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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.729648019433]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alditol biosynthetic process 3.0316E-7 2 4 2 6292
glycerol biosynthetic process 3.0316E-7 2 4 2 6292
polyol biosynthetic process 3.0316E-7 2 4 2 6292
alditol metabolic process 2.2737E-6 2 10 2 6292
glycerol metabolic process 2.2737E-6 2 10 2 6292
polyol metabolic process 7.7306E-6 2 18 2 6292
fermentation 9.6001E-6 2 20 2 6292
alcohol biosynthetic process 5.4619E-5 2 47 2 6292
response to osmotic stress 1.4784E-4 2 77 2 6292
cellular carbohydrate biosynthetic process 1.5173E-4 2 78 2 6292
carbohydrate biosynthetic process 2.0691E-4 2 91 2 6292
response to abiotic stimulus 3.4287E-4 2 117 2 6292
energy derivation by oxidation of organic compounds 5.5711E-4 2 149 2 6292
generation of precursor metabolites and energy 9.5571E-4 2 195 2 6292
alcohol metabolic process 1.2172E-3 2 220 2 6292
cellular carbohydrate metabolic process 1.7276E-3 2 262 2 6292
carbohydrate metabolic process 1.9877E-3 2 281 2 6292
small molecule biosynthetic process 2.42E-3 2 310 2 6292
response to stress 6.2277E-3 2 497 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycerol-1-phosphatase activity 1.5158E-7 2 3 2 6292
phosphatase activity 1.8902E-4 2 87 2 6292
phosphoric ester hydrolase activity 2.6026E-4 2 102 2 6292
hydrolase activity, acting on ester bonds 2.929E-3 2 341 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle