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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear membrane-endoplasmic reticulum network 3.9627E-3 3 232 2 6292
microsome 9.5071E-3 3 20 1 6292
vesicular fraction 9.5071E-3 3 20 1 6292
endoplasmic reticulum 9.6301E-3 3 364 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasomal protein catabolic process 1.2626E-6 3 69 3 6292
proteasomal ubiquitin-dependent protein catabolic process 1.2626E-6 3 69 3 6292
modification-dependent protein catabolic process 1.4956E-5 3 156 3 6292
ubiquitin-dependent protein catabolic process 1.4956E-5 3 156 3 6292
proteolysis involved in cellular protein catabolic process 1.5841E-5 3 159 3 6292
modification-dependent macromolecule catabolic process 1.7394E-5 3 164 3 6292
cellular protein catabolic process 1.9732E-5 3 171 3 6292
proteolysis 2.6264E-5 3 188 3 6292
protein catabolic process 2.6687E-5 3 189 3 6292
cellular macromolecule catabolic process 7.39E-5 3 265 3 6292
macromolecule catabolic process 1.0103E-4 3 294 3 6292
ER-associated protein catabolic process 1.1188E-4 3 39 2 6292
cellular catabolic process 2.85E-4 3 415 3 6292
catabolic process 4.8714E-4 3 496 3 6292
cellular protein metabolic process 4.9618E-3 3 1074 3 6292
cell death 5.2364E-3 3 11 1 6292
apoptosis 5.2364E-3 3 11 1 6292
death 5.2364E-3 3 11 1 6292
programmed cell death 5.2364E-3 3 11 1 6292
protein metabolic process 5.8726E-3 3 1136 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein phosphatase type 1 regulator activity 5.7116E-3 3 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle