From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.07] [SVM Score: 0.811598153649] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
MRS2 |
|
|
|
PET54 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mitochondrial inner membrane | 7.6048E-4 | 2 | 174 | 2 | 6292 |
organelle inner membrane | 8.5997E-4 | 2 | 185 | 2 | 6292 |
mitochondrial membrane | 1.7808E-3 | 2 | 266 | 2 | 6292 |
mitochondrial envelope | 2.4514E-3 | 2 | 312 | 2 | 6292 |
mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
RNA splicing, via transesterification reactions | 2.8654E-4 | 2 | 107 | 2 | 6292 |
Group II intron splicing | 3.1786E-4 | 2 | 1 | 1 | 6292 |
RNA splicing | 4.3685E-4 | 2 | 132 | 2 | 6292 |
mitochondrial magnesium ion transport | 6.3568E-4 | 2 | 2 | 1 | 6292 |
magnesium ion transport | 1.5888E-3 | 2 | 5 | 1 | 6292 |
RNA splicing, via transesterification reactions with guanosine as nucleophile | 2.224E-3 | 2 | 7 | 1 | 6292 |
Group I intron splicing | 2.224E-3 | 2 | 7 | 1 | 6292 |
divalent metal ion transport | 3.1764E-3 | 2 | 10 | 1 | 6292 |
RNA processing | 3.6384E-3 | 2 | 380 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
magnesium ion transmembrane transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
translation regulator activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |