| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.718679911192] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ARC40 |
|
|
|
| JNM1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| dynactin complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| Arp2/3 protein complex | 2.224E-3 | 2 | 7 | 1 | 6292 |
| microtubule associated complex | 5.7138E-3 | 2 | 18 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| organelle localization | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| actin nucleation | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| establishment of nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| nuclear migration | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of cytoskeleton | 6.9626E-5 | 2 | 53 | 2 | 6292 |
| structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |