From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.057] [SVM Score: 0.39869176359] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
GLK1 |
|
|
|
SYP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mating projection base | 2.224E-3 | 2 | 7 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
glucose import | 1.2712E-3 | 2 | 4 | 1 | 6292 |
mannose metabolic process | 1.9064E-3 | 2 | 6 | 1 | 6292 |
glucose transport | 1.9064E-3 | 2 | 6 | 1 | 6292 |
glycolysis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
hexose transport | 8.248E-3 | 2 | 26 | 1 | 6292 |
monosaccharide transport | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
glucokinase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
hexokinase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
carbohydrate kinase activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |