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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endoplasmic reticulum 6.3135E-7 5 364 5 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde vesicle-mediated transport, Golgi to ER 1.1425E-9 5 26 4 6292
Golgi vesicle transport 2.4026E-6 5 168 4 6292
vesicle-mediated transport 4.0131E-5 5 340 4 6292
intracellular transport 2.7477E-4 5 553 4 6292
establishment of localization in cell 3.7618E-4 5 599 4 6292
cellular localization 4.9681E-4 5 643 4 6292
transport 2.7399E-3 5 997 4 6292
establishment of localization 2.8585E-3 5 1008 4 6292
localization 3.47E-3 5 1060 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SNAP receptor activity 2.3825E-3 5 3 1 6292

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