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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.83889771532]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

fumarate metabolic process 3.1786E-4 2 1 1 6292
coenzyme metabolic process 3.6076E-4 2 120 2 6292
energy derivation by oxidation of organic compounds 5.5711E-4 2 149 2 6292
cofactor metabolic process 5.9526E-4 2 154 2 6292
generation of precursor metabolites and energy 9.5571E-4 2 195 2 6292
glucose catabolic process to ethanol 2.224E-3 2 7 1 6292
glycolytic fermentation 2.5415E-3 2 8 1 6292
monohydric alcohol metabolic process 3.4937E-3 2 11 1 6292
ethanol metabolic process 3.4937E-3 2 11 1 6292
NADH oxidation 3.811E-3 2 12 1 6292
chronological cell aging 4.4455E-3 2 14 1 6292
tricarboxylic acid cycle 4.7627E-3 2 15 1 6292
acetyl-CoA catabolic process 4.7627E-3 2 15 1 6292
NADH metabolic process 4.7627E-3 2 15 1 6292
catabolic process 6.2027E-3 2 496 2 6292
acetyl-CoA metabolic process 6.3477E-3 2 20 1 6292
fermentation 6.3477E-3 2 20 1 6292
coenzyme catabolic process 6.3477E-3 2 20 1 6292
cofactor catabolic process 6.9813E-3 2 22 1 6292
NAD metabolic process 7.9314E-3 2 25 1 6292
dicarboxylic acid metabolic process 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

fumarate hydratase activity 3.1786E-4 2 1 1 6292
NADH dehydrogenase activity 9.5344E-4 2 3 1 6292
oxidoreductase activity, acting on NADH or NADPH 6.6645E-3 2 21 1 6292
hydro-lyase activity 8.5646E-3 2 27 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle