| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.980271360094] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| MET10 |
|
|
|
| MET5 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sulfite reductase complex (NADPH) | 5.0527E-8 | 2 | 2 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sulfate assimilation | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| sulfur metabolic process | 2.0236E-4 | 2 | 90 | 2 | 6292 |
| response to drug | 4.1068E-4 | 2 | 128 | 2 | 6292 |
| response to chemical stimulus | 3.6769E-3 | 2 | 382 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sulfite reductase (NADPH) activity | 5.0527E-8 | 2 | 2 | 2 | 6292 |
| oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| oxidoreductase activity, acting on sulfur group of donors | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| oxidoreductase activity, acting on NADH or NADPH | 1.0611E-5 | 2 | 21 | 2 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |