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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondria-nucleus signaling pathway 1.0611E-6 2 7 2 6292
transcription initiation from RNA polymerase II promoter 5.4619E-5 2 47 2 6292
transcription initiation 8.3521E-5 2 58 2 6292
intracellular signaling pathway 5.2022E-4 2 144 2 6292
protein complex assembly 6.0304E-4 2 155 2 6292
protein complex biogenesis 6.0304E-4 2 155 2 6292
signaling pathway 8.5067E-4 2 184 2 6292
signaling 1.598E-3 2 252 2 6292
macromolecular complex assembly 1.9877E-3 2 281 2 6292
transcription from RNA polymerase II promoter 2.8267E-3 2 335 2 6292
macromolecular complex subunit organization 3.2108E-3 2 357 2 6292
cellular component assembly 3.7349E-3 2 385 2 6292
transcription, DNA-dependent 6.3792E-3 2 503 2 6292
RNA biosynthetic process 6.5067E-3 2 508 2 6292
transcription 7.6839E-3 2 552 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription regulator activity 2.8947E-3 2 339 2 6292
transcription coactivator activity 6.6645E-3 2 21 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle