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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Lys1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

integral to mitochondrial outer membrane 8.2408E-3 4 13 1 6292
intrinsic to mitochondrial outer membrane 8.2408E-3 4 13 1 6292
integral to mitochondrial membrane 8.8726E-3 4 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

coenzyme metabolic process 2.1108E-3 4 120 2 6292
cofactor metabolic process 3.4575E-3 4 154 2 6292
folic acid and derivative biosynthetic process 3.8098E-3 4 6 1 6292
lysine biosynthetic process via aminoadipic acid 5.0773E-3 4 8 1 6292
folic acid and derivative metabolic process 5.7106E-3 4 9 1 6292
lysine biosynthetic process 5.7106E-3 4 9 1 6292
lysine metabolic process 5.7106E-3 4 9 1 6292
small molecule metabolic process 6.3905E-3 4 760 3 6292
pentose-phosphate shunt 7.6087E-3 4 12 1 6292
NADPH regeneration 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

saccharopine dehydrogenase (NAD+, L-lysine-forming) activity 6.3573E-4 4 1 1 6292
GTP cyclohydrolase activity 6.3573E-4 4 1 1 6292
GTP cyclohydrolase I activity 6.3573E-4 4 1 1 6292
saccharopine dehydrogenase activity 1.2712E-3 4 2 1 6292
transaldolase activity 1.2712E-3 4 2 1 6292
anion channel activity 1.9063E-3 4 3 1 6292
voltage-gated anion channel activity 1.9063E-3 4 3 1 6292
transferase activity, transferring aldehyde or ketonic groups 4.4437E-3 4 7 1 6292
voltage-gated channel activity 5.0773E-3 4 8 1 6292
voltage-gated ion channel activity 5.0773E-3 4 8 1 6292
gated channel activity 5.7106E-3 4 9 1 6292
ion channel activity 6.3436E-3 4 10 1 6292
cyclohydrolase activity 6.3436E-3 4 10 1 6292
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 7.6087E-3 4 12 1 6292
passive transmembrane transporter activity 8.2408E-3 4 13 1 6292
channel activity 8.2408E-3 4 13 1 6292
substrate-specific channel activity 8.2408E-3 4 13 1 6292
oxidoreductase activity, acting on the CH-NH group of donors 8.8726E-3 4 14 1 6292

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