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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular bud scar 2.224E-3 7 2 1 6292
external encapsulating structure part 4.4437E-3 7 4 1 6292
cell wall part 4.4437E-3 7 4 1 6292
kinetochore microtubule 7.7654E-3 7 7 1 6292
spindle midzone 7.7654E-3 7 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

serine family amino acid metabolic process 3.6753E-4 7 27 2 6292
transsulfuration 1.1125E-3 7 1 1 6292
homocysteine metabolic process 1.1125E-3 7 1 1 6292
L-serine metabolic process 2.224E-3 7 2 1 6292
L-serine biosynthetic process 2.224E-3 7 2 1 6292
mitotic spindle disassembly 2.224E-3 7 2 1 6292
spindle disassembly 2.224E-3 7 2 1 6292
microtubule anchoring 3.3344E-3 7 3 1 6292
attachment of spindle microtubules to chromosome 3.3344E-3 7 3 1 6292
attachment of spindle microtubules to kinetochore 3.3344E-3 7 3 1 6292
cysteine metabolic process 4.4437E-3 7 4 1 6292
ubiquitin cycle 4.4437E-3 7 4 1 6292
purine base biosynthetic process 7.7654E-3 7 7 1 6292
homoserine metabolic process 7.7654E-3 7 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

O-phospho-L-serine:2-oxoglutarate aminotransferase activity 1.1125E-3 7 1 1 6292
ubiquitin activating enzyme activity 1.1125E-3 7 1 1 6292
cystathionine gamma-lyase activity 3.3344E-3 7 3 1 6292
small protein activating enzyme activity 7.7654E-3 7 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle