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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Vps21. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
intracellular protein transport 4.7773E-3 3 255 2 6292
protein transport 5.3092E-3 3 269 2 6292
establishment of protein localization 5.3875E-3 3 271 2 6292
cellular protein localization 5.5058E-3 3 274 2 6292
cellular macromolecule localization 5.9093E-3 3 284 2 6292
protein localization 6.714E-3 3 303 2 6292
vesicle-mediated transport 8.4226E-3 3 340 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

small GTPase regulator activity 2.5779E-4 3 59 2 6292
Rab GDP-dissociation inhibitor activity 4.768E-4 3 1 1 6292
GTPase regulator activity 5.2382E-4 3 84 2 6292
nucleoside-triphosphatase regulator activity 6.7013E-4 3 95 2 6292
GDP-dissociation inhibitor activity 9.5344E-4 3 2 1 6292
Rab GTPase binding 2.3825E-3 3 5 1 6292
enzyme regulator activity 3.1616E-3 3 207 2 6292
GTPase binding 4.7611E-3 3 10 1 6292
small GTPase binding 4.7611E-3 3 10 1 6292
Ras GTPase binding 4.7611E-3 3 10 1 6292
enzyme binding 6.6614E-3 3 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle