YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.868178278066]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

arginine metabolic process 6.0632E-6 2 16 2 6292
glutamine family amino acid metabolic process 4.5626E-5 2 43 2 6292
negative regulation of exocytosis 3.1786E-4 2 1 1 6292
negative regulation of secretion 3.1786E-4 2 1 1 6292
negative regulation of calcium ion-dependent exocytosis 3.1786E-4 2 1 1 6292
calcium ion-dependent exocytosis 3.1786E-4 2 1 1 6292
regulation of calcium ion-dependent exocytosis 3.1786E-4 2 1 1 6292
negative regulation of transport 9.5344E-4 2 3 1 6292
regulation of secretion 9.5344E-4 2 3 1 6292
regulation of exocytosis 9.5344E-4 2 3 1 6292
cellular amino acid metabolic process 9.9543E-4 2 199 2 6292
cellular amine metabolic process 1.2395E-3 2 222 2 6292
amine metabolic process 1.4856E-3 2 243 2 6292
cellular amino acid and derivative metabolic process 1.4856E-3 2 243 2 6292
regulation of cellular localization 1.5888E-3 2 5 1 6292
regulation of vesicle-mediated transport 1.9064E-3 2 6 1 6292
organic acid metabolic process 2.793E-3 2 333 2 6292
oxoacid metabolic process 2.793E-3 2 333 2 6292
carboxylic acid metabolic process 2.793E-3 2 333 2 6292
cellular ketone metabolic process 3.0157E-3 2 346 2 6292
regulation of transport 3.4937E-3 2 11 1 6292
regulation of localization 3.4937E-3 2 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription regulator activity 2.8947E-3 2 339 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle