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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 2.8931E-7 6 514 6 6292
cytosolic ribosome 9.1569E-7 6 101 4 6292
cytosolic part 1.9592E-6 6 122 4 6292
cytosolic small ribosomal subunit 4.0152E-6 6 38 3 6292
ribosomal subunit 9.9271E-6 6 183 4 6292
small ribosomal subunit 2.9233E-5 6 73 3 6292
cytosol 5.6745E-5 6 284 4 6292
ribosome 6.1624E-5 6 290 4 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
preribosome 4.1945E-4 6 34 2 6292
preribosome, small subunit precursor 5.7102E-3 6 6 1 6292
non-membrane-bounded organelle 6.2191E-3 6 959 4 6292
intracellular non-membrane-bounded organelle 6.2191E-3 6 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 4.3855E-8 6 376 6 6292
regulation of translation 1.3832E-5 6 57 3 6292
posttranscriptional regulation of gene expression 1.6989E-5 6 61 3 6292
regulation of cellular protein metabolic process 2.3597E-5 6 68 3 6292
cellular protein metabolic process 2.4449E-5 6 1074 6 6292
regulation of protein metabolic process 3.0457E-5 6 74 3 6292
protein metabolic process 3.4263E-5 6 1136 6 6292
cellular macromolecule biosynthetic process 4.4618E-5 6 1187 6 6292
macromolecule biosynthetic process 4.5072E-5 6 1189 6 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.8841E-5 6 13 2 6292
ribosomal small subunit assembly 6.8619E-5 6 14 2 6292
gene expression 7.1216E-5 6 1283 6 6292
cellular biosynthetic process 2.3689E-4 6 1567 6 6292
ribosomal small subunit biogenesis 2.4382E-4 6 26 2 6292
biosynthetic process 2.7052E-4 6 1602 6 6292
ribosomal subunit assembly 1.1004E-3 6 55 2 6292
maturation of SSU-rRNA 1.2657E-3 6 59 2 6292
ribosome assembly 1.4882E-3 6 64 2 6292
organelle assembly 1.7281E-3 6 69 2 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
ribosome biogenesis 2.9111E-3 6 346 3 6292
ribonucleoprotein complex assembly 3.0534E-3 6 92 2 6292
ribonucleoprotein complex biogenesis 3.641E-3 6 374 3 6292
rRNA processing 5.8384E-3 6 128 2 6292
regulation of gene expression 5.9803E-3 6 445 3 6292
regulation of macromolecule biosynthetic process 6.4094E-3 6 456 3 6292
rRNA metabolic process 6.6661E-3 6 137 2 6292
regulation of cellular biosynthetic process 7.0671E-3 6 472 3 6292
regulation of biosynthetic process 7.1095E-3 6 473 3 6292
regulation of macromolecule metabolic process 7.7652E-3 6 488 3 6292
regulation of primary metabolic process 8.9879E-3 6 514 3 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.3656E-9 6 212 6 6292
structural molecule activity 2.3452E-8 6 339 6 6292
rRNA binding 9.041E-5 6 16 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle