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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

TRAPP complex 6.8153E-6 3 10 2 6292
cis-Golgi network 1.1809E-5 3 13 2 6292
Golgi apparatus part 1.051E-3 3 119 2 6292
1,3-beta-glucan synthase complex 1.4299E-3 3 3 1 6292
Golgi apparatus 2.1638E-3 3 171 2 6292
actin cap 5.7116E-3 3 12 1 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle-mediated transport 1.5647E-4 3 340 3 6292
ER to Golgi vesicle-mediated transport 5.114E-4 3 83 2 6292
1,3-beta-glucan biosynthetic process 1.9063E-3 3 4 1 6292
1,3-beta-glucan metabolic process 1.9063E-3 3 4 1 6292
Golgi vesicle transport 2.089E-3 3 168 2 6292
beta-glucan biosynthetic process 3.8101E-3 3 8 1 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
beta-glucan metabolic process 4.2857E-3 3 9 1 6292
localization 4.7701E-3 3 1060 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Ras guanyl-nucleotide exchange factor activity 2.3152E-5 3 18 2 6292
guanyl-nucleotide exchange factor activity 1.0615E-4 3 38 2 6292
small GTPase regulator activity 2.5779E-4 3 59 2 6292
GTPase regulator activity 5.2382E-4 3 84 2 6292
nucleoside-triphosphatase regulator activity 6.7013E-4 3 95 2 6292
1,3-beta-glucan synthase activity 1.4299E-3 3 3 1 6292
Rab guanyl-nucleotide exchange factor activity 2.8585E-3 3 6 1 6292
enzyme regulator activity 3.1616E-3 3 207 2 6292
UDP-glucosyltransferase activity 6.6614E-3 3 14 1 6292
glucosyltransferase activity 7.6106E-3 3 16 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle