQIFK.T * bethti5g-06.1340.1340.2 4.3484 0.5383 1694.33 1695.916 6022.7 1 1453.3 78.6 1 K.VLHEGSNQSITLIQR.I NRL_1MCOL 3 5 21.8% 216 22815 6.3 U owl|| Immunoglobulin g1 (igg1) (mcg) with a hinge deletion, chain L... * bethti5g-01.2424.2424.2 3.0125 0.3066 1925.99 1927.216 5970.5 1 828.5 59.4 1 E.VCLISDFYPGAVTVAWK.A * bethti5g-01.1844.1844.2 2.9108 0.3734 1743.74 1744.941 6688.8 1 650.1 57.1 3 K.YAASSYLSLTPEQWK.S * bethti5g-01.0240.0240.2 4.1054 0.5593 1711.95 1712.777 7027.9 1 1060.5 67.9 1 R.SYSCQVTHEGSTVEK.T ORFP:YGR027C 2 2 21.3% 108 12039 10.3 U RPS25A SGDID:S0003259, Chr VII from 534126-534452, reverse complement ORFP:YLR333C 2 2 21.3% 108 12009 10.3 U RPS25B SGDID:S0004325, Chr XII from 795573-795899, reverse complement bethti5g-01.0279.0279.1 1.8814 0.2326 729.29 729.855 4816.5 4 363.7 68.8 1 K.AAAALAGGK.K bethti5g-06.1265.1265.2 3.111 0.4154 1686.3 1686.865 7378.4 1 716.2 61.5 1 R.AQHAVILDQEKYDR.I ORFP:YCR031C 2 3 21.2% 137 14537 10.7 U RPS14A SGDID:S0000627, Chr III from 177492-177498,177806-178212, reverse complement ORFP:YJL191W 2 3 21.0% 138 14650 10.5 U RPS14B SGDID:S0003727, Chr X from 73786-73795,74204-74610 bethti5g-06.1881.1881.2 3.6285 0.464 2013.94 2015.23 8941.4 1 1161.0 55.9 1 R.IYASFNDTFVHVTDLSGK.E bethti5g-05.0570.0570.2 2.6633 0.473 1024.45 1025.153 6698.0 1 772.1 70.0 2 K.TPGPGGQAALR.A ORFP:YNL221C 15 32 20.7% 875 100395 9.8 U POP1 SGDID:S0005165, Chr XIV from 231067-233694, reverse complement * bethti5g-06.1292.1292.1 2.4353 0.216 1169.42 1170.372 2207.2 2 75.4 55.6 1 K.QLQLAMHNSK.A * bethti5g-02.0871.0871.2 2.5422 0.1207 844.91 845.032 4478.4 1 875.8 91.7 1 R.IFQALPR.K * bethti5g-06.0652.0652.2 2.5112 0.2001 838.25 838.985 6809.1 1 963.7 85.7 1 R.KAHGLNAK.Q * bethti5g-01.2070.2070.2 3.0122 0.3451 1494.97 1495.739 6305.5 1 784.3 68.2 2 R.WGYQMVWAPTQK.C * bethti5g-01.1559.1559.2 2.6051 0.1093 981.76 982.165 4573.7 5 553.0 68.8 1 R.YSLASVTLK.G * bethti5g-06.2433.2433.3 3.6437 0.3679 3733.79 3735.92 9041.6 1 510.3 20.2 1 K.TVNSDDILSLHENYPQDEINAVFNELCDPESR.T * bethti5g-01.0256.0256.2 2.9857 0.3035 1310.75 1311.394 5201.7 1 500.8 65.0 1 R.TQSYNNQNTLK.E * bethti5g-01.1131.1131.2 2.5785 0.2322 1171.61 1172.367 6170.9 1 527.2 60.0 1 K.LLTATPNSINK.T * bethti5g-01.2743.2743.3 4.2989 0.5141 2748.05 2750.036 9374.4 1 1017.7 33.3 1 K.QLYFPDDYPFTQLGYIENSFYK.K * bethti5g-01.2794.2794.2 3.5615 0.5171 2748.87 2750.036 7862.5 1 696.1 42.9 2 K.QLYFPDDYPFTQLGYIENSFYK.K * bethti5g-06.2242.2242.2 5.2841 0.46 1949.91 1948.098 6176.7 1 1634.8 75.0 9 K.LPAYSGEIGDFFSSDWR.F * bethti5g-06.1184.1184.2 3.7713 0.4087 1205.82 1206.347 6732.0 1 1303.3 90.0 1 K.KTGQFNAQGVR.D * bethti5g-01.0840.0840.2 3.0726 0.3062 1077.19 1078.173 9241.3 1 1179.4 83.3 1 K.TGQFNAQGVR.D * bethti5g-01.2323.2323.2 5.2189 0.5373 2092.45 2090.297 7375.0 1 1259.4 61.1 7 R.TPDSISVNSSSFSLTFFPR.C * bethti5g-01.1927.1927.2 3.6531 0.4504 1434.55 1435.636 5661.7 1 1374.5 86.4 2 R.CIIAVSCTLLER.G ORFP:YBR031W 4 6 19.6% 362 39092 10.6 U RPL4A SGDID:S0000235, Chr II from 300125-301213 ORFP:YDR012W 4 6 19.6% 362 39062 10.6 U RPL4B SGDID:S0002419, Chr IV from 471849-472937 bethti5g-06.2524.2524.2 3.4885 0.36 1820.17 1821.127 9264.9 1 1071.3 52.8 1 R.YATASAIAATAVASLVLAR.G bethti5g-06.1458.1458.2 3.3631 0.3871 1629.58 1630.885 7331.6 1 1037.2 64.3 1 R.RGPLVVYAEDNGIVK.A bethti5g-06.1504.1504.2 3.7037 0.4462 1846.32 1847.078 4527.2 1 496.0 53.1 2 K.VGYTLPSHIISTSDVTR.I bethti5g-06.1385.1385.2 4.8381 0.4521 2114.48 2113.379 7463.1 1 729.2 50.0 2 R.IINSSEIQSAIRPAGQATQK.R KERATIN02 7 13 18.0% 622 61987 5.2 U no description * bethti5g-06.1654.1654.2 4.2991 0.5881 2704.63 2706.761 7819.2 1 847.9 35.5 2 R.GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR.G * bethti5g-01.1978.1978.3 5.2574 0.5019 2705.36 2706.761 8124.3 1 1207.3 30.6 1 R.GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR.G * bethti5g-01.1670.1670.2 3.6826 0.5325 2022.35 2024.07 9848.4 1 1110.6 47.8 1 Y.SYGGGSGGGFSASSLGGGFGGGSR.G * bethti5g-06.2380.2380.2 3.3998 0.413 2170.06 2172.47 7685.3 1 1145.9 58.8 1 K.SDLEMQYETLQEELMALK.K * bethti5g-06.2008.2008.3 6.0675 0.4354 3263.9 3266.413 7655.9 1 1338.7 31.2 1 K.DIENQYETQITQIEHEVSSSGQEVQSSAK.E * bethti5g-06.1945.1945.2 4.7309 0.4555 1839.65 1839.056 10642.8 1 2220.8 70.0 3 R.HGVQELEIELQSQLSK.K * bethti5g-02.2057.2057.2 4.2274 0.4807 2095.31 2096.308 6879.6 1 814.5 56.2 4 R.QEIECQNQEYSLLLSIK.M KERATIN03 5 10 15.3% 593 59519 5.2 U no description * bethti5g-06.1488.1488.2 3.8057 0.5059 1707.49 1708.784 7821.4 1 761.4 50.0 1 K.GSLGGGFSSGGFSGGSFSR.G * bethti5g-06.2129.2129.3 5.7012 0.3474 2367.42 2368.652 10067.8 1 2210.5 43.8 1 K.NQILNLTTDNANILLQIDNAR.L * bethti5g-01.2912.2912.2 4.0998 0.5064 2097.05 2097.385 6620.3 1 1270.5 64.7 2 K.ADLEMQIESLTEELAYLK.K * bethti5g-06.2057.2057.2 3.3801 0.3111 1798.09 1798.09 9431.1 1 879.3 56.7 3 R.NVQALEIELQSQLALK.Q * bethti5g-02.1467.1467.2 4.7749 0.3791 2082.98 2084.21 10581.6 1 1528.0 62.5 3 R.AETECQNTEYQQLLDIK.I ORFP:YDR478W 3 4 14.6% 198 22541 9.6 U SNM1 SGDID:S0002886, Chr IV from 1414562-1415158 * bethti5g-01.1318.1318.1 1.9152 0.1564 914.23 915.077 5991.2 1 536.3 71.4 2 R.ALSGLYYK.N * bethti5g-01.1802.1802.2 2.6209 0.114 1103.01 1103.304 6751.6 1 906.2 83.3 1 K.LNSLTNLLSK.R * bethti5g-01.1932.1932.2 3.0957 0.2013 1215.22 1216.392 6266.3 1 762.7 70.0 1 K.SSSLSLESFMK.S ORFP:YGL123W 3 7 13.0% 254 27450 10.4 U RPS2 SGDID:S0003091, Chr VII from 277618-278382 * bethti5g-06.2600.2600.2 3.7304 0.3966 1740.65 1741.081 7385.6 1 1031.0 60.7 4 K.ITTIEEIFLHSLPVK.E * bethti5g-06.1596.1596.2 3.5119 0.367 1963.59 1964.226 10565.5 1 924.1 50.0 1 K.KLLQLAGVEDVYTQSNGK.T * bethti5g-02.1603.1603.2 2.9191 0.4034 1834.73 1836.052 8269.4 1 1132.1 59.4 2 K.LLQLAGVEDVYTQSNGK.T ORFP:YBR257W 2 3 12.5% 279 32881 9.2 U POP4 SGDID:S0000461, Chr II from 728843-729682 * bethti5g-06.2236.2236.2 3.8468 0.495 1671.06 1671.977 8403.3 1 1412.2 67.9 2 K.TLIGLQGIVIWDSQK.F * bethti5g-06.2024.2024.2 3.8968 0.3476 2253.7 2254.458 6998.5 1 827.7 52.6 1 K.KGTVFQFEIPISDDDDSALR.Y ORFP:YGR192C 2 2 12.0% 332 35747 7.0 U TDH3 SGDID:S0003424, Chr VII from 882807-883805, reverse complement * bethti5g-06.2132.2132.2 4.3585 0.4348 2403.45 2404.638 5468.4 1 882.0 52.3 1 R.DPANLPWGSSNVDIAIDSTGVFK.E bethti5g-01.1348.1348.2 3.6713 0.4043 1820.0 1821.013 8521.2 1 1136.6 59.4 1 K.IVSNASCTTNCLAPLAK.V ORFP:YGR214W 2 3 10.7% 252 28024 4.7 U RPS0A SGDID:S0003446, Chr VII from 920570-920659,921115-921783 ORFP:YLR048W 2 3 10.7% 252 27962 4.7 U RPS0B SGDID:S0004038, Chr XII from 242233-242322,242682-243350 bethti5g-06.1256.1256.1 2.7158 0.2159 1269.29 1270.434 4159.0 1 236.4 58.3 1 K.FAAHTGATPIAGR.F bethti5g-01.2567.2567.2 3.0844 0.3171 1819.19 1818.1 5840.3 1 651.5 61.5 2 R.TQPWSIMPDLYFYR.D ORFP:YNL085W 4 4 7.3% 830 94494 5.6 U MKT1 SGDID:S0005029, Chr XIV from 467128-469620 * bethti5g-01.2168.2168.2 3.3546 0.3195 1127.99 1128.27 8665.4 1 1579.5 87.5 1 K.SLESFLFER.G * bethti5g-06.2109.2109.2 3.0819 0.3631 1979.41 1980.176 9166.0 1 1246.5 59.4 1 K.VELFVQEIVVSEEDSEK.N * bethti5g-06.1437.1437.2 3.0919 0.1612 1552.33 1553.802 9945.0 2 1166.3 62.5 1 K.NKEINLLTQPINR.Y * bethti5g-01.3126.3126.2 5.0819 0.5216 2482.28 2483.737 6610.1 1 880.8 50.0 1 K.ENLNELFEAVLISSLTSGEFNR.L ORFP:YDL229W 2 2 5.2% 613 66602 5.4 U SSB1 SGDID:S0002388, Chr IV from 44066-45907 ORFP:YNL209W 2 2 5.2% 613 66595 5.5 U SSB2 SGDID:S0005153, Chr XIV from 252058-253899 bethti5g-01.2178.2178.2 3.477 0.2904 1553.08 1552.826 8334.8 1 1575.4 76.9 1 K.TFSPQEISAMVLTK.M bethti5g-01.1947.1947.2 3.828 0.454 1729.49 1731.002 6497.7 1 1196.4 64.7 1 R.IINEPTAAAIAYGLGAGK.S ORFP:YGR178C 2 3 5.1% 722 78782 6.9 U PBP1 SGDID:S0003410, Chr VII from 851042-853210, reverse complement * bethti5g-04.1478.1478.2 3.0681 0.3749 1925.54 1926.003 7292.5 1 1059.8 56.2 1 K.ALEDDSASWDQFAVNEK.K * bethti5g-05.1922.1922.2 3.4731 0.4666 2180.21 2182.303 7625.1 1 1411.2 57.9 2 R.GIIIDDSGLDEEDLYSGVDR.R Proteins Peptide IDs Copies Unfiltered 4025 4926 11915 Redundant 29 92 176 Nonredundant 22 92 176 Classification Nonredundant Proteins Redundant Proteins Unclassified 0 0