From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.088] [SVM Score: 0.37287832305] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
eukaryotic translation elongation factor 1 complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
processing of 27S pre-rRNA | 5.0798E-3 | 2 | 16 | 1 | 6292 |
tRNA export from nucleus | 8.8811E-3 | 2 | 28 | 1 | 6292 |
tRNA transport | 8.8811E-3 | 2 | 28 | 1 | 6292 |
translational elongation | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
GTPase activity | 9.2464E-5 | 2 | 61 | 2 | 6292 |
GDP binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
nucleoside-triphosphatase activity | 2.7262E-3 | 2 | 329 | 2 | 6292 |
hydrolase activity, acting on acid anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
pyrophosphatase activity | 3.1391E-3 | 2 | 353 | 2 | 6292 |
translation elongation factor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
GTP binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
guanyl ribonucleotide binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
guanyl nucleotide binding | 5.7138E-3 | 2 | 18 | 1 | 6292 |
actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
purine nucleoside binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |