| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.738245561664] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CYB5 |
|
|
|
| NCP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microsome | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| vesicular fraction | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| membrane fraction | 2.0691E-4 | 2 | 91 | 2 | 6292 |
| insoluble fraction | 2.0691E-4 | 2 | 91 | 2 | 6292 |
| cell fraction | 4.1715E-4 | 2 | 129 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| electron transport | 1.819E-6 | 2 | 9 | 2 | 6292 |
| steroid biosynthetic process | 2.5061E-5 | 2 | 32 | 2 | 6292 |
| sterol biosynthetic process | 2.5061E-5 | 2 | 32 | 2 | 6292 |
| sterol metabolic process | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| steroid metabolic process | 4.5626E-5 | 2 | 43 | 2 | 6292 |
| obsolete_biological_process | 8.9432E-5 | 2 | 60 | 2 | 6292 |
| lipid biosynthetic process | 4.2367E-4 | 2 | 130 | 2 | 6292 |
| alcohol metabolic process | 1.2172E-3 | 2 | 220 | 2 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| phytosteroid metabolic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| phytosteroid biosynthetic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ergosterol biosynthetic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ergosterol metabolic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| electron carrier activity | 1.4147E-6 | 2 | 8 | 2 | 6292 |