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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.686910366686]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell division site 1.7735E-5 2 27 2 6292
cell division site part 1.7735E-5 2 27 2 6292
cell cortex part 2.304E-4 2 96 2 6292
cell cortex 2.974E-4 2 109 2 6292
cellular bud neck 4.1715E-4 2 129 2 6292
cellular bud 6.9196E-4 2 166 2 6292
site of polarized growth 7.0879E-4 2 168 2 6292
cytoskeletal part 1.0156E-3 2 201 2 6292
cytoskeleton 1.1732E-3 2 216 2 6292
mating projection base 2.224E-3 2 7 1 6292
cellular bud neck septin structure 2.859E-3 2 9 1 6292
cellular bud neck septin ring 2.859E-3 2 9 1 6292
cleavage apparatus septin structure 2.859E-3 2 9 1 6292
spore wall 3.1764E-3 2 10 1 6292
ascospore wall 3.1764E-3 2 10 1 6292
septin ring 4.7627E-3 2 15 1 6292
septin cytoskeleton 4.7627E-3 2 15 1 6292
cellular bud neck contractile ring 5.7138E-3 2 18 1 6292
actomyosin contractile ring 5.7138E-3 2 18 1 6292
contractile ring 5.7138E-3 2 18 1 6292
prospore membrane 6.0308E-3 2 19 1 6292
intracellular immature spore 6.0308E-3 2 19 1 6292
ascospore-type prospore 6.0308E-3 2 19 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

axial cellular bud site selection 2.0514E-5 2 29 2 6292
cellular bud site selection 1.3647E-4 2 74 2 6292
cytokinesis, site selection 1.3647E-4 2 74 2 6292
cell cycle cytokinesis 1.5966E-4 2 80 2 6292
establishment of cell polarity 1.7614E-4 2 84 2 6292
establishment or maintenance of cell polarity 1.8038E-4 2 85 2 6292
cell budding 2.0236E-4 2 90 2 6292
asexual reproduction 2.0236E-4 2 90 2 6292
cytokinetic process 2.1151E-4 2 92 2 6292
cytokinesis 3.1407E-4 2 112 2 6292
cell morphogenesis 3.9158E-4 2 125 2 6292
cellular component morphogenesis 4.7763E-4 2 138 2 6292
cell division 5.275E-4 2 145 2 6292
reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
anatomical structure development 1.7012E-3 2 260 2 6292
cellular developmental process 1.9175E-3 2 276 2 6292
reproduction 2.7096E-3 2 328 2 6292
developmental process 2.7595E-3 2 331 2 6292
cell cycle process 6.0534E-3 2 490 2 6292
cell cycle 6.95E-3 2 525 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphatidylinositol binding 3.1764E-3 2 10 1 6292
guanyl ribonucleotide binding 5.0798E-3 2 16 1 6292
GTP binding 5.0798E-3 2 16 1 6292
guanyl nucleotide binding 5.7138E-3 2 18 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle