YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

valyl-tRNA aminoacylation 4.768E-4 3 1 1 6292
tetrapyrrole biosynthetic process 6.1865E-3 3 13 1 6292
heme biosynthetic process 6.1865E-3 3 13 1 6292
porphyrin biosynthetic process 6.1865E-3 3 13 1 6292
tetrapyrrole metabolic process 7.136E-3 3 15 1 6292
porphyrin metabolic process 7.136E-3 3 15 1 6292
heme metabolic process 7.136E-3 3 15 1 6292
pigment biosynthetic process 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

valine-tRNA ligase activity 4.768E-4 3 1 1 6292
coproporphyrinogen oxidase activity 4.768E-4 3 1 1 6292
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.4299E-3 3 3 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle