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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RAVE complex 9.5344E-4 2 3 1 6292
Swr1 complex 4.7627E-3 2 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

early endosome to late endosome transport 3.1786E-4 2 1 1 6292
histone exchange 3.1764E-3 2 10 1 6292
macromolecular complex subunit organization 3.2108E-3 2 357 2 6292
regulation of protein complex assembly 3.4937E-3 2 11 1 6292
regulation of cellular component biogenesis 5.7138E-3 2 18 1 6292
pH reduction 7.6148E-3 2 24 1 6292
intracellular pH reduction 7.6148E-3 2 24 1 6292
vacuolar acidification 7.6148E-3 2 24 1 6292
intracellular transport 7.7118E-3 2 553 2 6292
regulation of intracellular pH 7.9314E-3 2 25 1 6292
regulation of cellular pH 7.9314E-3 2 25 1 6292
ATP-dependent chromatin remodeling 8.248E-3 2 26 1 6292
establishment of localization in cell 9.0494E-3 2 599 2 6292
regulation of pH 9.1975E-3 2 29 1 6292
nucleosome organization 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone binding 4.4455E-3 2 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle