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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.04] [SVM Score: 0.400098095184]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell wall polysaccharide biosynthetic process 2.859E-3 2 9 1 6292
cell wall chitin biosynthetic process 2.859E-3 2 9 1 6292
cell wall chitin metabolic process 3.1764E-3 2 10 1 6292
aminoglycan biosynthetic process 3.4937E-3 2 11 1 6292
chitin biosynthetic process 3.4937E-3 2 11 1 6292
cell wall polysaccharide metabolic process 3.811E-3 2 12 1 6292
aminoglycan metabolic process 4.1283E-3 2 13 1 6292
chitin metabolic process 4.1283E-3 2 13 1 6292
cell wall macromolecule biosynthetic process 6.9813E-3 2 22 1 6292
cellular component macromolecule biosynthetic process 6.9813E-3 2 22 1 6292
cellular cell wall macromolecule metabolic process 7.2981E-3 2 23 1 6292
cell wall macromolecule metabolic process 7.6148E-3 2 24 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle