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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription factor TFIID complex 4.7627E-3 2 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

tetrapyrrole biosynthetic process 4.1283E-3 2 13 1 6292
heme biosynthetic process 4.1283E-3 2 13 1 6292
porphyrin biosynthetic process 4.1283E-3 2 13 1 6292
regulation of transcription involved in G1 phase of mitotic cell cycle 4.4455E-3 2 14 1 6292
tetrapyrrole metabolic process 4.7627E-3 2 15 1 6292
porphyrin metabolic process 4.7627E-3 2 15 1 6292
heme metabolic process 4.7627E-3 2 15 1 6292
pigment biosynthetic process 6.3477E-3 2 20 1 6292
pigment metabolic process 6.9813E-3 2 22 1 6292
G1 phase of mitotic cell cycle 8.5646E-3 2 27 1 6292
G1 phase 8.5646E-3 2 27 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

coproporphyrinogen oxidase activity 3.1786E-4 2 1 1 6292
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 9.5344E-4 2 3 1 6292
oxidoreductase activity, acting on the CH-CH group of donors 7.6148E-3 2 24 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle