From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.835975160739] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
septin ring | 5.3053E-6 | 2 | 15 | 2 | 6292 |
septin cytoskeleton | 5.3053E-6 | 2 | 15 | 2 | 6292 |
cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
mating projection base | 2.224E-3 | 2 | 7 | 1 | 6292 |
cellular bud neck septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
cellular bud neck septin ring | 2.859E-3 | 2 | 9 | 1 | 6292 |
cleavage apparatus septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
spore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
ascospore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
prospore membrane | 6.0308E-3 | 2 | 19 | 1 | 6292 |
intracellular immature spore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
ascospore-type prospore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytokinetic process | 2.1151E-4 | 2 | 92 | 2 | 6292 |
cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
asymmetric protein localization | 3.1786E-4 | 2 | 1 | 1 | 6292 |
cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
barrier septum formation | 9.5344E-4 | 2 | 3 | 1 | 6292 |
aminoglycan biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
chitin biosynthetic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
aminoglycan metabolic process | 4.1283E-3 | 2 | 13 | 1 | 6292 |
chitin metabolic process | 4.1283E-3 | 2 | 13 | 1 | 6292 |
axial cellular bud site selection | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
phosphatidylinositol binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |