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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.999408041694]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular bud neck septin structure 1.819E-6 2 9 2 6292
cellular bud neck septin ring 1.819E-6 2 9 2 6292
cleavage apparatus septin structure 1.819E-6 2 9 2 6292
spore wall 2.2737E-6 2 10 2 6292
ascospore wall 2.2737E-6 2 10 2 6292
septin ring 5.3053E-6 2 15 2 6292
septin cytoskeleton 5.3053E-6 2 15 2 6292
prospore membrane 8.6401E-6 2 19 2 6292
intracellular immature spore 8.6401E-6 2 19 2 6292
ascospore-type prospore 8.6401E-6 2 19 2 6292
cell division site 1.7735E-5 2 27 2 6292
cell division site part 1.7735E-5 2 27 2 6292
cell cortex part 2.304E-4 2 96 2 6292
fungal-type cell wall 2.7588E-4 2 105 2 6292
cell wall 2.8118E-4 2 106 2 6292
external encapsulating structure 2.8118E-4 2 106 2 6292
cell cortex 2.974E-4 2 109 2 6292
cellular bud neck 4.1715E-4 2 129 2 6292
cellular bud 6.9196E-4 2 166 2 6292
site of polarized growth 7.0879E-4 2 168 2 6292
cytoskeletal part 1.0156E-3 2 201 2 6292
cytoskeleton 1.1732E-3 2 216 2 6292
mating projection base 2.224E-3 2 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell morphogenesis 3.9158E-4 2 125 2 6292
cellular component morphogenesis 4.7763E-4 2 138 2 6292
external encapsulating structure organization 7.5174E-4 2 173 2 6292
cell wall organization 7.5174E-4 2 173 2 6292
cellular cell wall organization 7.5174E-4 2 173 2 6292
cellular cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
cell wall organization or biogenesis 1.0877E-3 2 208 2 6292
reproduction of a single-celled organism 1.1841E-3 2 217 2 6292
anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
anatomical structure development 1.7012E-3 2 260 2 6292
cellular developmental process 1.9175E-3 2 276 2 6292
reproduction 2.7096E-3 2 328 2 6292
developmental process 2.7595E-3 2 331 2 6292
cell morphogenesis involved in conjugation with cellular fusion 6.9813E-3 2 22 1 6292
cell morphogenesis involved in conjugation 7.6148E-3 2 24 1 6292
axial cellular bud site selection 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of cytoskeleton 6.9626E-5 2 53 2 6292
structural molecule activity 2.8947E-3 2 339 2 6292
phosphatidylinositol binding 3.1764E-3 2 10 1 6292

YRC Informatics Platform - Version 3.0
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