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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GMP metabolic process 1.9063E-3 4 3 1 6292
nucleobase, nucleoside and nucleotide metabolic process 3.5916E-3 4 157 2 6292
heterocycle metabolic process 4.2502E-3 4 171 2 6292
'de novo' pyrimidine base biosynthetic process 8.2408E-3 4 13 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

dihydroorotate dehydrogenase activity 6.3573E-4 4 1 1 6292
guanylate kinase activity 6.3573E-4 4 1 1 6292
nucleotide kinase activity 3.8098E-3 4 6 1 6292
phosphotransferase activity, phosphate group as acceptor 6.9763E-3 4 11 1 6292
nucleobase, nucleoside, nucleotide kinase activity 7.6087E-3 4 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle