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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ypt1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

soluble fraction 5.1567E-4 5 46 2 6292
membrane fraction 2.0111E-3 5 91 2 6292
insoluble fraction 2.0111E-3 5 91 2 6292
cell fraction 4.0056E-3 5 129 2 6292
actin cap 9.5026E-3 5 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle-mediated transport 1.4416E-3 5 340 3 6292
membrane addition at site of cytokinesis 1.5888E-3 5 2 1 6292
transport 2.7399E-3 5 997 4 6292
establishment of localization 2.8585E-3 5 1008 4 6292
ascospore-type prospore formation 3.1756E-3 5 4 1 6292
localization 3.47E-3 5 1060 4 6292
intracellular transport 5.9002E-3 5 553 3 6292
Golgi vesicle transport 6.7211E-3 5 168 2 6292
establishment of localization in cell 7.4143E-3 5 599 3 6292
cellular localization 9.0715E-3 5 643 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase regulator activity 2.2521E-5 5 84 3 6292
nucleoside-triphosphatase regulator activity 3.2628E-5 5 95 3 6292
enzyme regulator activity 3.3424E-4 5 207 3 6292
Rab GDP-dissociation inhibitor activity 7.9466E-4 5 1 1 6292
small GTPase regulator activity 8.4895E-4 5 59 2 6292
GTPase activity 9.0741E-4 5 61 2 6292
GDP-dissociation inhibitor activity 1.5888E-3 5 2 1 6292
Rab GTPase binding 3.9682E-3 5 5 1 6292
zinc ion binding 6.3431E-3 5 8 1 6292
GTPase binding 7.9239E-3 5 10 1 6292
small GTPase binding 7.9239E-3 5 10 1 6292
Ras GTPase binding 7.9239E-3 5 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle