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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Srp1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear cap binding complex 1.4299E-3 3 3 1 6292
RNA cap binding complex 2.8585E-3 3 6 1 6292
commitment complex 5.7116E-3 3 12 1 6292
U2-type spliceosomal complex 5.7116E-3 3 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear transport 1.2538E-3 3 130 2 6292
nucleocytoplasmic transport 1.2538E-3 3 130 2 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 5.2364E-3 3 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transmembrane transporter activity 4.2857E-3 3 9 1 6292
macromolecule transmembrane transporter activity 4.2857E-3 3 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle