From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.691071390403] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
NUM1 |
|
|
|
VRP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cellular component morphogenesis | 4.7763E-4 | 2 | 138 | 2 | 6292 |
cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
anatomical structure morphogenesis | 1.6621E-3 | 2 | 257 | 2 | 6292 |
anatomical structure development | 1.7012E-3 | 2 | 260 | 2 | 6292 |
mitochondrial fission | 1.9064E-3 | 2 | 6 | 1 | 6292 |
cellular developmental process | 1.9175E-3 | 2 | 276 | 2 | 6292 |
developmental process | 2.7595E-3 | 2 | 331 | 2 | 6292 |
cell part morphogenesis | 3.811E-3 | 2 | 12 | 1 | 6292 |
mitochondrion morphogenesis | 3.811E-3 | 2 | 12 | 1 | 6292 |
microtubule-based movement | 5.0798E-3 | 2 | 16 | 1 | 6292 |
microtubule-based transport | 5.0798E-3 | 2 | 16 | 1 | 6292 |
nuclear migration along microtubule | 5.0798E-3 | 2 | 16 | 1 | 6292 |
cytoskeleton-dependent intracellular transport | 5.7138E-3 | 2 | 18 | 1 | 6292 |
nuclear migration | 6.3477E-3 | 2 | 20 | 1 | 6292 |
nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
establishment of nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
tubulin binding | 6.3477E-3 | 2 | 20 | 1 | 6292 |
actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |