| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.686462418429] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial matrix | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| mitochondrial lumen | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transferase activity, transferring nitrogenous groups | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| transaminase activity | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| branched-chain-amino-acid transaminase activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |