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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ptc5. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

purine ribonucleoside salvage 2.224E-3 2 7 1 6292
nucleoside biosynthetic process 2.224E-3 2 7 1 6292
purine ribonucleoside biosynthetic process 2.224E-3 2 7 1 6292
purine nucleoside biosynthetic process 2.224E-3 2 7 1 6292
ribonucleoside biosynthetic process 2.224E-3 2 7 1 6292
nucleoside salvage 2.224E-3 2 7 1 6292
purine salvage 3.1764E-3 2 10 1 6292
indolalkylamine biosynthetic process 3.811E-3 2 12 1 6292
tryptophan metabolic process 3.811E-3 2 12 1 6292
indole and derivative metabolic process 3.811E-3 2 12 1 6292
indole derivative metabolic process 3.811E-3 2 12 1 6292
indole derivative biosynthetic process 3.811E-3 2 12 1 6292
tryptophan biosynthetic process 3.811E-3 2 12 1 6292
indolalkylamine metabolic process 3.811E-3 2 12 1 6292
'de novo' pyrimidine base biosynthetic process 4.1283E-3 2 13 1 6292
purine ribonucleoside metabolic process 4.7627E-3 2 15 1 6292
histidine biosynthetic process 5.0798E-3 2 16 1 6292
purine nucleoside metabolic process 5.0798E-3 2 16 1 6292
histidine metabolic process 5.0798E-3 2 16 1 6292
pyrimidine base biosynthetic process 5.0798E-3 2 16 1 6292
histidine family amino acid metabolic process 5.0798E-3 2 16 1 6292
histidine family amino acid biosynthetic process 5.0798E-3 2 16 1 6292
'de novo' IMP biosynthetic process 5.0798E-3 2 16 1 6292
IMP biosynthetic process 5.3968E-3 2 17 1 6292
IMP metabolic process 5.3968E-3 2 17 1 6292
pyrimidine base metabolic process 5.7138E-3 2 18 1 6292
aromatic amino acid family biosynthetic process 5.7138E-3 2 18 1 6292
chorismate metabolic process 5.7138E-3 2 18 1 6292
purine ribonucleoside monophosphate biosynthetic process 6.0308E-3 2 19 1 6292
ribonucleoside metabolic process 6.0308E-3 2 19 1 6292
ribonucleoside monophosphate biosynthetic process 6.3477E-3 2 20 1 6292
purine nucleoside monophosphate biosynthetic process 6.3477E-3 2 20 1 6292
cellular biogenic amine biosynthetic process 6.3477E-3 2 20 1 6292
cellular metabolic compound salvage 6.9813E-3 2 22 1 6292
nucleobase biosynthetic process 7.2981E-3 2 23 1 6292
purine ribonucleoside monophosphate metabolic process 7.6148E-3 2 24 1 6292
aromatic amino acid family metabolic process 7.6148E-3 2 24 1 6292
ribonucleoside monophosphate metabolic process 7.9314E-3 2 25 1 6292
purine nucleoside monophosphate metabolic process 7.9314E-3 2 25 1 6292
nucleoside metabolic process 8.248E-3 2 26 1 6292
nucleoside monophosphate biosynthetic process 8.5646E-3 2 27 1 6292
cellular amino acid derivative biosynthetic process 8.8811E-3 2 28 1 6292
dicarboxylic acid metabolic process 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

[pyruvate dehydrogenase (lipoamide)] phosphatase activity 3.1786E-4 2 1 1 6292
ribose phosphate diphosphokinase activity 1.9064E-3 2 6 1 6292
diphosphotransferase activity 2.859E-3 2 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle